AT5G39910 : -
Query Information
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AGICode AT5G39910
Description Pectin lyase-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G39910 Pectin lyase-like superfamily protein 1 0.32 -0.31
2 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 -0.67 0.33 -0.32
3 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.3 -0.32
4 AT2G46180 golgin candidate 4 golgin candidate 4 0.65 0.32 -0.33
5 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 -0.64 0.31 -0.33
6 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein 0.64 0.34 -0.3
7 AT5G57290 60S acidic ribosomal protein family -0.64 0.32 -0.3
8 AT5G50370 Adenylate kinase family protein -0.64 0.32 -0.32
9 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 0.64 0.33 -0.33
10 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.63 0.3 -0.31
11 AT4G08670 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.31 -0.31
12 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 -0.63 0.32 -0.32
13 AT2G40240 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.32 -0.32
14 AT5G10880 tRNA synthetase-related / tRNA ligase-related 0.62 0.3 -0.31
15 AT3G09700 Chaperone DnaJ-domain superfamily protein -0.62 0.31 -0.31
16 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding 0.62 0.31 -0.32
17 AT2G21195 unknown protein; Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.3
18 AT1G55460 DNA/RNA-binding protein Kin17, conserved region 0.61 0.31 -0.31
19 AT2G45790 phosphomannomutase PHOSPHOMANNOMUTASE,
phosphomannomutase		 -0.61 0.32 -0.3
20 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 0.61 0.33 -0.32
21 AT1G29570 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.6 0.34 -0.33
22 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.6 0.33 -0.29
23 AT2G04520 Nucleic acid-binding, OB-fold-like protein -0.6 0.31 -0.3
24 AT1G54650 Methyltransferase family protein -0.6 0.32 -0.3
25 AT1G15250 Zinc-binding ribosomal protein family protein -0.59 0.34 -0.3
26 AT2G24340 sequence-specific DNA binding transcription factors -0.59 0.31 -0.29
27 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 -0.59 0.33 -0.31
28 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 -0.59 0.32 -0.33
29 AT1G73570 HCP-like superfamily protein 0.59 0.32 -0.3
30 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.59 0.32 -0.31
31 AT3G26730 RING/U-box superfamily protein 0.58 0.31 -0.32
32 AT3G45680 Major facilitator superfamily protein 0.58 0.31 -0.31
33 AT5G13590 unknown protein; Has 150 Blast hits to 121 proteins in 42
species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5;
Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source:
NCBI BLink).		 0.58 0.34 -0.32
34 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 0.58 0.33 -0.35
35 AT5G21130 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.58 0.3 -0.31
36 AT1G23820 spermidine synthase 1 spermidine synthase 1 -0.58 0.31 -0.33
37 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 -0.57 0.32 -0.3
38 AT4G29480 Mitochondrial ATP synthase subunit G protein -0.57 0.33 -0.31
39 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 0.57 0.3 -0.29
40 AT5G12370 exocyst complex component sec10 exocyst complex component sec10 0.57 0.31 -0.33
41 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.33 -0.31
42 AT3G63090 Ubiquitin carboxyl-terminal hydrolase family protein -0.57 0.34 -0.31
43 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 -0.57 0.32 -0.3
44 AT3G29380 Cyclin-like family protein plant-specific TFIIB-related
protein 2		 0.57 0.32 -0.31
45 AT1G24030 Protein kinase superfamily protein 0.57 0.32 -0.3
46 AT2G39500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.32 -0.31
47 AT1G44318 Aldolase superfamily protein hemb2 0.56 0.31 -0.3
48 AT3G43170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT5G54330.1); Has 90 Blast hits to
90 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.56 0.32 -0.29
49 AT1G26470 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus, H4/H2A
histone acetyltransferase complex; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast
hits to 60 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.56 0.32 -0.32
50 AT2G36040 transposable element gene 0.56 0.31 -0.34
51 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 -0.56 0.31 -0.31
52 AT5G09450 Tetratricopeptide repeat (TPR)-like superfamily protein -0.56 0.32 -0.32
53 AT2G18030 Peptide methionine sulfoxide reductase family protein -0.56 0.32 -0.32
54 AT4G14420 HR-like lesion-inducing protein-related -0.56 0.32 -0.32
55 AT3G42710 transposable element gene -0.56 0.34 -0.31
56 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 -0.55 0.31 -0.31
57 AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein 0.55 0.32 -0.3
58 AT4G05370 BCS1 AAA-type ATPase -0.55 0.32 -0.31
59 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.55 0.29 -0.32
60 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.55 0.32 -0.3
61 AT1G80040 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system
component Cue (InterPro:IPR003892); BEST Arabidopsis
thaliana protein match is: Ubiquitin system component Cue
protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.54 0.32 -0.32
62 AT4G07480 transposable element gene -0.54 0.29 -0.31
63 AT1G67500 recovery protein 3 recovery protein 3, recovery
protein 3		 0.54 0.29 -0.34
64 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 -0.54 0.32 -0.3
65 AT1G56350 Peptide chain release factor 2 -0.54 0.3 -0.31
66 AT5G54690 galacturonosyltransferase 12 galacturonosyltransferase 12,
IRREGULAR XYLEM 8, LGT6		 0.53 0.29 -0.32
67 AT1G03390 HXXXD-type acyl-transferase family protein 0.53 0.34 -0.33
68 AT3G51190 Ribosomal protein L2 family 0.53 0.34 -0.31
69 AT3G26860 Plant self-incompatibility protein S1 family 0.53 0.32 -0.3
70 AT2G28330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G08035.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.32 -0.31
71 AT5G38210 Protein kinase family protein 0.52 0.32 -0.35
72 AT1G19390 Wall-associated kinase family protein 0.52 0.33 -0.3
73 AT3G11740 Protein of unknown function (DUF567) 0.52 0.3 -0.31
74 AT5G57670 Protein kinase superfamily protein 0.52 0.32 -0.32
75 AT3G43900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43910.1); Has 15 Blast hits
to 15 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.3 -0.31
76 AT4G36510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.33 -0.32
77 AT4G09880 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.51 0.3 -0.31
78 AT5G18370 Disease resistance protein (TIR-NBS-LRR class) family 0.51 0.31 -0.33
79 AT3G25160 ER lumen protein retaining receptor family protein 0.5 0.32 -0.34
80 AT2G10850 transposable element gene 0.5 0.32 -0.31
81 AT1G28300 AP2/B3-like transcriptional factor family protein LEAFY COTYLEDON 2 0.5 0.34 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
82 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		0.7 0.33 -0.31 C0137
83 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		0.63 0.33 -0.32 C0260
84 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II 0.63 0.32 -0.31 C0097
85 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.61 0.31 -0.3 C0005
86 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		0.6 0.31 -0.33 C0022