4.0:Information of module
SAM L-AOPP+IAA
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010267 production of ta-siRNAs involved in RNA ... BP 2.013e-03
GO:0051701 interaction with host BP 2.126e-03
GO:0044403 symbiosis, encompassing mutualism throug... BP 2.176e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0030243 cellulose metabolic process BP 1.191e-03
GO:0010193 response to ozone BP 1.567e-03
GO:0051273 beta-glucan metabolic process BP 2.503e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
SAM L-AOPP+IAA		 Log2 signal ratio
bri1-116
1 255189_at AT4G07350 unknown 0.298 0.090
2 244933_at ATCG01070 NDHE 0.275 0.040
3 252876_at AT4G39970 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.265 0.095
4 246935_at AT5G25350 EBF2, EIN3-binding F box protein 2 0.224 0.050
5 259528_at AT1G12330 unknown 0.218 0.136
6 256922_at AT3G19010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.209 -0.056
7 254624_at AT4G18580 unknown 0.206 -0.220
8 263084_at AT2G27180 unknown 0.204 0.040
9 245430_at AT4G17060 FIP2, FRIGIDA interacting protein 2 0.202 0.111
10 249804_at AT5G23790 AtGolS5, galactinol synthase 5, GolS5, galactinol synthase 5 0.187 -0.096
11 257681_at AT3G13370 unknown 0.179 0.084
12 247575_at AT5G61030 GR-RBP3, glycine-rich RNA-binding protein 3 0.174 -0.015
13 264632_at AT1G65640 DEG4, degradation of periplasmic proteins 4, DegP4, DegP protease 4 0.171 0.059
14 251009_at AT5G02640 unknown 0.170 -0.090
15 253529_at AT4G31520 [SDA1 family protein] 0.168 -0.099
16 250884_at AT5G03940 54CP, 54 CHLOROPLAST PROTEIN, CPSRP54, chloroplast signal recognition particle 54 kDa subunit, FFC, FIFTY-FOUR CHLOROPLAST HOMOLOGUE, SRP54CP, SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT CHLOROPLAST PROTEIN 0.167 0.412
17 254400_at AT4G21270 ATK1, kinesin 1, KATA, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, KATAP, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN 0.160 0.065
18 262648_at AT1G14030 LSMT-L, lysine methyltransferase (LSMT)-like 0.157 0.159
19 265234_at AT2G07721 unknown 0.154 0.159
20 259418_at AT1G02390 ATGPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2, GPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2 0.153 -0.070
21 260840_at AT1G29050 TBL38, TRICHOME BIREFRINGENCE-LIKE 38 0.150 -0.285
22 259965_at AT1G53670 ATMSRB1, MSRB1, methionine sulfoxide reductase B 1 0.148 0.100
23 267007_at AT2G34480 [Ribosomal protein L18ae/LX family protein] 0.147 0.064
24 263514_at AT2G31860 [pseudogene] 0.143 0.059
25 260264_at AT1G68500 unknown 0.141 0.294
26 263609_at AT2G16250 [Leucine-rich repeat protein kinase family protein] 0.141 -0.085
27 265556_at AT2G07490 [gypsy-like retrotransposon family (Athila), has a 4.1e-27 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.140 0.026
28 259152_at AT3G10210 [SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein] 0.140 0.062
29 250177_at AT5G14420 RGLG2, RING domain ligase2 0.140 0.066
30 250439_at AT5G10450 14-3-3lambda, 14-3-3 PROTEIN G-BOX FACTOR14 LAMBDA, AFT1, GRF6, G-box regulating factor 6 0.140 0.014
31 254848_at AT4G11960 PGRL1B, PGR5-like B 0.139 0.017
32 255570_at AT4G01100 ADNT1, adenine nucleotide transporter 1 0.138 0.040
33 253477_at AT4G32320 APX6, ascorbate peroxidase 6 0.136 0.072
34 256194_at AT1G36810 [pseudogene] 0.131 0.116
35 245816_at AT1G26210 ATSOFL1, SOB FIVE-LIKE 1, SOFL1, SOB five-like 1 0.127 0.096
36 262373_at AT1G73120 unknown 0.125 -0.096
37 257547_at AT3G13000 unknown 0.123 -0.021
38 248479_at AT5G50910 unknown 0.122 0.064
39 245897_at AT5G09400 KUP7, K+ uptake permease 7 0.121 -0.026
40 264633_at AT1G65660 SMP1, SWELLMAP 1 0.121 0.039
41 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 0.121 -0.281
