4.0:Information of module
GST 4 h (leaf)
In comparison with root callus inducing medium 96 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0002376 immune system process BP 3.216e-35
GO:0006952 defense response BP 2.908e-33
GO:1901698 response to nitrogen compound BP 1.362e-32
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009657 plastid organization BP 2.499e-29
GO:0009658 chloroplast organization BP 3.736e-19
GO:0016556 mRNA modification BP 1.885e-17
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
GST 4 h (leaf)		 Log2 signal ratio
root callus inducing medium 96 h
1 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] 0.991 -0.374
2 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.766 0.125
3 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.742 -0.472
4 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.704 -1.045
5 256181_at AT1G51820 [Leucine-rich repeat protein kinase family protein] 0.697 -0.146
6 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.629 -0.367
7 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] 0.615 0.021
8 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 0.606 -1.086
9 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 0.601 -0.744
10 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.600 -0.519
11 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.597 -0.512
12 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 0.571 -0.662
13 252045_at AT3G52450 AtPUB22, PUB22, plant U-box 22 0.565 -0.606
14 262324_at AT1G64170 ATCHX16, cation/H+ exchanger 16, CHX16, cation/H+ exchanger 16 0.544 0.198
15 256177_at AT1G51620 [Protein kinase superfamily protein] 0.542 -0.357
16 246993_at AT5G67450 AZF1, zinc-finger protein 1, ZF1, zinc-finger protein 1 0.538 -0.432
17 258606_at AT3G02840 [ARM repeat superfamily protein] 0.524 -1.431
18 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.518 -0.123
19 254447_at AT4G20860 [FAD-binding Berberine family protein] 0.505 -0.589
20 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 0.499 -0.112
21 261198_at AT1G12940 ATNRT2.5, nitrate transporter2.5, NRT2.5, nitrate transporter2.5 0.497 -0.041
22 266247_at AT2G27660 [Cysteine/Histidine-rich C1 domain family protein] 0.493 -0.669
23 255596_at AT4G01720 AtWRKY47, WRKY47 0.485 -0.045
24 252977_at AT4G38560 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.478 0.007
25 246238_at AT4G36670 AtPLT6, AtPMT6, PLT6, polyol transporter 6, PMT6, polyol/monosaccharide transporter 6 0.472 -0.106
26 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 0.466 -0.676
27 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.460 -0.700
28 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.444 -0.766
29 264635_at AT1G65500 unknown 0.441 -0.652
30 260754_at AT1G49000 unknown 0.436 0.289
31 250666_at AT5G07100 WRKY26, WRKY DNA-binding protein 26 0.426 -0.396
32 257264_at AT3G22060 [Receptor-like protein kinase-related family protein] 0.424 0.260
33 254524_at AT4G20000 [VQ motif-containing protein] 0.416 -0.652
34 263182_at AT1G05575 unknown 0.410 -0.891
35 252862_at AT4G39830 [Cupredoxin superfamily protein] 0.409 -0.374
36 259841_at AT1G52200 [PLAC8 family protein] 0.408 -0.626
37 264757_at AT1G61360 [S-locus lectin protein kinase family protein] 0.399 -0.249
38 251970_at AT3G53150 UGT73D1, UDP-glucosyl transferase 73D1 0.394 -0.514
39 252572_at AT3G45290 ATMLO3, MILDEW RESISTANCE LOCUS O 3, MLO3, MILDEW RESISTANCE LOCUS O 3 0.383 -0.121
40 256442_at AT3G10930 unknown 0.380 -0.622
41 265853_at AT2G42360 [RING/U-box superfamily protein] 0.380 -0.239
42 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.378 0.236
43 256969_at AT3G21080 [ABC transporter-related] 0.374 -0.050
44 249125_at AT5G43450 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.374 -0.357
45 255059_at AT4G09420 [Disease resistance protein (TIR-NBS class)] 0.372 -0.250
46 258209_at AT3G14060 unknown 0.371 0.402
47 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.371 -0.300
48 260239_at AT1G74360 [Leucine-rich repeat protein kinase family protein] 0.370 -0.668
49 254453_at AT4G21120 AAT1, amino acid transporter 1, CAT1, CATIONIC AMINO ACID TRANSPORTER 1 0.367 0.222
50 254060_at AT4G25350 SHB1, SHORT HYPOCOTYL UNDER BLUE1 0.365 -0.391
51 260623_at AT1G08090 ACH1, ATNRT2.1, NITRATE TRANSPORTER 2.1, ATNRT2:1, nitrate transporter 2:1, LIN1, LATERAL ROOT INITIATION 1, NRT2, NITRATE TRANSPORTER 2, NRT2.1, NITRATE TRANSPORTER 2.1, NRT2:1, nitrate transporter 2:1, NRT2;1AT 0.356 -0.457
52 266231_at AT2G02220 ATPSKR1, PHYTOSULFOKIN RECEPTOR 1, PSKR1, phytosulfokin receptor 1 0.351 -0.242
53 256799_at AT3G18560 unknown 0.339 -0.357
54 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.339 -0.112
55 253173_at AT4G35110 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.338 -0.530
56 253887_at AT4G27730 ATOPT6, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 6, OPT6, oligopeptide transporter 1 0.330 0.296
