AT3G52040 : -
Query Information
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AGICode AT3G52040
Description unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.31 -0.31
2 AT2G44860 Ribosomal protein L24e family protein 0.9 0.32 -0.32
3 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.9 0.32 -0.31
4 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.89 0.29 -0.3
5 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.87 0.3 -0.32
6 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.87 0.3 -0.34
7 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.86 0.32 -0.32
8 AT2G45710 Zinc-binding ribosomal protein family protein 0.86 0.33 -0.32
9 AT2G32220 Ribosomal L27e protein family 0.86 0.33 -0.32
10 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 0.86 0.33 -0.31
11 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.86 0.31 -0.32
12 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.86 0.32 -0.3
13 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.85 0.31 -0.32
14 AT2G34260 transducin family protein / WD-40 repeat family protein human WDR55 (WD40 repeat) homolog 0.85 0.33 -0.31
15 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.85 0.31 -0.31
16 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.85 0.3 -0.3
17 AT1G52930 Ribosomal RNA processing Brix domain protein 0.84 0.33 -0.32
18 AT3G25940 TFIIB zinc-binding protein 0.84 0.29 -0.31
19 AT4G28450 nucleotide binding;protein binding 0.84 0.3 -0.32
20 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.84 0.32 -0.31
21 AT2G39390 Ribosomal L29 family protein 0.84 0.32 -0.33
22 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.84 0.31 -0.33
23 AT1G55900 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 embryo defective 1860, TIM50 0.84 0.32 -0.33
24 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.84 0.31 -0.3
25 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.83 0.33 -0.31
26 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 0.83 0.29 -0.3
27 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 0.83 0.32 -0.33
28 AT1G14980 chaperonin 10 chaperonin 10 0.83 0.31 -0.3
29 AT5G55920 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 OLIGOCELLULA 2 0.83 0.3 -0.28
30 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.83 0.34 -0.31
31 AT1G54770 Fcf2 pre-rRNA processing protein 0.82 0.34 -0.31
32 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.82 0.33 -0.33
33 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.82 0.31 -0.3
34 AT4G05440 temperature sensing protein-related embryo sac development arrest 35 0.82 0.32 -0.33
35 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.82 0.32 -0.33
36 AT3G55605 Mitochondrial glycoprotein family protein 0.82 0.31 -0.34
37 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.82 0.32 -0.31
38 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.82 0.33 -0.31
39 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.82 0.32 -0.31
40 AT3G62940 Cysteine proteinases superfamily protein 0.82 0.3 -0.31
41 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 0.82 0.3 -0.31
42 AT1G75670 DNA-directed RNA polymerases 0.81 0.33 -0.31
43 AT1G66070 Translation initiation factor eIF3 subunit 0.81 0.33 -0.3
44 AT2G40420 Transmembrane amino acid transporter family protein -0.81 0.31 -0.32
45 AT1G15740 Leucine-rich repeat family protein -0.81 0.32 -0.32
46 AT2G42710 Ribosomal protein L1p/L10e family 0.81 0.32 -0.32
47 AT3G57000 nucleolar essential protein-related 0.81 0.34 -0.3
48 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.81 0.29 -0.31
49 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.81 0.32 -0.33
50 AT1G79150 binding 0.81 0.3 -0.33
51 AT5G02050 Mitochondrial glycoprotein family protein 0.81 0.32 -0.33
52 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.81 0.31 -0.31
53 AT2G44510 CDK inhibitor P21 binding protein 0.81 0.31 -0.32
54 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 0.81 0.29 -0.31
55 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.81 0.32 -0.3
56 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.8 0.31 -0.31
57 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.8 0.29 -0.3
58 AT5G38890 Nucleic acid-binding, OB-fold-like protein 0.8 0.32 -0.31
59 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.8 0.33 -0.34
60 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 0.8 0.33 -0.32
61 AT3G02190 Ribosomal protein L39 family protein 0.8 0.32 -0.29
62 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.32 -0.31
63 AT5G62440 Protein of unknown function (DUF3223) 0.8 0.31 -0.31
64 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 0.8 0.29 -0.35
65 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.8 0.32 -0.3
66 AT3G01820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.33 -0.32
67 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.79 0.33 -0.3
68 AT3G19440 Pseudouridine synthase family protein 0.79 0.31 -0.3
69 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.31 -0.3
70 AT5G14510 ARM repeat superfamily protein -0.79 0.32 -0.32
