AGICode | AT5G11760 |
Description | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G11760 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1764, eukaryotic (InterPro:IPR013885); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
1 | 0.32 | -0.32 | |||
2 | AT2G19480 | nucleosome assembly protein 1;2 | nucleosome assembly protein 1;2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 02, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 2 |
0.86 | 0.29 | -0.33 | ||
3 | AT2G45710 | Zinc-binding ribosomal protein family protein | 0.86 | 0.33 | -0.3 | |||
4 | AT4G12600 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.86 | 0.32 | -0.32 | |||
5 | AT3G22300 | ribosomal protein S10 | ribosomal protein S10 | 0.82 | 0.3 | -0.33 | ||
6 | AT2G44860 | Ribosomal protein L24e family protein | 0.81 | 0.31 | -0.31 | |||
7 | AT5G41970 | Metal-dependent protein hydrolase | 0.81 | 0.32 | -0.32 | |||
8 | AT5G41520 | RNA binding Plectin/S10 domain-containing protein | 0.81 | 0.31 | -0.32 | |||
9 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | 0.81 | 0.33 | -0.31 | |||
10 | AT4G08460 | Protein of unknown function (DUF1644) | 0.81 | 0.33 | -0.33 | |||
11 | AT2G42710 | Ribosomal protein L1p/L10e family | 0.8 | 0.31 | -0.33 | |||
12 | AT3G02190 | Ribosomal protein L39 family protein | 0.8 | 0.32 | -0.32 | |||
13 | AT1G79650 | Rad23 UV excision repair protein family | Arabidopsis thaliana aldehyde oxidase 1, RADIATION SENSITIVE23B |
0.8 | 0.32 | -0.32 | ||
14 | AT1G54770 | Fcf2 pre-rRNA processing protein | 0.79 | 0.32 | -0.33 | |||
15 | AT1G71840 | transducin family protein / WD-40 repeat family protein | 0.78 | 0.3 | -0.32 | |||
16 | AT3G27280 | prohibitin 4 | prohibitin 4, prohibitin 4 | 0.78 | 0.33 | -0.3 | ||
17 | AT5G57020 | myristoyl-CoA:protein N-myristoyltransferase | ARABIDOPSIS THALIANA MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, myristoyl-CoA:protein N-myristoyltransferase |
0.78 | 0.32 | -0.32 | ||
18 | AT2G39795 | Mitochondrial glycoprotein family protein | 0.77 | 0.33 | -0.35 | |||
19 | AT5G41010 | DNA directed RNA polymerase, 7 kDa subunit | NRPB12, NRPD12, NRPE12 | 0.77 | 0.33 | -0.31 | ||
20 | AT3G28200 | Peroxidase superfamily protein | 0.77 | 0.32 | -0.33 | |||
21 | AT3G19130 | RNA-binding protein 47B | RNA-binding protein 47B, RNA-binding protein 47B |
0.77 | 0.3 | -0.31 | ||
22 | AT1G66070 | Translation initiation factor eIF3 subunit | 0.76 | 0.35 | -0.3 | |||
23 | AT3G18165 | modifier of snc1,4 | Modifier of snc1,4 | 0.76 | 0.33 | -0.3 | ||
24 | AT3G10090 | Nucleic acid-binding, OB-fold-like protein | 0.76 | 0.31 | -0.33 | |||
25 | AT3G13160 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.75 | 0.32 | -0.35 | |||
26 | AT1G34020 | Nucleotide-sugar transporter family protein | 0.75 | 0.33 | -0.32 | |||
27 | AT3G61100 | Putative endonuclease or glycosyl hydrolase | 0.75 | 0.32 | -0.33 | |||
28 | AT1G60770 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.75 | 0.32 | -0.31 | |||
29 | AT3G17465 | ribosomal protein L3 plastid | ribosomal protein L3 plastid | 0.75 | 0.29 | -0.32 | ||
30 | AT2G36690 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
0.75 | 0.3 | -0.3 | |||
31 | AT5G14250 | Proteasome component (PCI) domain protein | CONSTITUTIVE PHOTOMORPHOGENIC 13, COP9 SIGNALOSOME SUBUNIT 3, FUSCA 11 |
0.75 | 0.32 | -0.33 | ||
32 | AT1G70310 | spermidine synthase 2 | spermidine synthase 2 | 0.75 | 0.32 | -0.31 | ||
33 | AT3G51830 | SAC domain-containing protein 8 | ATG5, SAC domain-containing protein 8 |
-0.74 | 0.29 | -0.31 | ||
34 | AT4G12480 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 |
0.74 | 0.32 | -0.32 | ||
35 | AT5G01670 | NAD(P)-linked oxidoreductase superfamily protein | -0.74 | 0.33 | -0.34 | |||
