C0106 : Glyceric acid
Query Information
Cytoscape Web will replace the contents of this div with your graph.
ID C0106
Compound name Glyceric acid
External link   http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=GLYCERATE
Pathway Information photorespiration
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G16110 response regulator 2 response regulator 2, response
regulator 2		 0.78 0.32 -0.3
2 AT5G44210 erf domain protein 9 ERF DOMAIN PROTEIN- 9, ERF DOMAIN
PROTEIN 9, erf domain protein 9		 -0.74 0.3 -0.33
3 AT4G11370 RING-H2 finger A1A RING-H2 finger A1A 0.74 0.3 -0.32
4 AT3G02790 zinc finger (C2H2 type) family protein -0.74 0.3 -0.32
5 AT5G05420 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.73 0.31 -0.31
6 AT5G14920 Gibberellin-regulated family protein -0.73 0.31 -0.29
7 AT5G23580 calmodulin-like domain protein kinase 9 ARABIDOPSIS THALIANA
CALMODULIN-LIKE DOMAIN PROTEIN
KINASE 9, ATCPK12, calmodulin-like
domain protein kinase 9,
CALCIUM-DEPENDENT PROTEIN KINASE
12		 0.72 0.35 -0.32
8 AT3G53430 Ribosomal protein L11 family protein -0.72 0.33 -0.32
9 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 -0.72 0.34 -0.3
10 AT3G26710 cofactor assembly of complex C cofactor assembly of complex C -0.72 0.33 -0.3
11 AT1G72140 Major facilitator superfamily protein 0.72 0.31 -0.31
12 AT2G44570 glycosyl hydrolase 9B12 glycosyl hydrolase 9B12, glycosyl
hydrolase 9B12		 -0.71 0.33 -0.32
13 AT5G67210 Protein of unknown function (DUF579) IRX15-LIKE 0.71 0.32 -0.31
14 AT1G59640 BIG PETAL P BIG PETAL, BIG PETAL P, BIG PETAL
UB, ZCW32		 0.71 0.32 -0.3
15 AT5G02470 Transcription factor DP DPA -0.7 0.32 -0.32
16 AT1G63940 monodehydroascorbate reductase 6 monodehydroascorbate reductase 6 -0.7 0.34 -0.33
17 AT2G44310 Calcium-binding EF-hand family protein -0.7 0.3 -0.33
18 AT4G36830 GNS1/SUR4 membrane protein family HOS3-1 0.7 0.32 -0.31
19 AT1G24530 Transducin/WD40 repeat-like superfamily protein -0.7 0.32 -0.33
20 AT5G15200 Ribosomal protein S4 -0.69 0.29 -0.33
21 AT2G44060 Late embryogenesis abundant protein, group 2 -0.69 0.3 -0.32
22 AT4G04900 ROP-interactive CRIB motif-containing protein 10 ROP-interactive CRIB
motif-containing protein 10		 -0.69 0.3 -0.31
23 AT1G14820 Sec14p-like phosphatidylinositol transfer family protein -0.68 0.3 -0.31
24 AT3G44780 Cysteine proteinases superfamily protein -0.68 0.31 -0.34
25 AT3G49360 6-phosphogluconolactonase 2 6-phosphogluconolactonase 2 -0.68 0.34 -0.31
26 AT5G02540 NAD(P)-binding Rossmann-fold superfamily protein -0.68 0.31 -0.33
27 AT2G43130 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARA-4, ARA4, ATRAB11F, ARABIDOPSIS
RAB GTPASE HOMOLOG A5C, RABA5C		 -0.68 0.32 -0.28
28 AT5G57760 unknown protein; Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.32 -0.29
29 AT2G39400 alpha/beta-Hydrolases superfamily protein -0.68 0.3 -0.31
30 AT4G39770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
H		 0.68 0.3 -0.3
31 AT5G04120 Phosphoglycerate mutase family protein 0.68 0.32 -0.3
32 AT1G66820 glycine-rich protein -0.68 0.34 -0.31
33 AT1G19800 trigalactosyldiacylglycerol 1 ATP-binding cassette I14,
trigalactosyldiacylglycerol 1		 -0.68 0.3 -0.31
34 AT3G15880 WUS-interacting protein 2 TOPLESS-RELATED 4, WUS-interacting
protein 2		 0.68 0.34 -0.3
35 AT1G73830 BR enhanced expression 3 BR enhanced expression 3 -0.67 0.31 -0.32
36 AT4G01210 glycosyl transferase family 1 protein 0.67 0.31 -0.29
37 AT5G07620 Protein kinase superfamily protein -0.67 0.29 -0.3
38 AT4G16410 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF751 (InterPro:IPR008470); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.32 -0.3
39 AT3G19930 sugar transporter 4 SUGAR TRANSPORTER 4, sugar
transporter 4		 -0.67 0.33 -0.33
40 AT1G77260 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.32 -0.32
41 AT5G51770 Protein kinase superfamily protein 0.66 0.32 -0.33
42 AT5G42600 marneral synthase marneral synthase 0.66 0.32 -0.32
43 AT5G43520 Cysteine/Histidine-rich C1 domain family protein -0.66 0.3 -0.3
44 AT3G59810 Small nuclear ribonucleoprotein family protein -0.66 0.31 -0.32
45 AT3G23880 F-box and associated interaction domains-containing protein -0.66 0.34 -0.31
46 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.66 0.33 -0.31
47 AT1G15690 Inorganic H pyrophosphatase family protein ARABIDOPSIS THALIANA V-PPASE 3,
AtVHP1;1, AVP-3, AVP1, FUGU 5		 -0.66 0.32 -0.32
48 AT1G66220 Subtilase family protein -0.66 0.32 -0.31
