AGICode | AT5G22875 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G22875 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
1 | 0.34 | -0.3 | |||
2 | AT1G64670 | alpha/beta-Hydrolases superfamily protein | BODYGUARD1, 9-CIS EPOXYCAROTENOID DIOXYGENASE DEFECTIVE 1 |
0.59 | 0.34 | -0.32 | ||
3 | AT4G32120 | Galactosyltransferase family protein | 0.59 | 0.33 | -0.33 | |||
4 | AT1G06070 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.57 | 0.3 | -0.34 | |||
5 | AT1G19860 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.57 | 0.34 | -0.33 | |||
6 | AT3G02440 | TRICHOME BIREFRINGENCE-LIKE 20 | TRICHOME BIREFRINGENCE-LIKE 20 | 0.56 | 0.33 | -0.31 | ||
7 | AT2G30380 | Plant protein of unknown function (DUF641) | 0.56 | 0.3 | -0.31 | |||
8 | AT4G35090 | catalase 2 | catalase 2 | 0.55 | 0.34 | -0.31 | ||
9 | AT3G26990 | ENTH/VHS family protein | 0.55 | 0.3 | -0.3 | |||
10 | AT1G78310 | VQ motif-containing protein | -0.55 | 0.31 | -0.32 | |||
11 | AT2G04840 | Protein of unknown function (DUF295) | 0.55 | 0.32 | -0.31 | |||
12 | AT1G19200 | Protein of unknown function (DUF581) | -0.54 | 0.3 | -0.32 | |||
13 | AT5G04960 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.54 | 0.31 | -0.32 | |||
14 | AT4G11840 | phospholipase D gamma 3 | phospholipase D gamma 3 | 0.54 | 0.32 | -0.32 | ||
15 | AT5G37630 | ARM repeat superfamily protein | EMBRYO DEFECTIVE 2656 | 0.54 | 0.33 | -0.32 | ||
16 | AT1G08270 | CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to 1133 proteins in 252 species: Archae - 47; Bacteria - 0; Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). |
-0.53 | 0.32 | -0.32 | |||
17 | AT2G33760 | Pentatricopeptide repeat (PPR) superfamily protein | 0.52 | 0.32 | -0.32 | |||
18 | AT3G43770 | transposable element gene | 0.51 | 0.32 | -0.31 | |||
19 | AT1G48930 | glycosyl hydrolase 9C1 | glycosyl hydrolase 9C1, glycosyl hydrolase 9C1 |
-0.51 | 0.31 | -0.32 | ||
20 | AT1G73700 | MATE efflux family protein | 0.51 | 0.31 | -0.32 | |||
21 | AT2G46360 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.32 | -0.31 | |||
22 | AT5G10740 | Protein phosphatase 2C family protein | -0.51 | 0.33 | -0.3 | |||
23 | AT2G39550 | Prenyltransferase family protein | GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT, GGB, PGGT-I |
-0.51 | 0.32 | -0.31 | ||
24 | AT5G07740 | actin binding | 0.51 | 0.34 | -0.33 | |||
25 | AT5G05500 | Pollen Ole e 1 allergen and extensin family protein | MOP10 | -0.5 | 0.33 | -0.31 | ||
26 | AT5G01030 | Protein of unknown function (DUF3527) | 0.5 | 0.3 | -0.31 | |||
27 | AT5G45230 | Disease resistance protein (TIR-NBS-LRR class) family | 0.5 | 0.32 | -0.33 | |||
28 | AT3G54590 | hydroxyproline-rich glycoprotein | hydroxyproline-rich glycoprotein, hydroxyproline-rich glycoprotein |
-0.5 | 0.32 | -0.3 | ||
29 | AT5G10140 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLOWERING LOCUS F |
0.5 | 0.32 | -0.32 | ||
30 | AT3G58390 | Eukaryotic release factor 1 (eRF1) family protein | -0.5 | 0.33 | -0.33 | |||
31 | AT3G14650 | cytochrome P450, family 72, subfamily A, polypeptide 11 | cytochrome P450, family 72, subfamily A, polypeptide 11 |
0.5 | 0.3 | -0.35 | ||
32 | AT2G28270 | Cysteine/Histidine-rich C1 domain family protein | -0.49 | 0.31 | -0.34 | |||
33 | AT2G16280 | 3-ketoacyl-CoA synthase 9 | 3-ketoacyl-CoA synthase 9 | 0.49 | 0.3 | -0.3 | ||
34 | AT4G02490 | transposable element gene | -0.49 | 0.3 | -0.3 | |||