71 AT1G79650 Rad23 UV excision repair protein family Arabidopsis thaliana aldehyde
oxidase 1, RADIATION SENSITIVE23B		 0.79 0.32 -0.32
72 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.79 0.33 -0.31
73 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.79 0.33 -0.32
74 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 -0.79 0.3 -0.3
75 AT3G13940 DNA binding;DNA-directed RNA polymerases 0.78 0.3 -0.29
76 AT5G66540 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: cytosol, nucleolus, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12
growth stages; CONTAINS InterPro DOMAIN/s: U3 small
nucleolar ribonucleoprotein complex, subunit Mpp10p
(InterPro:IPR012173), Mpp10 protein (InterPro:IPR007151);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.78 0.33 -0.31
77 AT5G39580 Peroxidase superfamily protein 0.78 0.32 -0.3
78 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.78 0.3 -0.31
79 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.78 0.3 -0.32
80 AT2G39795 Mitochondrial glycoprotein family protein 0.78 0.31 -0.33
81 AT4G32520 serine hydroxymethyltransferase 3 SERINE HYDROXYMETHYLTRANSFERASE 3,
serine hydroxymethyltransferase 3		 0.78 0.33 -0.32
82 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.78 0.33 -0.31
83 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.78 0.3 -0.31
84 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.78 0.32 -0.3
85 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 0.78 0.33 -0.3
86 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 0.78 0.3 -0.32
87 AT2G46170 Reticulon family protein 0.78 0.3 -0.33
88 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.78 0.33 -0.33
89 AT1G54380 spliceosome protein-related 0.78 0.32 -0.32
90 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.33 -0.31
91 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.78 0.3 -0.3
92 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.77 0.3 -0.3
93 AT3G07350 Protein of unknown function (DUF506) -0.77 0.32 -0.3
94 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.34 -0.32
95 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.76 0.32 -0.32
96 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.76 0.31 -0.32
97 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.75 0.31 -0.3
98 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.3
99 AT4G38350 Patched family protein -0.73 0.3 -0.32
100 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.3 -0.32
101 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.73 0.32 -0.35
102 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.72 0.3 -0.31
103 AT1G28260 Telomerase activating protein Est1 -0.72 0.33 -0.31
104 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.71 0.29 -0.32
105 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.7 0.3 -0.3
106 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 -0.7 0.33 -0.31
107 AT3G05640 Protein phosphatase 2C family protein -0.68 0.3 -0.31
108 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.67 0.32 -0.3
109 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.66 0.32 -0.34
110 AT3G44950 glycine-rich protein -0.66 0.31 -0.31
111 AT1G16730 unknown protein 6 unknown protein 6 -0.66 0.32 -0.33
112 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.65 0.31 -0.3
113 AT1G80440 Galactose oxidase/kelch repeat superfamily protein -0.65 0.31 -0.31
114 AT2G18670 RING/U-box superfamily protein -0.65 0.33 -0.35
115 AT3G13672 TRAF-like superfamily protein -0.65 0.33 -0.33
116 AT5G25280 serine-rich protein-related -0.65 0.29 -0.31
117 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.64 0.31 -0.32
118 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.64 0.32 -0.32
119 AT1G72650 TRF-like 6 TRF-like 6 -0.64 0.31 -0.33
120 AT5G57670 Protein kinase superfamily protein -0.64 0.32 -0.29
121 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.63 0.3 -0.31
122 AT2G36640 embryonic cell protein 63 embryonic cell protein 63,
embryonic cell protein 63		 -0.63 0.31 -0.31
123 AT3G26510 Octicosapeptide/Phox/Bem1p family protein -0.63 0.33 -0.32
124 AT4G18990 xyloglucan endotransglucosylase/hydrolase 29 xyloglucan
endotransglucosylase/hydrolase 29		 -0.63 0.33 -0.32
125 AT2G46690 SAUR-like auxin-responsive protein family -0.63 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.74 0.32 -0.31 C0142
127 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.74 0.41 -0.47 C0056
128 C0010 myo-Inositol-1-phosphate D,L-myo-Inositol-1-phosphate 1D-myo-Inositol (3)-phosphate myo-inositol biosynthesis,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) 		-0.74 0.46 -0.46 C0010
129 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.69 0.31 -0.32 C0054
130 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.69 0.46 -0.45 C0053
131 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.67 0.31 -0.32 C0097
132 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.66 0.46 -0.43 C0099
133 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.66 0.45 -0.43 C0032
134 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.65 0.43 -0.43 C0234