AGICode | AT5G61320 |
Description | cytochrome P450, family 89, subfamily A, polypeptide 3 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G61320 | cytochrome P450, family 89, subfamily A, polypeptide 3 | cytochrome P450, family 89, subfamily A, polypeptide 3 |
1 | 0.31 | -0.33 | ||
2 | AT4G02490 | transposable element gene | 0.67 | 0.33 | -0.32 | |||
3 | AT1G02550 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.65 | 0.31 | -0.3 | |||
4 | AT1G74740 | calcium-dependent protein kinase 30 | ATCPK30, CALCIUM-DEPENDENT PROTEIN KINASE 1A, calcium-dependent protein kinase 30 |
0.65 | 0.31 | -0.31 | ||
5 | AT2G33520 | unknown protein; Has 68 Blast hits to 68 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.32 | -0.31 | |||
6 | AT1G23600 | Domain of unknown function DUF220 | 0.61 | 0.33 | -0.34 | |||
7 | AT2G07190 | Domain of unknown function (DUF1985) | 0.61 | 0.31 | -0.3 | |||
8 | AT4G11730 | Cation transporter/ E1-E2 ATPase family protein | 0.61 | 0.32 | -0.33 | |||
9 | AT2G11210 | transposable element gene | 0.6 | 0.31 | -0.32 | |||
10 | AT5G02980 | Galactose oxidase/kelch repeat superfamily protein | 0.6 | 0.29 | -0.33 | |||
11 | AT3G01580 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.6 | 0.32 | -0.33 | |||
12 | AT1G51210 | UDP-Glycosyltransferase superfamily protein | 0.6 | 0.33 | -0.32 | |||
13 | AT5G34830 | unknown protein; Has 19 Blast hits to 19 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.32 | -0.3 | |||
14 | AT2G20150 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.35 | -0.32 | |||
15 | AT1G04700 | PB1 domain-containing protein tyrosine kinase | 0.59 | 0.32 | -0.33 | |||
16 | AT3G13840 | GRAS family transcription factor | -0.59 | 0.32 | -0.3 | |||
17 | AT1G48640 | Transmembrane amino acid transporter family protein | 0.59 | 0.36 | -0.28 | |||
18 | AT5G35510 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.59 | 0.33 | -0.32 | |||
19 | AT2G30380 | Plant protein of unknown function (DUF641) | -0.58 | 0.32 | -0.32 | |||
20 | AT3G42330 | transposable element gene | -0.57 | 0.31 | -0.27 | |||
21 | AT5G62310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
INCOMPLETE ROOT HAIR ELONGATION | 0.57 | 0.32 | -0.3 | ||
22 | AT4G16460 | unknown protein; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 4; Plants - 16; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.57 | 0.34 | -0.3 | |||
23 | AT1G50750 | Plant mobile domain protein family | 0.57 | 0.31 | -0.31 | |||
24 | AT4G04490 | cysteine-rich RLK (RECEPTOR-like protein kinase) 36 | cysteine-rich RLK (RECEPTOR-like protein kinase) 36 |
-0.56 | 0.31 | -0.3 | ||
25 | ATMG00010 | hypothetical protein | ORF153A | 0.56 | 0.33 | -0.32 | ||
26 | AT4G07840 | transposable element gene | -0.56 | 0.32 | -0.32 | |||
27 | AT5G64720 | Protein of unknown function (DUF1278) | -0.56 | 0.32 | -0.31 | |||
28 | AT1G57906 | unknown protein; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.29 | -0.3 | |||
29 | AT1G13630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.56 | 0.31 | -0.32 | |||
30 | AT5G01030 | Protein of unknown function (DUF3527) | -0.55 | 0.32 | -0.3 | |||
31 | AT1G71696 | carboxypeptidase D, putative | SUPPRESSOR OF LLP1 1 | -0.55 | 0.3 | -0.31 | ||
32 | AT3G23850 | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.29 | -0.31 | |||
33 | AT2G41930 | Protein kinase superfamily protein | 0.55 | 0.31 | -0.31 | |||
34 | AT2G01770 | vacuolar iron transporter 1 | ATVIT1, vacuolar iron transporter 1 |
-0.54 | 0.32 | -0.32 | ||
35 | AT5G25880 | NADP-malic enzyme 3 | Arabidopsis thaliana NADP-malic enzyme 3, NADP-malic enzyme 3 |
0.54 | 0.33 | -0.32 | ||
36 | AT2G07430 | transposable element gene | 0.54 | 0.3 | -0.33 | |||
37 | AT3G44570 | Arabidopsis retrotransposon ORF-1 protein | 0.54 | 0.3 | -0.31 | |||
38 | AT3G22870 | F-box and associated interaction domains-containing protein | 0.54 | 0.32 | -0.31 | |||
39 | AT4G11700 | Protein of unknown function (DUF626) | 0.53 | 0.31 | -0.33 | |||
40 | AT2G17750 | NEP-interacting protein 1 | NEP-interacting protein 1 | 0.53 | 0.3 | -0.32 | ||
41 | AT4G36790 | Major facilitator superfamily protein | 0.53 | 0.3 | -0.31 | |||
42 | AT1G48800 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.53 | 0.31 | -0.31 | |||
43 | AT1G67990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
TAPETUM-SPECIFIC METHYLTRANSFERASE 1, TSM1 |