49 AT5G38020 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.33 -0.3
50 AT1G74650 myb domain protein 31 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 31, ATY13, myb domain
protein 31		 -0.66 0.33 -0.32
51 AT5G53160 regulatory components of ABA receptor 3 PYR1-like 8, regulatory components
of ABA receptor 3		 -0.66 0.3 -0.29
52 AT2G33290 SU(VAR)3-9 homolog 2 ATSUVH2, SET DOMAIN-CONTAINING
PROTEIN 3, SU(VAR)3-9 homolog 2		 -0.65 0.31 -0.31
53 AT5G11270 overexpressor of cationic peroxidase 3 overexpressor of cationic
peroxidase 3		 -0.65 0.31 -0.29
54 AT5G46330 Leucine-rich receptor-like protein kinase family protein FLAGELLIN-SENSITIVE 2 -0.64 0.33 -0.32
55 AT5G37990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.29 -0.31
56 AT4G20010 plastid transcriptionally active 9 ORGANELLAR SINGLE-STRANDED DNA
BINDING PROTEIN 2, plastid
transcriptionally active 9		 -0.64 0.3 -0.31
57 AT5G28840 GDP-D-mannose 3',5'-epimerase GDP-D-mannose 3',5'-epimerase -0.64 0.29 -0.32
58 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.29 -0.31
59 AT5G55580 Mitochondrial transcription termination factor family
protein		 -0.64 0.32 -0.29
60 AT1G79110 zinc ion binding BOI-related gene 2 -0.64 0.31 -0.33
61 AT5G52190 Sugar isomerase (SIS) family protein -0.64 0.29 -0.31
62 AT2G39980 HXXXD-type acyl-transferase family protein -0.63 0.31 -0.3
63 AT1G26450 Carbohydrate-binding X8 domain superfamily protein 0.63 0.32 -0.34
64 AT1G70720 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.63 0.33 -0.3
65 AT3G24830 Ribosomal protein L13 family protein -0.63 0.32 -0.32
66 AT1G64590 NAD(P)-binding Rossmann-fold superfamily protein 0.63 0.31 -0.32
67 AT2G36835 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.63 0.34 -0.31
68 AT1G56180 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in
83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi
- 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123
(source: NCBI BLink).		 -0.63 0.31 -0.3
69 AT1G52540 Protein kinase superfamily protein 0.63 0.33 -0.3
70 AT1G09820 Pentatricopeptide repeat (PPR-like) superfamily protein -0.63 0.32 -0.33
71 AT5G66350 Lateral root primordium (LRP) protein-related SHORT INTERNODES -0.63 0.34 -0.31
72 AT1G68160 Protein of unknown function (DUF3755) 0.62 0.31 -0.35
73 AT1G67865 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67860.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.34 -0.31
74 AT2G16005 MD-2-related lipid recognition domain-containing protein 0.62 0.31 -0.31
75 AT1G22870 Protein kinase family protein with ARM repeat domain 0.61 0.3 -0.31
76 AT5G49900 Beta-glucosidase, GBA2 type family protein 0.61 0.32 -0.32
77 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 0.61 0.3 -0.3
78 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 0.61 0.33 -0.31
79 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 0.61 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0106 Glyceric acid D,L-Glyceric acid Glycerate photorespiration 1 0.32 -0.3 C0106
81 C0240 Stigmasterol - Stigmasterol plant sterol biosynthesis 0.72 0.45 -0.44 C0240
82 C0243 Succinic acid - Succinate flavonol biosynthesis,
glyoxylate cycle,
gibberellin biosynthesis III (early C-13 hydroxylation),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
aerobic respiration (alternative oxidase pathway),
gibberellin inactivation I (2beta-hydroxylation),
4-aminobutyrate degradation IV,
luteolin biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
leucodelphinidin biosynthesis,
glutamate degradation IV,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
succinate + a ubiquinone -> a ubiquinol + fumarate,
gibberellin biosynthesis II (early C-3 hydroxylation),
flavonoid biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
aerobic respiration (cytochrome c),
leucopelargonidin and leucocyanidin biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
scopoletin biosynthesis 		0.72 0.33 -0.3 C0243
83 C0174 MST_2370.2 - - - 0.7 0.42 -0.46
84 C0158 MST_1480.5 - - - 0.69 0.44 -0.45
85 C0141 Malic acid D,L-Malic acid (RS)-Malate sinapate ester biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
TCA cycle variation III (eukaryotic),
glyoxylate cycle,
aspartate degradation II,
TCA cycle variation V (plant),
gluconeogenesis I,
glycolate and glyoxylate degradation II 		0.67 0.32 -0.32 C0141
86 C0252 Threonic acid D,L-Threonic acid L-Threonate ascorbic acid degradation 0.66 0.47 -0.46 C0252