4.0:Information of module
Methyl Violet 0.5 uM
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 4.001e-03
GO:0006760 folic acid-containing compound metabolic... BP 4.831e-03
GO:0042558 pteridine-containing compound metabolic ... BP 4.831e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019252 starch biosynthetic process BP 5.220e-03
GO:0006569 tryptophan catabolic process BP 9.158e-03
GO:0046218 indolalkylamine catabolic process BP 9.158e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Methyl Violet 0.5 uM		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.227 0.010
2 260267_at AT1G68530 CER6, ECERIFERUM 6, CUT1, CUTICULAR 1, G2, KCS6, 3-ketoacyl-CoA synthase 6, POP1, POLLEN-PISTIL INCOMPATIBILITY 1 0.207 0.154
3 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 0.198 0.056
4 263950_at AT2G36020 HVA22J, HVA22-like protein J 0.191 -0.340
5 259458_at AT1G44085 [glycine-rich protein] 0.189 0.170
6 258302_at AT3G30610 unknown 0.188 -0.065
7 255717_at AT4G00350 [MATE efflux family protein] 0.182 -0.014
8 256870_at AT3G26300 CYP71B34, cytochrome P450, family 71, subfamily B, polypeptide 34 0.180 -0.053
9 255057_at AT4G09840 unknown 0.174 -0.144
10 264714_at AT1G69990 [Leucine-rich repeat protein kinase family protein] 0.171 0.035
11 262256_at AT1G53810 [copia-like retrotransposon family, has a 8.0e-248 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)] 0.168 -0.027
12 249484_at AT5G38970 ATBR6OX, BR6OX, BRASSINOSTEROID-6-OXIDASE, BR6OX1, brassinosteroid-6-oxidase 1, CYP85A1 0.166 0.050
13 261162_at AT1G34440 unknown 0.164 0.238
14 252316_at AT3G48700 ATCXE13, carboxyesterase 13, CXE13, carboxyesterase 13 0.162 -0.007
15 249811_at AT5G23760 [Copper transport protein family] 0.161 -0.116
16 254264_at AT4G23510 [Disease resistance protein (TIR-NBS-LRR class) family] 0.160 0.045
17 261068_at AT1G07450 [NAD(P)-binding Rossmann-fold superfamily protein] 0.159 0.019
18 264782_at AT1G08810 AtMYB60, myb domain protein 60, MYB60, myb domain protein 60 0.157 0.105
19 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] 0.155 -0.210
20 248486_at AT5G51060 ATRBOHC, A. THALIANA RESPIRATORY BURST OXIDASE HOMOLOG C, RBOHC, RESPIRATORY BURST OXIDASE HOMOLOG C, RHD2, ROOT HAIR DEFECTIVE 2 0.155 0.136
21 252770_at AT3G42860 [zinc knuckle (CCHC-type) family protein] -0.186 0.002
22 252240_at AT3G50010 [Cysteine/Histidine-rich C1 domain family protein] -0.181 0.023
23 255175_at AT4G07960 ATCSLC12, Cellulose-synthase-like C12, CSLC12, CELLULOSE-SYNTHASE LIKE C12, CSLC12, Cellulose-synthase-like C12 -0.178 0.060
24 266719_at AT2G46830 AtCCA1, CCA1, circadian clock associated 1 -0.166 0.013
25 249977_at AT5G18820 Cpn60alpha2, chaperonin-60alpha2, EMB3007, embryo defective 3007 -0.156 0.135
26 259711_at AT1G77570 AtREN1, REN1, restricted to nucleolus 1 -0.147 -0.553
27 251126_at AT5G01070 [RING/FYVE/PHD zinc finger superfamily protein] -0.146 -0.101
28 247774_at AT5G58660 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.143 -0.258
29 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 -0.143 -0.319
30 255546_at AT4G01910 [Cysteine/Histidine-rich C1 domain family protein] -0.140 0.120
31 266508_at AT2G47920 NET3C, Networked 3C -0.138 -0.085
32 245635_at AT1G25250 AtIDD16, indeterminate(ID)-domain 16, IDD16, indeterminate(ID)-domain 16 -0.133 -0.058
33 265780_at AT2G07380 [Mutator-like transposase family, has a 5.0e-62 P-value blast match to O22273 /233-373 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -0.127 0.007
34 255888_at AT1G20300 [Pentatricopeptide repeat (PPR) superfamily protein] -0.126 0.141
35 246987_at AT5G67300 ATMYB44, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44, ATMYBR1, MYB44, MYBR1, myb domain protein r1 -0.123 -0.075
36 258213_at AT3G17950 unknown -0.116 0.106
37 258229_at AT3G27700 [zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein] -0.112 -0.094
38 260010_at AT1G68020 ATTPS6, TPS6, TREHALOSE -6-PHOSPHATASE SYNTHASE S6 -0.112 0.182
39 264456_at AT1G10390 [Nucleoporin autopeptidase] -0.106 -0.028