4.0:Information of module
phyABDE 4-day dark- 2 hours Rc50
In comparison with WT no Pi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0022900 electron transport chain BP 4.160e-03
GO:0009736 cytokinin-activated signaling pathway BP 6.805e-03
GO:0015979 photosynthesis BP 7.089e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009741 response to brassinosteroid BP 1.191e-03
GO:0046916 cellular transition metal ion homeostasi... BP 3.142e-03
GO:0006875 cellular metal ion homeostasis BP 8.378e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
phyABDE 4-day dark- 2 hours Rc50		 Log2 signal ratio
WT no Pi
1 245025_at ATCG00130 ATPF 0.350 -0.080
2 254607_at AT4G18920 unknown 0.261 0.012
3 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 0.220 0.327
4 249915_at AT5G22870 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.179 0.005
5 245904_at AT5G11110 ATSPS2F, sucrose phosphate synthase 2F, KNS2, KAONASHI 2, SPS1, SUCROSE PHOSPHATE SYNTHASE 1, SPS2F, sucrose phosphate synthase 2F, SPSA2, sucrose-phosphate synthase A2 0.158 0.415
6 249768_at AT5G24100 [Leucine-rich repeat protein kinase family protein] 0.145 0.312
7 251202_at AT3G63040 unknown 0.144 -0.045
8 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.121 0.045
9 250979_at AT5G03090 unknown 0.116 0.023
10 245486_x_at AT4G16240 unknown 0.115 0.056
11 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] 0.113 0.083
12 257333_at ATMG01360 COX1, cytochrome oxidase 0.108 0.080
13 256773_at AT3G13630 unknown 0.100 -0.020
14 266360_at AT2G32250 FRS2, FAR1-related sequence 2 0.100 0.091
15 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 -0.183 -0.266
16 263602_at AT2G16360 [Ribosomal protein S25 family protein] -0.157 -0.147
17 257254_at AT3G21950 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.150 -0.034
18 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.147 -0.031
19 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 -0.132 -0.266
20 248053_at AT5G55810 AtNMNAT, nicotinate/nicotinamide mononucleotide adenyltransferase, NMNAT, nicotinate/nicotinamide mononucleotide adenyltransferase -0.127 -0.121
21 259021_at AT3G07540 [Actin-binding FH2 (formin homology 2) family protein] -0.125 -0.270
22 257555_at AT3G24780 [Uncharacterised conserved protein UCP015417, vWA] -0.124 -0.045
23 254027_at AT4G25835 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.118 -0.303
24 254757_at AT4G13240 ATROPGEF9, ROPGEF9, ROP (rho of plants) guanine nucleotide exchange factor 9 -0.110 -0.015
25 245439_at AT4G16670 unknown -0.105 -0.068
26 264135_at AT1G79030 [Chaperone DnaJ-domain superfamily protein] -0.104 0.059
27 256971_at AT3G21100 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.103 -0.034