35 | AT4G15980 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.49 | 0.33 | -0.33 | |||
36 | AT3G28830 | Protein of unknown function (DUF1216) | 0.48 | 0.3 | -0.3 | |||
37 | AT3G53910 | malate dehydrogenase-related | 0.48 | 0.31 | -0.31 | |||
38 | AT2G45130 | SPX domain gene 3 | ARABIDOPSIS THALIANA SPX DOMAIN GENE 3, SPX domain gene 3 |
-0.47 | 0.3 | -0.31 | ||
39 | AT4G10930 | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.47 | 0.33 | -0.3 | |||
40 | AT2G18270 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.46 | 0.33 | -0.29 | |||
41 | AT2G28610 | Homeodomain-like superfamily protein | PRESSED FLOWER, PRESSED FLOWER 1, WUSCHEL RELATED HOMEOBOX 3 |
-0.46 | 0.31 | -0.32 | ||
42 | AT5G24900 | cytochrome P450, family 714, subfamily A, polypeptide 2 | cytochrome P450, family 714, subfamily A, polypeptide 2, EUI-like p450 A2 |
-0.46 | 0.31 | -0.33 | ||
43 | AT5G14380 | arabinogalactan protein 6 | arabinogalactan protein 6 | -0.46 | 0.33 | -0.31 | ||
44 | AT5G57670 | Protein kinase superfamily protein | 0.45 | 0.32 | -0.29 | |||
45 | AT5G52480 | RNI-like superfamily protein | 0.45 | 0.33 | -0.33 | |||
46 | AT1G11630 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.45 | 0.29 | -0.28 | |||
47 | AT1G19780 | cyclic nucleotide gated channel 8 | cyclic nucleotide gated channel 8, CNGC8, cyclic nucleotide gated channel 8 |
0.45 | 0.33 | -0.3 | ||
48 | AT3G01730 | unknown protein; Has 8 Blast hits to 8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.44 | 0.31 | -0.31 | |||
49 | ATMG00890 | hypothetical protein | ORF106D | -0.44 | 0.31 | -0.32 | ||
50 | AT2G27520 | F-box and associated interaction domains-containing protein | -0.44 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
51 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.83 | 0.44 | -0.44 | ||
52 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
-0.76 | 0.45 | -0.43 | ||
53 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
-0.75 | 0.46 | -0.43 | ||
54 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.73 | 0.45 | -0.46 | ||
55 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | -0.71 | 0.46 | -0.45 | ||
56 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.69 | 0.43 | -0.45 | ||
57 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.69 | 0.47 | -0.45 | ||
58 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.68 | 0.46 | -0.42 | ||
59 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.68 | 0.44 | -0.41 | ||
60 | C0023 | 1,6-Anhydro-β-glucose | 1,6-Anhydro-β-D-glucose | Levoglucosan | - | -0.66 | 0.45 | -0.45 | ||
61 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.66 | 0.43 | -0.48 | ||
62 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.65 | 0.42 | -0.44 | ||
63 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | -0.65 | 0.41 | -0.44 | ||
64 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
-0.59 | 0.43 | -0.43 | ||
65 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
-0.57 | 0.45 | -0.45 | ||
66 | C0112 | Histidine | L-Histidine | L-Histidine | tRNA charging, histidine biosynthesis |
-0.54 | 0.32 | -0.31 | ||
67 | C0114 | Homocystine | L-Homocystine | - | - | -0.53 | 0.3 | -0.32 | ||
68 | C0062 | Betain | - | - | - | -0.51 | 0.31 | -0.31 | ||
69 | C0069 | Citrulline | - | Citrulline | citrulline-nitric oxide cycle, citrulline biosynthesis, nitric oxide biosynthesis I (in plants), urea cycle, citrulline degradation, arginine biosynthesis II (acetyl cycle), arginine biosynthesis I |
-0.44 | 0.31 | -0.31 |