0.52 | 0.32 | -0.29 | ||
44 | AT2G46960 | cytochrome P450, family 709, subfamily B, polypeptide 1 | cytochrome P450, family 709, subfamily B, polypeptide 1 |
0.52 | 0.3 | -0.3 | ||
45 | AT3G06090 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower, leaf, seed; EXPRESSED DURING: petal differentiation and expansion stage, LP.08 eight leaves visible, E expanded cotyledon stage; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.33 | -0.3 | |||
46 | AT2G26620 | Pectin lyase-like superfamily protein | 0.52 | 0.3 | -0.33 | |||
47 | AT1G33220 | Glycosyl hydrolase superfamily protein | 0.51 | 0.32 | -0.31 | |||
48 | AT2G22390 | pseudogene, putative GTP-binding protein, similar to GTP-binding protein GI:303738 from (Pisum sativum); blastp match of 75% identity and 3.6e-56 P-value to GP|303738|dbj|BAA02110.1||D12542 GTP-binding protein {Pisum sativum} |
ATRABA4E, RAB GTPase homolog A4E | -0.51 | 0.31 | -0.33 | ||
49 | AT2G22340 | unknown protein; Has 56 Blast hits to 38 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.31 | -0.3 | |||
50 | AT5G20170 | RNA polymerase II transcription mediators | -0.51 | 0.31 | -0.32 | |||
51 | AT5G05070 | DHHC-type zinc finger family protein | 0.51 | 0.32 | -0.32 | |||
52 | AT5G03980 | SGNH hydrolase-type esterase superfamily protein | 0.51 | 0.32 | -0.31 | |||
53 | AT5G11400 | Protein kinase superfamily protein | -0.5 | 0.3 | -0.34 | |||
54 | AT4G11480 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 | cysteine-rich RLK (RECEPTOR-like protein kinase) 32 |
-0.5 | 0.32 | -0.3 | ||
55 | AT5G25960 | Protein of Unknown Function (DUF239) | -0.49 | 0.34 | -0.31 | |||
56 | AT1G70000 | myb-like transcription factor family protein | -0.49 | 0.31 | -0.31 | |||
57 | AT2G35670 | VEFS-Box of polycomb protein | FERTILIZATION-INDEPENDENT ENDOSPERM 2, FERTILIZATION INDEPENDENT SEED 2 |
-0.48 | 0.31 | -0.32 | ||
58 | AT2G40260 | Homeodomain-like superfamily protein | -0.48 | 0.32 | -0.31 | |||
59 | AT3G43150 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G11010.1); Has 34 Blast hits to 32 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.48 | 0.34 | -0.31 | |||
60 | AT1G17545 | Protein phosphatase 2C family protein | -0.47 | 0.3 | -0.31 | |||
61 | AT2G06180 | transposable element gene | -0.47 | 0.3 | -0.35 | |||
62 | AT5G16850 | telomerase reverse transcriptase | telomerase reverse transcriptase, telomerase reverse transcriptase |
-0.46 | 0.31 | -0.32 | ||
63 | AT4G29770 | Target of trans acting-siR480/255. | -0.46 | 0.3 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
64 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
0.75 | 0.44 | -0.41 | ||
65 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.73 | 0.43 | -0.46 | ||
66 | C0108 | GMP | - | GMP | guanine and guanosine salvage II, guanosine nucleotides degradation I, guanosine nucleotides degradation II, guanine and guanosine salvage III, purine nucleotides de novo biosynthesis II, purine nucleotide metabolism (phosphotransfer and nucleotide modification) |
0.71 | 0.47 | -0.44 | ||
67 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.67 | 0.42 | -0.46 | ||
68 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.66 | 0.44 | -0.45 | ||
69 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | 0.66 | 0.45 | -0.44 | ||
70 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.61 | 0.42 | -0.42 | ||
71 | C0104 | Glutathione | - | Glutathione | glucosinolate biosynthesis from tryptophan, glutathione redox reactions I, glutathione degradation, gamma-glutamyl cycle (plant pathway), indole glucosinolate breakdown (active in intact plant cell), selenate reduction, glutathione redox reactions II, glucosinolate biosynthesis from trihomomethionine, ascorbate glutathione cycle, glucosinolate biosynthesis from pentahomomethionine, camalexin biosynthesis, glucosinolate biosynthesis from homomethionine, glucosinolate biosynthesis from phenylalanine, methylglyoxal degradation I, sulfate reduction II (assimilatory), glucosinolate biosynthesis from dihomomethionine, indole glucosinolate breakdown (insect chewing induced), glutathione biosynthesis, formaldehyde oxidation II (glutathione-dependent), glutathione-mediated detoxification II, glucosinolate biosynthesis from tetrahomomethionine, glucosinolate biosynthesis from hexahomomethionine, gamma-glutamyl cycle |
0.6 | 0.32 | -0.3 |