42 266986_at AT2G39630 [Nucleotide-diphospho-sugar transferases superfamily protein] 0.121 -0.069
43 248538_at AT5G50110 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.121 0.141
44 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 0.119 0.049
45 251904_at AT3G54130 [Josephin family protein] 0.117 -0.066
46 244943_at ATMG00070 NAD9, NADH dehydrogenase subunit 9 0.117 0.226
47 247438_at AT5G62460 [RING/FYVE/PHD zinc finger superfamily protein] 0.116 -0.016
48 252512_at AT3G46290 HERK1, hercules receptor kinase 1 0.116 -0.210
49 256459_at AT1G36180 ACC2, acetyl-CoA carboxylase 2 0.115 0.038
50 257522_at AT3G08990 [Yippee family putative zinc-binding protein] 0.114 0.012
51 266968_at AT2G39360 [Protein kinase superfamily protein] 0.113 -0.219
52 257931_at AT3G17030 [Nucleic acid-binding proteins superfamily] 0.112 0.078
53 256944_at AT3G18990 REM39, REPRODUCTIVE MERISTEM 39, VRN1, REDUCED VERNALIZATION RESPONSE 1 0.112 -0.102
54 259513_at AT1G12430 ARK3, armadillo repeat kinesin 3, AtKINUa, Arabidopsis thaliana KINESIN Ungrouped clade, gene A, PAK, phosphatidic acid kinase 0.111 0.101
55 264677_at AT1G09700 DRB1, DSRNA-BINDING PROTEIN 1, HYL1, HYPONASTIC LEAVES 1 0.111 0.076
56 248805_at AT5G47480 MAG5, MAIGO 5 0.111 -0.060
57 247275_at AT5G64370 BETA-UP, beta-ureidopropionase, PYD3, PYRIMIDINE 3 0.111 -0.086
58 248432_at AT5G51390 unknown 0.111 0.033
59 250905_at AT5G03640 [Protein kinase superfamily protein] 0.110 -0.080
60 263185_at AT1G05520 [Sec23/Sec24 protein transport family protein] 0.109 0.023
61 245158_at AT2G33130 RALF18, RALFL18, ralf-like 18 0.109 -0.023
62 256852_at AT3G18610 ATNUC-L2, nucleolin like 2, NUC-L2, nucleolin like 2, PARLL1, PARALLEL1-LIKE 1 0.106 -0.072
63 264315_at AT1G70370 PG2, polygalacturonase 2 0.105 -0.075
64 248705_at AT5G48520 AtAUG3, AUG3, augmin 3 0.105 -0.029
65 263666_at AT1G04510 MAC3A, MOS4-associated complex 3A 0.104 0.089
66 264306_at AT1G78890 unknown 0.104 0.064
67 255236_at AT4G05520 ATEHD2, EPS15 homology domain 2, EHD2, EPS15 homology domain 2 0.104 -0.062
68 256820_at AT3G22170 CPD45, CHLOROPLAST DIVISION MUTANT 45, FHY3, far-red elongated hypocotyls 3 -0.318 0.002
69 263363_at AT2G03850 [Late embryogenesis abundant protein (LEA) family protein] -0.316 0.059
70 254610_at AT4G18890 BEH3, BES1/BZR1 homolog 3 -0.308 -0.056
71 250903_at AT5G03600 [SGNH hydrolase-type esterase superfamily protein] -0.301 0.017
72 260348_at AT1G69350 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.289 0.016
73 252671_at AT3G44190 [FAD/NAD(P)-binding oxidoreductase family protein] -0.258 -0.056
74 252050_at AT3G52550 unknown -0.236 0.034
75 263962_at AT2G36350 [Protein kinase superfamily protein] -0.236 0.227
76 253203_at AT4G34710 ADC2, arginine decarboxylase 2, ATADC2, SPE2 -0.236 -0.214
77 250727_at AT5G06430 [Thioredoxin superfamily protein] -0.235 0.051
78 252786_at AT3G42670 CHR38, chromatin remodeling 38, CLSY, CLASSY1, CLSY1, CLASSY 1 -0.234 0.085
79 252264_at AT3G49590 ATG13, autophagy-related 13 -0.230 0.045
80 257995_at AT3G19940 [Major facilitator superfamily protein] -0.225 0.082
81 257361_at AT2G07740 [similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G01050.1)] -0.222 0.152
82 259728_at AT1G60970 [SNARE-like superfamily protein] -0.216 0.050
83 249651_at AT5G37020 ARF8, auxin response factor 8, ATARF8 -0.206 0.068
84 261162_at AT1G34440 unknown -0.202 0.091
85 265396_at AT2G21040 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.196 -0.062
86 251517_at AT3G59370 [Vacuolar calcium-binding protein-related] -0.189 -0.344
87 261999_at AT1G33800 AtGXMT1, GXM1, glucuronoxylan methyltransferase 1, GXMT1, glucuronoxylan methyltransferase 1 -0.189 -0.289
88 251162_at AT3G63300 FKD1, FORKED 1 -0.187 0.102
