C0112 : Histidine
Query Information
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ID C0112
Compound name Histidine
External link   http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=HIS
Pathway Information tRNA charging,
histidine biosynthesis
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G07300 transposable element gene -0.66 0.31 -0.33
2 AT1G73700 MATE efflux family protein -0.64 0.34 -0.32
3 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.62 0.32 -0.33
4 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 -0.58 0.32 -0.35
5 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.57 0.31 -0.32
6 AT1G19200 Protein of unknown function (DUF581) 0.56 0.34 -0.32
7 AT3G11745 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.56 0.33 -0.31
8 AT3G61540 alpha/beta-Hydrolases superfamily protein 0.55 0.3 -0.31
9 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 -0.55 0.31 -0.3
10 AT1G79940 DnaJ / Sec63 Brl domains-containing protein ATERDJ2A 0.55 0.33 -0.31
11 AT3G27785 myb domain protein 118 ATMYB118, myb domain protein 118,
PLANT GROWTH ACTIVATOR 37		 -0.55 0.32 -0.32
12 AT1G31360 RECQ helicase L2 ARABIDOPSIS THALIANA RECQ 2,
MED34, RECQ helicase L2		 -0.54 0.32 -0.31
13 AT1G69560 myb domain protein 105 MYB DOMAIN PROTEIN 105, LATERAL
ORGAN FUSION 2, myb domain protein
105		 0.54 0.29 -0.35
14 AT5G39590 TLD-domain containing nucleolar protein 0.54 0.31 -0.3
15 AT5G22875 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.33 -0.29
16 AT2G30380 Plant protein of unknown function (DUF641) -0.53 0.31 -0.31
17 AT1G65880 benzoyloxyglucosinolate 1 benzoyloxyglucosinolate 1 -0.53 0.33 -0.32
18 AT5G40430 myb domain protein 22 myb domain protein 22, myb domain
protein 22		 -0.53 0.31 -0.31
19 AT1G49840 Protein of unknown function (DUF620) -0.53 0.3 -0.28
20 AT2G45840 Arabidopsis thaliana protein of unknown function (DUF821) 0.52 0.28 -0.3
21 AT2G27520 F-box and associated interaction domains-containing protein 0.52 0.31 -0.29
22 AT1G11630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.52 0.31 -0.29
23 AT1G18690 Galactosyl transferase GMA12/MNN10 family protein 0.52 0.36 -0.33
24 AT1G06070 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.51 0.31 -0.34
25 AT5G10140 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 25, FLC, FLOWERING
LOCUS C, FLOWERING LOCUS F		 -0.51 0.34 -0.33
26 AT4G22800 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.32 -0.32
27 AT1G60680 NAD(P)-linked oxidoreductase superfamily protein 0.51 0.3 -0.33
28 AT1G65950 Protein kinase superfamily protein -0.51 0.32 -0.34
29 AT1G33080 MATE efflux family protein -0.51 0.3 -0.31
30 AT2G16690 transposable element gene 0.51 0.3 -0.31
31 AT4G38940 Galactose oxidase/kelch repeat superfamily protein -0.51 0.31 -0.31
32 AT4G31630 Transcriptional factor B3 family protein 0.5 0.32 -0.31
33 AT2G22060 BEST Arabidopsis thaliana protein match is: Galactose
oxidase/kelch repeat superfamily protein
(TAIR:AT2G22030.1); Has 148 Blast hits to 148 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.49 0.3 -0.32
34 AT4G00760 pseudo-response regulator 8 pseudo-response regulator 8,
PSEUDO-RESPONSE REGULATOR 8		 -0.49 0.34 -0.3
35 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.48 0.33 -0.3
36 AT1G23650 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.3 -0.31
37 AT2G20830 transferases;folic acid binding -0.47 0.33 -0.3
38 AT4G25120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
RAD SIX-SCREEN MUTANT 2,
SUPPRESSOR OF RAD SIX-SCREEN
MUTANT 2		 -0.47 0.32 -0.3
39 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.47 0.3 -0.32
40 AT3G42550 Eukaryotic aspartyl protease family protein 0.47 0.3 -0.31
41 AT1G08730 Myosin family protein with Dil domain MYOSIN XI C, XIC -0.47 0.32 -0.31
42 AT1G04180 YUCCA 9 YUCCA 9 0.47 0.31 -0.31
43 AT4G11020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G23870.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.47 0.32 -0.3
44 AT2G44240 Protein of Unknown Function (DUF239) 0.47 0.29 -0.33
45 AT4G33925 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 suppressor of sni1 2 -0.46 0.32 -0.31
46 AT5G16850 telomerase reverse transcriptase telomerase reverse transcriptase,
telomerase reverse transcriptase		 -0.46 0.3 -0.34
47 AT3G04460 peroxin-12 ABERRANT PEROXISOME MORPHOLOGY 4,
PEROXIN-12, peroxin-12		 -0.46 0.34 -0.32
48 AT1G48800 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.46 0.3 -0.32