36 | AT4G37090 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.74 | 0.29 | -0.32 | |||
37 | AT3G06930 | protein arginine methyltransferase 4B | ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4B, protein arginine methyltransferase 4B |
0.73 | 0.32 | -0.31 | ||
38 | AT4G38350 | Patched family protein | -0.73 | 0.3 | -0.29 | |||
39 | AT5G14105 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.73 | 0.31 | -0.29 | |||
40 | AT4G01220 | Nucleotide-diphospho-sugar transferase family protein | male gametophyte defective 4 | 0.73 | 0.3 | -0.3 | ||
41 | AT2G27775 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27800.1); Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.73 | 0.29 | -0.3 | |||
42 | AT4G34750 | SAUR-like auxin-responsive protein family | 0.73 | 0.31 | -0.3 | |||
43 | AT4G02230 | Ribosomal protein L19e family protein | 0.73 | 0.34 | -0.32 | |||
44 | AT1G04830 | Ypt/Rab-GAP domain of gyp1p superfamily protein | -0.71 | 0.31 | -0.31 | |||
45 | AT2G38790 | unknown protein; Has 21 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.7 | 0.32 | -0.33 | |||
46 | AT5G01770 | HEAT repeat ;WD domain, G-beta repeat protein protein | ATRAPTOR1A, RAPTOR1A, RAPTOR2 | -0.68 | 0.31 | -0.31 | ||
47 | AT3G54290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.67 | 0.35 | -0.29 | |||
48 | AT3G10420 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
SEEDLING PLASTID DEVELOPMENT 1 | -0.66 | 0.35 | -0.33 | ||
49 | AT1G41810 | transposable element gene | -0.66 | 0.33 | -0.34 | |||
50 | AT3G48710 | DEK domain-containing chromatin associated protein | -0.65 | 0.32 | -0.32 | |||
51 | AT5G58160 | actin binding | -0.65 | 0.33 | -0.32 | |||
52 | AT1G80800 | pseudogene, 40S ribosomal protein S12 (RPS12B), similar to ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum vulgare); blastp match of 65% identity and 4.7e-12 P-value to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S ribosomal protein S12 {Oryza sativa (japonica cultivar-group)} |
-0.65 | 0.32 | -0.3 | |||
53 | AT1G01520 | Homeodomain-like superfamily protein | ALTERED SEED GERMINATION 4 | -0.63 | 0.32 | -0.3 | ||
54 | AT5G16150 | plastidic GLC translocator | GLUCOSE TRANSPORTER 1, plastidic GLC translocator |
-0.63 | 0.31 | -0.29 | ||
55 | AT1G07120 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). |
-0.62 | 0.29 | -0.32 | |||
56 | AT2G34840 | Coatomer epsilon subunit | -0.61 | 0.32 | -0.3 | |||
57 | AT3G22250 | UDP-Glycosyltransferase superfamily protein | -0.61 | 0.3 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
58 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.77 | 0.43 | -0.46 | ||
59 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.74 | 0.48 | -0.46 | ||
60 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | -0.69 | 0.42 | -0.43 | ||
61 | C0005 | β-Fructose-6-phosphate | β-D-Fructose-6-phosphate | D-Fructose-6-phosphate | starch biosynthesis, Rubisco shunt, Calvin-Benson-Bassham cycle, mannitol degradation II, ascorbate biosynthesis I (L-galactose pathway), UDP-N-acetyl-D-glucosamine biosynthesis II, GDP-mannose biosynthesis, mannose degradation, sucrose biosynthesis I, sucrose degradation III, glycolysis IV (plant cytosol), pentose phosphate pathway (non-oxidative branch), glycolysis I, superpathway of sucrose and starch metabolism II (photosynthetic tissue), D-mannose degradation, gluconeogenesis I |
-0.67 | 0.3 | -0.33 | ||
62 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
-0.66 | 0.42 | -0.42 | ||
63 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.66 | 0.43 | -0.45 | ||
64 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
-0.62 | 0.31 | -0.34 |