4.0:Information of module
35S::HRE1 Aerobic
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009409 response to cold BP 6.878e-03
GO:0009415 response to water BP 8.276e-03
GO:0048519 negative regulation of biological proces... BP 8.450e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015780 nucleotide-sugar transport BP 8.194e-04
GO:0071370 cellular response to gibberellin stimulu... BP 2.335e-03
GO:0006879 cellular iron ion homeostasis BP 4.239e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S::HRE1 Aerobic		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 260926_at AT1G21360 GLTP2, glycolipid transfer protein 2 0.250 -1.065
2 267254_at AT2G23030 SNRK2-9, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9, SNRK2.9, SNF1-related protein kinase 2.9 0.245 -0.469
3 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.189 0.206
4 258203_at AT3G13950 unknown 0.188 -0.269
5 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.169 -0.800
6 258339_at AT3G16120 [Dynein light chain type 1 family protein] 0.159 -0.832
7 264217_at AT1G60190 AtPUB19, PUB19, plant U-box 19 0.148 -0.936
8 257460_at AT1G75580 SAUR51, SMALL AUXIN UPREGULATED RNA 51 0.147 1.099
9 255511_at AT4G02075 PIT1, pitchoun 1 0.146 0.497
10 257280_at AT3G14440 ATNCED3, NCED3, nine-cis-epoxycarotenoid dioxygenase 3, SIS7, SUGAR INSENSITIVE 7, STO1, SALT TOLERANT 1 0.146 -0.848
11 252988_at AT4G38410 [Dehydrin family protein] 0.138 0.198
12 265496_at AT2G15700 [copia-like retrotransposon family, has a 2.4e-308 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 0.137 -0.657
13 260422_at AT1G69630 [F-box/RNI-like superfamily protein] 0.135 -1.188
14 257323_at ATMG01200 ORF294 0.130 0.011
15 266827_at AT2G22920 SCPL12, serine carboxypeptidase-like 12 0.129 -0.424
16 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.122 -0.298
17 256527_at AT1G66100 [Plant thionin] 0.119 -1.311
18 250585_at AT5G07620 [Protein kinase superfamily protein] 0.115 0.201
19 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] 0.115 -0.263
20 263851_at AT2G04460 unknown 0.114 0.239
21 248535_at AT5G50120 [Transducin/WD40 repeat-like superfamily protein] 0.112 0.093
22 245345_at AT4G16640 [Matrixin family protein] 0.108 -1.019
23 249362_at AT5G40550 AtSGF29b, SGF29b, SaGa associated Factor 29 b 0.107 -0.380
24 262255_at AT1G53790 [F-box and associated interaction domains-containing protein] 0.102 -1.137
25 254816_at AT4G12440 APT4, adenine phosphoribosyl transferase 4 0.100 -0.800
26 247797_at AT5G58780 AtcPT5, AtHEPS, cPT5, cis -prenyltransferase 5, HEPS, heptaprenyl diphosphate synthase 0.100 -1.274
27 256131_at AT1G13600 AtbZIP58, basic leucine-zipper 58, bZIP58, basic leucine-zipper 58 0.100 -0.656
28 262047_at AT1G80160 GLYI7, glyoxylase I 7 0.098 -0.795
29 245702_at AT5G04220 ATSYTC, NTMC2T1.3, NTMC2TYPE1.3, SYT3, synaptotagmin 3, SYTC 0.098 -0.560
30 246262_at AT1G31790 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.097 -0.315
31 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 0.097 0.121
32 259827_at AT1G72270 unknown 0.094 -0.634
33 265907_at AT2G25650 [DNA-binding storekeeper protein-related transcriptional regulator] 0.094 -0.551
34 266640_at AT2G35585 unknown 0.092 -0.570
35 248367_at AT5G52360 ADF10, actin depolymerizing factor 10 -0.242 -1.334
36 256416_at AT3G11050 ATFER2, ferritin 2, FER2, ferritin 2 -0.179 -0.250
37 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] -0.173 -0.686
38 267585_s_at AT2G42090 ACT9, actin 9 -0.172 -1.010
39 264601_at AT1G04540 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.167 -0.767
40 265052_at AT1G51990 [O-methyltransferase family protein] -0.161 -0.262
41 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.159 -0.386
42 257629_at AT3G26140 [Cellulase (glycosyl hydrolase family 5) protein] -0.156 0.370
43 253707_at AT4G29200 [Beta-galactosidase related protein] -0.155 0.236
44 264166_at AT1G65370 [TRAF-like family protein] -0.155 -0.042
45 247648_at AT5G60020 ATLAC17, LAC17, laccase 17 -0.153 0.493
46 262998_at AT1G54280 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.153 -0.821
47 254660_at AT4G18250 [receptor serine/threonine kinase, putative] -0.148 -0.214
48 256096_at AT1G13650 unknown -0.148 -0.683
49 261998_at AT1G33813 [copia-like retrotransposon family, has a 5.8e-39 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.145 -0.411
50 246937_at AT5G25370 PLDALPHA3, phospholipase D alpha 3 -0.140 0.494
51 263794_at AT2G24620 [S-locus glycoprotein family protein] -0.138 -1.047
52 264194_at AT1G22720 [Protein kinase superfamily protein] -0.137 0.083
53 266263_at AT2G27570 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.136 -0.939
54 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 -0.131 -0.577
55 250889_at AT5G04500 [glycosyltransferase family protein 47] -0.129 -0.289
56 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 -0.128 -0.552
57 260019_at AT1G41825 [gypsy-like retrotransposon family (Athila), has a 1.9e-98 P-value blast match to gb|AAL06422.1|AF378081_1 reverse transcriptase (Athila4) (Arabidopsis thaliana) (Gypsy_Ty3-family)] -0.128 -1.257
58 260562_at AT2G43850 [Integrin-linked protein kinase family] -0.126 -0.936
59 259573_at AT1G20390 [gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] -0.124 -1.048
60 249830_at AT5G23300 PYRD, pyrimidine d -0.124 0.011
61 247772_at AT5G58610 [PHD finger transcription factor, putative] -0.124 -0.036
62 263290_at AT2G10930 unknown -0.123 -0.562
63 262937_at AT1G79560 EMB1047, EMBRYO DEFECTIVE 1047, EMB156, EMBRYO DEFECTIVE 156, EMB36, EMBRYO DEFECTIVE 36, FTSH12, FTSH protease 12 -0.121 0.318
64 249019_at AT5G44780 MORF4, multiple organellar RNA editing factor 4 -0.121 -0.199
65 255124_at AT4G08560 APUM15, pumilio 15, PUM15, pumilio 15 -0.120 -0.640
66 262266_at AT1G42450 [Mutator-like transposase family, has a 4.3e-96 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -0.118 -0.468
67 258305_at AT3G30650 unknown -0.117 -1.165