4.0:Information of module
phyB mutant 16C 10hrs
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0071368 cellular response to cytokinin stimulus BP 3.913e-03
GO:0009735 response to cytokinin BP 1.241e-02
GO:0009117 nucleotide metabolic process BP 1.295e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009311 oligosaccharide metabolic process BP 7.695e-03
GO:0009846 pollen germination BP 1.084e-02
GO:0006551 leucine metabolic process BP 2.369e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
phyB mutant 16C 10hrs		 Log2 signal ratio
Leafminer damaged seedlings
1 254452_at AT4G21100 DDB1B, damaged DNA binding protein 1B 0.860 -0.120
2 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 0.249 0.068
3 246085_at AT5G20540 ATBRXL4, BREVIS RADIX-like 4, BRX-LIKE4, BRXL4, BREVIS RADIX-like 4 0.222 -0.334
4 252574_at AT3G45430 LecRK-I.5, L-type lectin receptor kinase I.5 0.216 -0.119
5 246235_at AT4G36830 HOS3-1 0.210 0.215
6 257331_at ATMG01330 ORF107H 0.204 -0.021
7 265252_at AT2G01980 ATNHX7, ARABIDOPSIS NA+/H+ ANTIPORTER 7, ATSOS1, ARABIDOPSIS SALT OVERLY SENSITIVE 1, SOS1, SALT OVERLY SENSITIVE 1 0.202 -0.133
8 263794_at AT2G24620 [S-locus glycoprotein family protein] 0.195 0.006
9 264805_at AT1G08600 ATRX, CHR20 0.193 -0.134
10 267343_at AT2G44260 unknown 0.190 -0.073
11 266415_at AT2G38530 cdf3, cell growth defect factor-3, LP2, LTP2, lipid transfer protein 2 0.188 0.188
12 249622_at AT5G37550 unknown 0.186 -0.044
13 254074_at AT4G25490 ATCBF1, CBF1, C-repeat/DRE binding factor 1, DREB1B, DRE BINDING PROTEIN 1B 0.170 0.333
14 250685_at AT5G06670 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.159 -0.302
15 248864_at AT5G46760 MYC3 0.156 0.086
16 252851_at AT4G40080 [ENTH/ANTH/VHS superfamily protein] -0.215 -0.008
17 254705_at AT4G17870 PYR1, PYRABACTIN RESISTANCE 1, RCAR11, regulatory component of ABA receptor 11 -0.214 -0.170
18 251188_at AT3G62730 unknown -0.207 0.051
19 267455_at AT2G33760 [Pentatricopeptide repeat (PPR) superfamily protein] -0.207 0.025
20 253967_at AT4G26550 [Got1/Sft2-like vescicle transport protein family] -0.201 -0.033
21 248769_at AT5G47730 [Sec14p-like phosphatidylinositol transfer family protein] -0.198 0.295
22 262390_at AT1G49260 unknown -0.193 0.031
23 265611_at AT2G25510 unknown -0.184 -0.009
24 262667_at AT1G62810 CuAO1, COPPER AMINE OXIDASE1 -0.180 0.200
25 264889_at AT1G23050 hydroxyproline-rich glycoprotein family protein -0.175 -0.024
26 263038_at AT1G23270 unknown -0.170 -0.028
27 256361_at AT1G66520 pde194, pigment defective 194 -0.168 -0.170
28 267588_at AT2G42060 [Cysteine/Histidine-rich C1 domain family protein] -0.156 0.131
29 257829_at AT3G26680 ATSNM1, SENSITIVE TO NITROGEN MUSTARD 1, SNM1, SENSITIVE TO NITROGEN MUSTARD 1 -0.153 0.058