4.0:Information of module
sex4-3
In comparison with aerial organ callus inducing medium 96 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006084 acetyl-CoA metabolic process BP 5.426e-05
GO:0006637 acyl-CoA metabolic process BP 6.228e-05
GO:0035383 thioester metabolic process BP 6.228e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009631 cold acclimation BP 2.984e-03
GO:0048582 positive regulation of post-embryonic de... BP 8.020e-03
GO:0051240 positive regulation of multicellular org... BP 1.096e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sex4-3		 Log2 signal ratio
aerial organ callus inducing medium 96 h
1 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.396 -0.053
2 260126_at AT1G36370 SHM7, serine hydroxymethyltransferase 7 0.245 -0.067
3 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.244 0.089
4 265116_at AT1G62480 [Vacuolar calcium-binding protein-related] 0.238 0.104
5 256324_at AT1G66760 [MATE efflux family protein] 0.229 -0.251
6 257895_at AT3G16950 LPD1, lipoamide dehydrogenase 1, ptlpd1 0.222 -0.113
7 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 0.218 0.368
8 259095_at AT3G05020 ACP, ACYL CARRIER PROTEIN, ACP1, acyl carrier protein 1 0.212 -0.009
9 248772_at AT5G47800 [Phototropic-responsive NPH3 family protein] 0.202 -0.579
10 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 0.200 -0.235
11 258419_at AT3G16670 [Pollen Ole e 1 allergen and extensin family protein] 0.197 0.084
12 265656_at AT2G13820 AtXYP2, XYP2, xylogen protein 2 0.193 0.225
13 249427_at AT5G39850 [Ribosomal protein S4] 0.177 0.121
14 251004_at AT5G02720 unknown 0.176 -0.132
15 263046_at AT2G05380 GRP3S, glycine-rich protein 3 short isoform 0.174 0.060
16 251722_at AT3G56200 [Transmembrane amino acid transporter family protein] 0.173 0.004
17 265511_at AT2G05540 [Glycine-rich protein family] 0.162 0.088
18 258897_at AT3G05730 [LOCATED IN: endomembrane system] 0.160 -0.266
19 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] 0.156 0.110
20 251736_at AT3G56130 [biotin/lipoyl attachment domain-containing protein] 0.151 -0.098
21 263515_at AT2G21640 unknown 0.147 0.006
22 257066_at AT3G18280 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.144 0.266
23 251638_at AT3G57490 [Ribosomal protein S5 family protein] 0.144 0.067
24 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] 0.143 0.015
25 260824_at AT1G06720 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.141 0.319
26 258024_at AT3G19360 [Zinc finger (CCCH-type) family protein] 0.141 -0.047
27 251114_at AT5G01380 [Homeodomain-like superfamily protein] 0.138 0.153
28 254525_at AT4G19580 [DNAJ heat shock N-terminal domain-containing protein] 0.134 0.004
29 245082_at AT2G23270 unknown 0.131 -0.057
30 262719_at AT1G43590 unknown -0.344 0.033
31 266780_at AT2G29110 ATGLR2.8, glutamate receptor 2.8, GLR2.8, GLR2.8, glutamate receptor 2.8 -0.322 -0.006
32 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 -0.258 0.118
33 259433_at AT1G01570 [FUNCTIONS IN: transferase activity, transferring glycosyl groups] -0.216 0.005
34 266807_at AT2G29920 unknown -0.179 -0.122
35 267445_at AT2G33680 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.176 -0.027
36 248015_at AT5G56370 [F-box/RNI-like/FBD-like domains-containing protein] -0.176 -0.173
37 267509_at AT2G45660 AGL20, AGAMOUS-like 20, ATSOC1, SUPPRESSOR OF OVEREXPRESSION OF CO 1, SOC1, SUPPRESSOR OF OVEREXPRESSION OF CO 1 -0.164 -0.136
38 267035_at AT2G38400 AGT3, alanine:glyoxylate aminotransferase 3 -0.161 0.284
39 250659_at AT5G07050 UMAMIT9, Usually multiple acids move in and out Transporters 9 -0.157 -0.082
40 249518_at AT5G38610 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.155 0.385
41 255333_at AT4G04410 [copia-like retrotransposon family, has a 1.7e-176 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.154 -0.021
42 266230_at AT2G28830 AtPUB12, PUB12, PLANT U-BOX 12 -0.153 0.068
43 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 -0.151 1.372
44 265978_at AT2G11140 [copia-like retrotransposon family, has a 1.0e-71 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.150 0.053
45 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] -0.149 -0.011
46 247940_at AT5G57190 PSD2, phosphatidylserine decarboxylase 2 -0.146 -0.042
47 255899_at AT1G17970 [RING/U-box superfamily protein] -0.145 -0.336
48 262748_at AT1G28610 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.141 -0.147
49 263384_at AT2G40130 SMXL8, SMAX1-like 8 -0.140 -0.059
50 250901_at AT5G03530 ATRAB, ATRAB ALPHA, ATRAB18B, ATRABC2A, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG C2A, RABC2A, RAB GTPase homolog C2A -0.136 0.167
51 265146_at AT1G51210 [UDP-Glycosyltransferase superfamily protein] -0.134 0.010
52 259172_at AT3G03630 CS26, cysteine synthase 26 -0.130 -0.446
53 261531_at AT1G63490 [transcription factor jumonji (jmjC) domain-containing protein] -0.128 -0.072
54 251577_at AT3G58350 RTM3, RESTRICTED TEV MOVEMENT 3 -0.128 -0.162
55 258752_at AT3G09520 ATEXO70H4, exocyst subunit exo70 family protein H4, EXO70H4, exocyst subunit exo70 family protein H4 -0.128 -0.104
56 265836_at AT2G14570 unknown -0.128 -0.046
57 249365_at AT5G40600 unknown -0.126 0.007