4.0:Information of module
coi1
In comparison with root Dosed gold help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019252 starch biosynthetic process BP 3.561e-04
GO:0000023 maltose metabolic process BP 1.683e-03
GO:0005982 starch metabolic process BP 1.698e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 7.772e-08
GO:0009611 response to wounding BP 1.381e-06
GO:0006950 response to stress BP 1.482e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
coi1		 Log2 signal ratio
root Dosed gold
1 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.754 -0.103
2 260462_at AT1G10970 ATZIP4, ZIP4, zinc transporter 4 precursor 0.490 0.037
3 252314_at AT3G49400 [Transducin/WD40 repeat-like superfamily protein] 0.385 -0.079
4 253943_at AT4G27030 FAD4, FATTY ACID DESATURASE 4, FADA, fatty acid desaturase A 0.327 -0.469
5 266690_at AT2G19900 ATNADP-ME1, Arabidopsis thaliana NADP-malic enzyme 1, NADP-ME1, NADP-malic enzyme 1 0.264 0.058
6 246212_at AT4G36930 SPT, SPATULA 0.251 0.074
7 262167_at AT1G74990 [RING/U-box superfamily protein] 0.233 0.005
8 261222_at AT1G20120 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.219 0.133
9 266275_at AT2G29370 [NAD(P)-binding Rossmann-fold superfamily protein] 0.219 -0.027
10 261927_at AT1G22500 AtATL15, Arabidopsis thaliana Arabidopsis toxicos en levadura 15, ATL15, Arabidopsis toxicos en levadura 15 0.218 -0.783
11 253387_at AT4G33010 AtGLDP1, glycine decarboxylase P-protein 1, GLDP1, glycine decarboxylase P-protein 1 0.212 -0.032
12 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.206 -0.204
13 267169_at AT2G37540 [NAD(P)-binding Rossmann-fold superfamily protein] 0.179 -0.624
14 247422_at AT5G62810 ATPEX14, PED2, PEROXISOME DEFECTIVE 2, PEX14, peroxin 14 0.166 -0.010
15 250432_at AT5G10420 [MATE efflux family protein] 0.163 0.017
16 247659_at AT5G60040 NRPC1, nuclear RNA polymerase C1 0.160 -0.016
17 252996_s_at AT4G38460 AtSSU, GGR, geranylgeranyl reductase, SSU, small subunit of Heterodimeric geranyl(geranyl)diphosphate synthase 0.157 -0.039
18 253518_at AT4G31400 AtCTF7, CTF7, CHROMOSOME TRANSMISSION FIDELITY 7, ECO1 0.156 -0.026
19 259970_at AT1G76570 AtLHCB7, LHCB7, light-harvesting complex B7 0.155 -0.119
20 264641_at AT1G09130 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.151 0.110
21 260660_at AT1G19485 [Transducin/WD40 repeat-like superfamily protein] 0.140 -0.064
22 252333_at AT3G48830 [polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein] 0.140 -0.046
23 256700_at AT3G52260 [Pseudouridine synthase family protein] 0.138 -0.035
24 262588_at AT1G15130 [Endosomal targeting BRO1-like domain-containing protein] 0.136 0.116
25 264886_at AT1G61120 GES, GERANYLLINALOOL SYNTHASE, TPS04, terpene synthase 04, TPS4, TERPENE SYNTHASE 4 -0.426 0.014
26 260429_at AT1G72450 JAZ6, jasmonate-zim-domain protein 6, TIFY11B, TIFY DOMAIN PROTEIN 11B -0.424 0.372
27 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A -0.371 0.424
28 252533_at AT3G46110 [LOCATED IN: plasma membrane] -0.357 0.572
29 260395_at AT1G69780 ATHB13 -0.354 -0.099
30 262913_at AT1G59960 [NAD(P)-linked oxidoreductase superfamily protein] -0.337 0.046
31 258507_at AT3G06500 A/N-InvC, alkaline/neutral invertase C -0.305 0.210
32 250738_at AT5G05730 AMT1, A-METHYL TRYPTOPHAN RESISTANT 1, ASA1, anthranilate synthase alpha subunit 1, JDL1, JASMONATE-INDUCED DEFECTIVE LATERAL ROOT 1, TRP5, TRYPTOPHAN BIOSYNTHESIS 5, WEI2, WEAK ETHYLENE INSENSITIVE 2 -0.284 0.535
33 257666_at AT3G20270 [lipid-binding serum glycoprotein family protein] -0.279 0.010
34 265452_at AT2G46510 AIB, ABA-inducible BHLH-type transcription factor, ATAIB, ABA-inducible BHLH-type transcription factor, JAM1, JA-associated MYC2-like 1 -0.258 0.145
35 250875_at AT5G04020 [calmodulin binding] -0.251 0.298
36 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase -0.237 -0.071
37 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 -0.235 0.218
38 250079_at AT5G16650 [Chaperone DnaJ-domain superfamily protein] -0.224 0.014
39 248971_at AT5G45000 [Disease resistance protein (TIR-NBS-LRR class) family] -0.216 0.135
40 249208_at AT5G42650 AOS, allene oxide synthase, CYP74A, CYTOCHROME P450 74A, DDE2, DELAYED DEHISCENCE 2 -0.203 0.115
41 261873_at AT1G11350 CBRLK1, CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE, RKS2, SD1-13, S-domain-1 13 -0.195 0.240
42 259385_at AT1G13470 unknown -0.178 -0.007
43 261039_at AT1G17455 ELF4-L4, ELF4-like 4 -0.175 -0.357
44 267077_at AT2G40970 MYBC1 -0.170 0.011
45 249025_at AT5G44720 [Molybdenum cofactor sulfurase family protein] -0.163 0.155
46 263593_at AT2G01860 EMB975, EMBRYO DEFECTIVE 975 -0.160 -0.144
47 245330_at AT4G14930 [Survival protein SurE-like phosphatase/nucleotidase] -0.154 0.080