AT3G42710 : -
Query Information
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AGICode AT3G42710
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G42710 transposable element gene 1 0.34 -0.32
2 AT2G36040 transposable element gene -0.68 0.32 -0.3
3 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.68 0.32 -0.33
4 AT2G40740 WRKY DNA-binding protein 55 WRKY DNA-BINDING PROTEIN 55, WRKY
DNA-binding protein 55		 0.67 0.32 -0.32
5 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.64 0.29 -0.29
6 AT3G43940 unknown protein; Has 24 Blast hits to 24 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.32 -0.3
7 AT3G55590 Glucose-1-phosphate adenylyltransferase family protein -0.63 0.31 -0.31
8 AT1G67440 Minichromosome maintenance (MCM2/3/5) family protein embryo defective 1688 -0.63 0.33 -0.31
9 AT2G15520 transposable element gene -0.63 0.3 -0.32
10 AT1G27960 evolutionarily conserved C-terminal region 9 evolutionarily conserved
C-terminal region 9		 -0.62 0.33 -0.31
11 AT1G56345 Pseudouridine synthase family protein 0.6 0.33 -0.32
12 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 0.59 0.32 -0.32
13 AT3G23130 C2H2 and C2HC zinc fingers superfamily protein FLORAL DEFECTIVE 10, FLORAL ORGAN
NUMBER 1, SUPERMAN		 -0.59 0.32 -0.31
14 AT2G46375 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.29 -0.32
15 AT1G78950 Terpenoid cyclases family protein -0.59 0.31 -0.33
16 AT2G17340 Uncharacterised conserved protein (UCP030210) -0.58 0.3 -0.32
17 AT2G13920 pseudogene, CHP-rich zinc finger protein, putative,
contains weak PHD zinc finger motifscontains weak PHD zinc
finger motifsDC1 domain, a divergent protein kinase C
domain of unknown function.		 -0.58 0.3 -0.31
18 AT2G03110 RNA binding;nucleic acid binding -0.58 0.29 -0.32
19 AT3G43390 transposable element gene 0.58 0.31 -0.3
20 AT4G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.57 0.34 -0.3
21 AT2G34840 Coatomer epsilon subunit -0.57 0.31 -0.34
22 AT1G56710 Pectin lyase-like superfamily protein -0.57 0.3 -0.3
23 AT4G03520 Thioredoxin superfamily protein ATHM2 -0.57 0.32 -0.33
24 AT1G39350 transposable element gene -0.57 0.32 -0.32
25 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) 0.57 0.3 -0.32
26 AT3G19530 BEST Arabidopsis thaliana protein match is:
Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain (TAIR:AT3G19510.1); Has 10 Blast hits to 10
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.31 -0.32
27 AT3G43900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43910.1); Has 15 Blast hits
to 15 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.32 -0.31
28 AT5G39910 Pectin lyase-like superfamily protein -0.56 0.31 -0.32
29 AT5G16920 Fasciclin-like arabinogalactan family protein 0.55 0.32 -0.32
30 AT5G29090 transposable element gene -0.55 0.34 -0.34
31 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.55 0.31 -0.33
32 AT5G25860 F-box/RNI-like superfamily protein -0.55 0.34 -0.31
33 AT5G57670 Protein kinase superfamily protein -0.55 0.32 -0.3
34 AT1G63600 Receptor-like protein kinase-related family protein -0.54 0.32 -0.29
35 AT3G56270 Plant protein of unknown function (DUF827) -0.54 0.33 -0.35
36 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.32 -0.32
37 AT5G27810 MADS-box transcription factor family protein -0.54 0.33 -0.3
38 AT2G34540 unknown protein; Has 19 Blast hits to 19 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.31 -0.31
39 AT1G48070 Thioredoxin superfamily protein 0.54 0.31 -0.33
40 AT4G30520 Leucine-rich repeat protein kinase family protein SENESCENCE-ASSOCIATED
RECEPTOR-LIKE KINASE		 -0.53 0.32 -0.34
41 AT2G24920 transposable element gene -0.53 0.3 -0.33
42 AT5G42955 Protein of unknown function (DUF784) -0.53 0.31 -0.31
43 AT1G53360 F-box associated ubiquitination effector family protein -0.53 0.3 -0.32
44 AT3G24270 pumilio 25 pumilio 25, pumilio 25 -0.53 0.33 -0.31
45 AT1G30790 F-box and associated interaction domains-containing protein -0.53 0.31 -0.3
46 AT1G32600 F-box associated ubiquitination effector family protein -0.53 0.34 -0.33
47 AT5G05290 expansin A2 ATEXP2, expansin A2, ATHEXP ALPHA
1.12, EXPANSIN 2, expansin A2		 0.52 0.32 -0.36
48 AT1G49015 DPP6 N-terminal domain-like protein 0.52 0.34 -0.33
49 AT5G38160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.52 0.3 -0.31
50 AT1G28590 GDSL-like Lipase/Acylhydrolase superfamily protein -0.52 0.29 -0.34
51 AT4G16930 Toll-Interleukin-Resistance (TIR) domain-containing protein 0.52 0.31 -0.31
52 AT3G05780 lon protease 3 lon protease 3 0.51 0.3 -0.36
53 AT4G09390 transposable element gene -0.51 0.31 -0.3
54 AT4G13700 purple acid phosphatase 23 ATPAP23, purple acid phosphatase
23		 -0.51 0.34 -0.32
55 AT2G32790 Ubiquitin-conjugating enzyme family protein -0.51 0.32 -0.3
56 AT4G32270 Ubiquitin-like superfamily protein -0.51 0.32 -0.31
57 AT5G26840 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.5 0.29 -0.33
58 AT5G35300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.5 0.33 -0.32
59 AT2G37910 cation/hydrogen exchanger, putative (CHX21) -0.5 0.33 -0.31
60 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein -0.5 0.33 -0.31
61 AT1G04380 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.5 0.3 -0.3
62 ATCG01010 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein NDHF -0.5 0.34 -0.31
63 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.5 0.31 -0.31
64 AT2G20595 highly expressed in the female gametophyte central cell
and expressed at low levels in the egg and synergids		 0.49 0.31 -0.31
65 AT4G39380 BEST Arabidopsis thaliana protein match is: TSL-kinase
interacting protein 1 (TAIR:AT2G36960.3); Has 80 Blast hits
to 74 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.49 0.31 -0.31
66 AT3G20210 delta vacuolar processing enzyme delta vacuolar processing enzyme,
DELTA VACUOLAR PROCESSING ENZYME		 0.47 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0159 MST_1505.6 - - - -0.72 0.43 -0.45
68 C0162 MST_1588.3 - - - -0.68 0.49 -0.43
69 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.67 0.44 -0.45 C0234
70 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.61 0.46 -0.41 C0087
71 C0006 β-Homothreonine L-β-Homothreonine - - -0.6 0.43 -0.43
72 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.58 0.42 -0.48 C0261
73 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		-0.54 0.29 -0.3 C0005
74 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		-0.52 0.3 -0.31 C0022
75 C0114 Homocystine L-Homocystine - - -0.51 0.29 -0.32