57 264574_at AT1G05300 ZIP5, zinc transporter 5 precursor 0.330 -0.037
58 254243_at AT4G23210 CRK13, cysteine-rich RLK (RECEPTOR-like protein kinase) 13 0.330 -0.121
59 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 0.327 -0.424
60 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.326 0.520
61 265656_at AT2G13820 AtXYP2, XYP2, xylogen protein 2 -0.280 0.061
62 252073_at AT3G51750 unknown -0.225 0.556
63 245688_at AT1G28290 AGP31, arabinogalactan protein 31 -0.196 -0.002
64 247943_at AT5G57170 [Tautomerase/MIF superfamily protein] -0.193 0.043
65 246303_at AT3G51870 [Mitochondrial substrate carrier family protein] -0.189 0.040
66 265828_at AT2G14520 unknown -0.185 -0.049
67 252433_at AT3G47560 [alpha/beta-Hydrolases superfamily protein] -0.175 0.167
68 248420_at AT5G51560 [Leucine-rich repeat protein kinase family protein] -0.174 0.372
69 261975_at AT1G64640 AtENODL8, ENODL8, early nodulin-like protein 8 -0.173 -0.195
70 248075_at AT5G55740 CRR21, chlororespiratory reduction 21 -0.172 0.156
71 263913_at AT2G36570 PXC1, PXY/TDR-correlated 1 -0.171 0.180
72 262370_at AT1G73090 unknown -0.165 0.315
73 257856_at AT3G12930 [Lojap-related protein] -0.165 0.097
74 252362_at AT3G48500 PDE312, PIGMENT DEFECTIVE 312, PTAC10, PLASTID TRANSCRIPTIONALLY ACTIVE 10, TAC10 -0.160 0.182
75 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 -0.158 0.547
76 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 -0.157 -0.031
77 262086_at AT1G56050 [GTP-binding protein-related] -0.155 0.028
78 262181_at AT1G78060 [Glycosyl hydrolase family protein] -0.152 0.178
79 251119_at AT3G63510 [FMN-linked oxidoreductases superfamily protein] -0.150 0.056
80 256792_at AT3G22150 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.149 0.241
81 257891_at AT3G17170 RFC3, REGULATOR OF FATTY-ACID COMPOSITION 3 -0.147 0.332
82 260388_at AT1G74070 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] -0.147 -0.145
83 266285_at AT2G29180 unknown -0.145 0.073
84 246877_at AT5G26150 [protein kinase family protein] -0.144 -0.113
85 247962_at AT5G56580 ANQ1, ARABIDOPSIS NQK1, ATMKK6, ARABIDOPSIS THALIANA MAP KINASE KINASE 6, MKK6, MAP kinase kinase 6 -0.142 0.308
86 267497_at AT2G30540 [Thioredoxin superfamily protein] -0.142 -0.320
87 249033_at AT5G44920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.141 -0.267
88 259172_at AT3G03630 CS26, cysteine synthase 26 -0.139 0.284
89 254011_at AT4G26370 [antitermination NusB domain-containing protein] -0.139 0.251
90 267123_at AT2G23560 ATMES7, ARABIDOPSIS THALIANA METHYL ESTERASE 7, MES7, methyl esterase 7 -0.138 -0.267
91 264963_at AT1G60600 ABC4, ABERRANT CHLOROPLAST DEVELOPMENT 4 -0.138 0.068
92 257667_at AT3G20440 BE1, BRANCHING ENZYME 1, EMB2729, EMBRYO DEFECTIVE 2729 -0.138 0.119
93 252410_at AT3G47450 ATNOA1, ATNOS1, NOA1, NO ASSOCIATED 1, NOS1, NITRIC OXIDE SYNTHASE 1, RIF1, RESISTANT TO INHIBITION WITH FOSMIDOMYCIN 1 -0.137 0.171
94 256612_at AT3G29280 unknown -0.137 0.242
95 251554_at AT3G58670 unknown -0.135 -0.072
96 260343_at AT1G69200 FLN2, fructokinase-like 2 -0.135 0.361
97 251008_at AT5G02710 unknown -0.135 0.160
98 259015_at AT3G07350 unknown -0.135 -0.783
99 258216_at AT3G17980 AtC2, Arabidopsis thaliana C2 domain, AtGAP1, homolog of OsGAP1, C2, C2 domain -0.132 -0.178
100 257903_at AT3G28460 [methyltransferases] -0.130 0.191
101 250371_at AT5G11450 PPD5, PsbP domain protein 5 -0.129 0.039
102 259881_at AT1G76820 [eukaryotic translation initiation factor 2 (eIF-2) family protein] -0.129 -0.063
103 262897_at AT1G59840 CCB4, cofactor assembly of complex C -0.129 -0.006
104 262359_at AT1G73066 [Leucine-rich repeat family protein] -0.128 -0.184
105 248065_at AT5G55580 [Mitochondrial transcription termination factor family protein] -0.127 0.182
106 258634_at AT3G08000 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.127 0.051
107 250739_at AT5G05740 ATEGY2, EGY2, ethylene-dependent gravitropism-deficient and yellow-green-like 2 -0.127 0.143
108 254716_at AT4G13560 UNE15, unfertilized embryo sac 15 -0.125 -0.194
109 264954_at AT1G77060 [Phosphoenolpyruvate carboxylase family protein] -0.124 -0.247
110 251730_at AT3G56330 [N2,N2-dimethylguanosine tRNA methyltransferase] -0.122 0.201
111 253283_at AT4G34090 unknown -0.121 0.196
112 259812_at AT1G49840 unknown -0.120 0.117
113 247640_at AT5G60610 [F-box/RNI-like superfamily protein] -0.120 -0.101
114 266926_at AT2G46000 unknown -0.120 -0.100
115 267562_at AT2G39670 [Radical SAM superfamily protein] -0.120 0.199
116 258802_at AT3G04650 [FAD/NAD(P)-binding oxidoreductase family protein] -0.119 0.126
117 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.119 0.508
118 247134_at AT5G66230 [Chalcone-flavanone isomerase family protein] -0.119 0.328
119 264184_at AT1G54790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.119 -0.309