49 AT2G39910 ARM repeat superfamily protein -0.45 0.31 -0.31
50 AT3G10950 Zinc-binding ribosomal protein family protein -0.45 0.33 -0.31
51 AT3G05370 receptor like protein 31 receptor like protein 31, receptor
like protein 31		 -0.43 0.3 -0.32
52 AT3G43770 transposable element gene -0.43 0.33 -0.3
53 AT5G47470 Nodulin MtN21 /EamA-like transporter family protein -0.43 0.34 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
54 C0112 Histidine L-Histidine L-Histidine tRNA charging,
histidine biosynthesis 		1 0.3 -0.32 C0112
55 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.81 0.48 -0.43 C0088
56 C0165 MST_1688.6 - - - 0.8 0.44 -0.46
57 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.78 0.44 -0.43 C0262
58 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.77 0.43 -0.47 C0261
59 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		-0.74 0.45 -0.46 C0010
60 C0140 Lysine L-Lysine L-Lysine lysine degradation II,
tRNA charging,
lysine biosynthesis VI,
lysine degradation I 		0.74 0.33 -0.31 C0140
61 C0160 MST_1509.5 - - - 0.73 0.5 -0.46
62 C0163 MST_1589.2 - - - 0.73 0.47 -0.45
63 C0006 β-Homothreonine L-β-Homothreonine - - 0.73 0.48 -0.44
64 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.73 0.47 -0.44 C0075
65 C0069 Citrulline - Citrulline citrulline-nitric oxide cycle,
citrulline biosynthesis,
nitric oxide biosynthesis I (in plants),
urea cycle,
citrulline degradation,
arginine biosynthesis II (acetyl cycle),
arginine biosynthesis I 		0.72 0.29 -0.32 C0069
66 C0164 MST_1596.8 - - - 0.72 0.46 -0.44
67 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.72 0.43 -0.44 C0073
68 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.71 0.46 -0.46 C0091
69 C0161 MST_1566.3 - - - 0.68 0.45 -0.45
70 C0023 1,6-Anhydro-β-glucose 1,6-Anhydro-β-D-glucose Levoglucosan - 0.68 0.43 -0.45 C0023
71 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		0.67 0.31 -0.32 C0066
72 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		0.67 0.43 -0.45 C0015
73 C0058 Arginine D,L-Arginine L-Arginine arginine degradation VI (arginase 2 pathway),
arginine degradation I (arginase pathway),
arginine biosynthesis I,
putrescine biosynthesis II,
nitric oxide biosynthesis I (in plants),
citrulline biosynthesis,
putrescine biosynthesis I,
tRNA charging,
arginine biosynthesis II (acetyl cycle),
citrulline-nitric oxide cycle,
urea cycle,
L-Ndelta-acetylornithine biosynthesis 		0.65 0.33 -0.31 C0058
74 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		0.6 0.3 -0.33 C0052
75 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		0.58 0.31 -0.33 C0259
76 C0216 Proline L-Proline L-Proline proline degradation II,
arginine degradation VI (arginase 2 pathway),
L-Ndelta-acetylornithine biosynthesis,
tRNA charging,
citrulline biosynthesis,
proline biosynthesis III 		0.57 0.32 -0.33 C0216
77 C0113 Histidinol - Histidinol histidine biosynthesis 0.57 0.33 -0.3 C0113
78 C0062 Betain - - - 0.56 0.33 -0.29
79 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		0.54 0.31 -0.33 C0061
80 C0104 Glutathione - Glutathione glucosinolate biosynthesis from tryptophan,
glutathione redox reactions I,
glutathione degradation,
gamma-glutamyl cycle (plant pathway),
indole glucosinolate breakdown (active in intact plant cell),
selenate reduction,
glutathione redox reactions II,
glucosinolate biosynthesis from trihomomethionine,
ascorbate glutathione cycle,
glucosinolate biosynthesis from pentahomomethionine,
camalexin biosynthesis,
glucosinolate biosynthesis from homomethionine,
glucosinolate biosynthesis from phenylalanine,
methylglyoxal degradation I,
sulfate reduction II (assimilatory),
glucosinolate biosynthesis from dihomomethionine,
indole glucosinolate breakdown (insect chewing induced),
glutathione biosynthesis,
formaldehyde oxidation II (glutathione-dependent),
glutathione-mediated detoxification II,
glucosinolate biosynthesis from tetrahomomethionine,
glucosinolate biosynthesis from hexahomomethionine,
gamma-glutamyl cycle 		0.53 0.33 -0.32 C0104
81 C0191 Ornithine D,L-Ornithine L-Ornithine arginine degradation I (arginase pathway),
urea cycle,
ornithine biosynthesis,
proline biosynthesis III,
arginine degradation VI (arginase 2 pathway),
arginine biosynthesis II (acetyl cycle),
citrulline biosynthesis,
L-Ndelta-acetylornithine biosynthesis,
arginine biosynthesis I,
citrulline degradation 		0.51 0.32 -0.32 C0191