AT3G52690 : -
Query Information
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AGICode AT3G52690
Description RNI-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52690 RNI-like superfamily protein 1 0.28 -0.3
2 AT3G47160 RING/U-box superfamily protein -0.72 0.32 -0.29
3 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 0.69 0.31 -0.31
4 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.69 0.33 -0.32
5 AT1G02550 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.68 0.32 -0.32
6 AT4G37220 Cold acclimation protein WCOR413 family -0.68 0.31 -0.33
7 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 0.67 0.3 -0.31
8 AT5G44080 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.66 0.34 -0.32
9 AT2G14020 transposable element gene 0.66 0.31 -0.31
10 AT5G39960 GTP binding;GTP binding 0.66 0.33 -0.31
11 AT5G65500 U-box domain-containing protein kinase family protein -0.65 0.32 -0.35
12 AT1G32000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G38190.1); Has 14 Blast hits to 14
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.33 -0.31
13 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.64 0.31 -0.33
14 AT4G05610 transposable element gene 0.64 0.3 -0.35
15 AT1G32050 SCAMP family protein 0.63 0.32 -0.32
16 AT3G59630 diphthamide synthesis DPH2 family protein 0.63 0.32 -0.32
17 AT4G05240 Ubiquitin-like superfamily protein 0.63 0.32 -0.32
18 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 -0.63 0.33 -0.3
19 AT3G13400 SKU5 similar 13 SKU5 similar 13 0.63 0.29 -0.3
20 AT1G17040 SH2 domain protein A ARABIDOPSIS THALIANA SH2 DOMAIN
PROTEIN A, SH2 domain protein A,
STAT-TYPE LINKER-SH2 DOMAIN FACTOR
A		 -0.63 0.33 -0.3
21 AT2G28980 transposable element gene 0.62 0.31 -0.32
22 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.62 0.33 -0.31
23 AT3G29075 glycine-rich protein -0.62 0.31 -0.31
24 AT3G17630 cation/H+ exchanger 19 cation/H+ exchanger 19, cation/H+
exchanger 19		 0.62 0.32 -0.31
25 AT2G24450 FASCICLIN-like arabinogalactan protein 3 precursor FASCICLIN-like arabinogalactan
protein 3 precursor		 0.61 0.32 -0.3
26 AT4G37950 Rhamnogalacturonate lyase family protein 0.61 0.33 -0.31
27 AT2G21240 basic pentacysteine 4 BASIC PENTACYSTEINE 4, BBR, basic
pentacysteine 4		 -0.61 0.32 -0.31
28 AT1G49190 response regulator 19 response regulator 19, response
regulator 19		 0.61 0.31 -0.3
29 AT5G04180 alpha carbonic anhydrase 3 alpha carbonic anhydrase 3, ALPHA
CARBONIC ANHYDRASE 3		 -0.61 0.32 -0.33
30 AT1G30740 FAD-binding Berberine family protein 0.6 0.34 -0.3
31 AT2G36840 ACT-like superfamily protein ACT domain repeats 10 -0.6 0.32 -0.31
32 AT2G42990 GDSL-like Lipase/Acylhydrolase superfamily protein 0.6 0.31 -0.32
33 AT2G01770 vacuolar iron transporter 1 ATVIT1, vacuolar iron transporter
1		 0.59 0.29 -0.31
34 AT2G46260 BTB/POZ/Kelch-associated protein -0.59 0.32 -0.31
35 AT5G08600 U3 ribonucleoprotein (Utp) family protein 0.59 0.3 -0.31
36 AT5G35150 transposable element gene 0.59 0.29 -0.33
37 AT3G48710 DEK domain-containing chromatin associated protein -0.58 0.31 -0.32
38 AT3G10410 SERINE CARBOXYPEPTIDASE-LIKE 49 CARBOXYPEPTIDASE Y, SERINE
CARBOXYPEPTIDASE-LIKE 49		 -0.58 0.31 -0.32
39 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.34
40 AT3G07840 Pectin lyase-like superfamily protein 0.58 0.3 -0.33
41 AT5G52770 Copper transport protein family 0.58 0.32 -0.3
42 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.58 0.31 -0.31
43 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.58 0.32 -0.31
44 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family -0.57 0.3 -0.33
45 AT2G20350 Integrase-type DNA-binding superfamily protein -0.57 0.31 -0.31
46 AT2G13730 transposable element gene 0.57 0.31 -0.33
47 AT1G13610 alpha/beta-Hydrolases superfamily protein -0.57 0.29 -0.32
48 AT1G12775 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.32 -0.3
49 AT2G25070 Protein phosphatase 2C family protein -0.56 0.31 -0.29
50 AT4G07540 transposable element gene -0.56 0.32 -0.33
51 AT3G15870 Fatty acid desaturase family protein 0.56 0.31 -0.3
52 AT5G54700 Ankyrin repeat family protein -0.55 0.31 -0.31
53 AT4G35710 Arabidopsis protein of unknown function (DUF241) -0.55 0.35 -0.33
54 AT3G45490 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT2G25370.1); Has 99 Blast hits
to 96 proteins in 10 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.34 -0.32
55 AT2G26110 Protein of unknown function (DUF761) -0.55 0.3 -0.32
56 AT3G20550 SMAD/FHA domain-containing protein DAWDLE -0.54 0.32 -0.33
57 AT1G67370 DNA-binding HORMA family protein ASYNAPTIC 1, ATASY1 -0.54 0.32 -0.32
58 AT4G35770 Rhodanese/Cell cycle control phosphatase superfamily
protein		 ARABIDOPSIS THALIANA SENESCENCE 1,
DARK INDUCIBLE 1, SENESCENCE 1,
SENESCENCE ASSOCIATED GENE 1		 -0.54 0.31 -0.32
59 AT2G20500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 13 Blast hits to 13 proteins
in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.54 0.31 -0.34
60 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.54 0.33 -0.31
61 AT3G22870 F-box and associated interaction domains-containing protein -0.54 0.3 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		-0.79 0.43 -0.45 C0057
63 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.72 0.48 -0.46 C0056
64 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.69 0.46 -0.42 C0099
65 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.67 0.45 -0.45 C0032
66 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.64 0.46 -0.48 C0053
67 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.62 0.45 -0.47 C0075
68 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.61 0.47 -0.44 C0091