89 259827_at AT1G72270 unknown -0.184 0.043
90 262835_at AT1G14660 ATNHX8, Na+/H+ exchanger 8, NHX8, Na+/H+ exchanger 8, NHX8, SODIUM HYDROGEN EXCHANGER 8 -0.182 0.135
91 262298_at AT1G27530 unknown -0.180 0.046
92 253250_at AT4G34690 unknown -0.180 -0.024
93 252041_at AT3G52090 ATRPB13.6, NRPB11, NRPD11, NRPE11 -0.180 0.096
94 250607_at AT5G07370 ATIPK2A, INOSITOL POLYPHOSPHATE KINASE 2 ALPHA, IMPK, inositol multi-phosphate kinase, IPK2a, inositol polyphosphate kinase 2 alpha -0.179 0.015
95 262312_at AT1G70830 MLP28, MLP-like protein 28 -0.178 -0.048
96 247314_at AT5G64000 ATSAL2, SAL2 -0.177 0.016
97 256688_at AT3G32130 unknown -0.176 0.069
98 260790_at AT1G06240 unknown -0.176 0.162
99 264752_at AT1G23010 LPR1, Low Phosphate Root1 -0.173 0.257
100 247064_at AT5G66890 [Leucine-rich repeat (LRR) family protein] -0.173 0.046
101 248330_at AT5G52810 [NAD(P)-binding Rossmann-fold superfamily protein] -0.169 0.042
102 249160_at AT5G42660 unknown -0.165 -0.108
103 260452_at AT1G72350 [MADS-box transcription factor family protein] -0.162 0.064
104 260472_at AT1G10990 unknown -0.160 -0.063
105 260470_at AT1G11125 unknown -0.160 0.013
106 259276_at AT3G01190 [Peroxidase superfamily protein] -0.159 -0.173
107 257058_at AT3G15352 ATCOX17, ARABIDOPSIS THALIANA CYTOCHROME C OXIDASE 17, COX17, cytochrome c oxidase 17 -0.159 0.035
108 252759_at AT3G42630 [Pentatricopeptide repeat (PPR) superfamily protein] -0.158 0.085
109 249871_at AT5G23110 [Zinc finger, C3HC4 type (RING finger) family protein] -0.157 0.054
110 252966_at AT4G38870 [F-box and associated interaction domains-containing protein] -0.154 0.051
111 254749_at AT4G13130 [Cysteine/Histidine-rich C1 domain family protein] -0.154 -0.219
112 266467_at AT2G47760 ALG3, asparagine-linked glycosylation 3, AtALG3, Arabidopsis thaliana asparagine-linked glycosylation 3 -0.153 0.057
113 255159_at AT4G07810 [copia-like retrotransposon family, has a 7.1e-230 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.152 0.070
114 251322_at AT3G61440 ARATH;BSAS3;1, BETA-SUBSTITUTED ALA SYNTHASE 3;1, ATCYSC1, CYSTEINE SYNTHASE C1, CYSC1, cysteine synthase C1 -0.152 0.019
115 245504_at AT4G15660 [Thioredoxin superfamily protein] -0.150 0.880
116 261157_at AT1G34510 [Peroxidase superfamily protein] -0.149 -0.104
117 263429_at AT2G22250 AAT, aspartate aminotransferase, ATAAT, ASPARTATE AMINOTRANSFERASE, MEE17, MATERNAL EFFECT EMBRYO ARREST 17 -0.146 -0.067
118 266868_at AT2G44630 [Galactose oxidase/kelch repeat superfamily protein] -0.146 0.128
119 251022_at AT5G02150 Fes1C, Fes1C -0.145 0.200
120 260675_at AT1G19430 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.144 0.022
121 261818_at AT1G11390 [Protein kinase superfamily protein] -0.143 0.070
122 251521_at AT3G59420 ACR4, crinkly4, CR4, crinkly4 -0.141 0.030
123 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 -0.140 0.064
124 266460_at AT2G47930 AGP26, arabinogalactan protein 26, ATAGP26, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 26 -0.139 0.093
125 261639_at AT1G50010 TUA2, tubulin alpha-2 chain -0.139 -0.063
126 247175_at AT5G65280 GCL1, GCR2-like 1 -0.137 0.128
127 254892_at AT4G11800 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.134 -0.013
128 259548_at AT1G35260 MLP165, MLP-like protein 165 -0.133 -0.328
129 256219_at AT1G56260 MDO1, MERISTEM DISORGANIZATION 1, TEN1, telomeric pathways in association with Stn1 -0.133 0.146
130 253623_at AT4G30570 [Glucose-1-phosphate adenylyltransferase family protein] -0.133 0.077
131 248199_at AT5G54170 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.129 0.143
132 245743_at AT1G51080 unknown -0.126 0.011
133 260369_at AT1G69620 RPL34, ribosomal protein L34 -0.126 0.034
134 250081_at AT5G17180 unknown -0.125 0.013