AT4G35050 : MULTICOPY SUPPRESSOR OF IRA1 3
Query Information
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AGICode AT4G35050
Description Transducin family protein / WD-40 repeat family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 1 0.33 -0.32
2 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.81 0.31 -0.32
3 AT5G02050 Mitochondrial glycoprotein family protein 0.81 0.33 -0.34
4 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.79 0.32 -0.31
5 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 0.78 0.32 -0.32
6 AT3G01790 Ribosomal protein L13 family protein 0.78 0.31 -0.31
7 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.31 -0.32
8 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.77 0.32 -0.31
9 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 0.75 0.33 -0.31
10 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.3 -0.32
11 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 0.75 0.3 -0.33
12 AT1G23100 GroES-like family protein 0.74 0.3 -0.33
13 AT5G12410 THUMP domain-containing protein 0.74 0.32 -0.31
14 AT3G49320 Metal-dependent protein hydrolase 0.74 0.32 -0.31
15 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.31 -0.31
16 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 0.73 0.33 -0.32
17 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 0.72 0.31 -0.31
18 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.32 -0.33
19 AT3G07590 Small nuclear ribonucleoprotein family protein 0.72 0.32 -0.33
20 AT1G07615 GTP-binding protein Obg/CgtA 0.71 0.32 -0.31
21 AT1G19835 Plant protein of unknown function (DUF869) -0.71 0.31 -0.31
22 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.7 0.32 -0.33
23 AT2G30000 PHF5-like protein 0.7 0.33 -0.31
24 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 0.7 0.33 -0.33
25 AT2G37020 Translin family protein 0.7 0.3 -0.35
26 AT1G14620 decoy DECOY 0.7 0.32 -0.31
27 AT1G73940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits
to 54 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.33
28 AT5G53770 Nucleotidyltransferase family protein 0.69 0.32 -0.3
29 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 -0.68 0.3 -0.31
30 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 -0.68 0.32 -0.31
31 AT1G80720 Mitochondrial glycoprotein family protein 0.68 0.32 -0.3
32 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.3 -0.32
33 AT5G22790 reticulata-related 1 reticulata-related 1 0.68 0.33 -0.31
34 AT3G15140 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.67 0.31 -0.3
35 AT5G13850 nascent polypeptide-associated complex subunit alpha-like
protein 3		 nascent polypeptide-associated
complex subunit alpha-like protein
3		 0.67 0.31 -0.32
36 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 -0.67 0.31 -0.33
37 AT4G02930 GTP binding Elongation factor Tu family protein 0.67 0.32 -0.33
38 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 0.66 0.32 -0.31
39 AT1G23320 tryptophan aminotransferase related 1 tryptophan aminotransferase
related 1		 0.66 0.3 -0.31
40 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.66 0.33 -0.3
41 AT5G09770 Ribosomal protein L17 family protein 0.66 0.3 -0.32
42 AT1G72650 TRF-like 6 TRF-like 6 -0.66 0.31 -0.33
43 AT3G43100 transposable element gene -0.65 0.33 -0.32
44 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.65 0.33 -0.33
45 AT3G12570 FYD FYD 0.65 0.3 -0.31
46 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.65 0.31 -0.32
47 AT1G16730 unknown protein 6 unknown protein 6 -0.65 0.32 -0.31
48 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.64 0.33 -0.32
49 AT5G18110 novel cap-binding protein novel cap-binding protein 0.64 0.31 -0.31
50 AT3G04890 Uncharacterized conserved protein (DUF2358) -0.64 0.3 -0.3
51 AT5G51130 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.32 -0.3
52 AT3G17290 transposable element gene -0.63 0.32 -0.31
53 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.63 0.32 -0.3
54 AT4G21650 Subtilase family protein -0.63 0.31 -0.35
55 AT5G14510 ARM repeat superfamily protein -0.63 0.32 -0.3
56 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.63 0.31 -0.33
57 AT1G30790 F-box and associated interaction domains-containing protein -0.63 0.31 -0.29
58 AT3G03620 MATE efflux family protein -0.62 0.31 -0.31
59 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 -0.62 0.31 -0.33
60 AT3G56050 Protein kinase family protein -0.62 0.33 -0.31
61 AT5G27950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.3
62 AT4G05600 transposable element gene -0.62 0.3 -0.32
63 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.62 0.34 -0.31
64 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 -0.62 0.33 -0.3
65 AT5G26190 Cysteine/Histidine-rich C1 domain family protein -0.62 0.28 -0.31
66 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.61 0.32 -0.32
67 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.61 0.33 -0.33
68 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.6 0.34 -0.34
69 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.6 0.33 -0.3
70 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.59 0.33 -0.31
71 AT5G37610 Eukaryotic porin family protein -0.59 0.3 -0.29
72 AT1G05030 Major facilitator superfamily protein -0.58 0.3 -0.31
73 AT1G56710 Pectin lyase-like superfamily protein -0.57 0.31 -0.31
74 AT1G77740 phosphatidylinositol-4-phosphate 5-kinase 2 phosphatidylinositol-4-phosphate
5-kinase 2		 -0.57 0.32 -0.3
75 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.31 -0.33
76 AT1G60270 beta glucosidase 6 beta glucosidase 6 -0.57 0.32 -0.31
77 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.57 0.31 -0.32
78 AT2G17680 Arabidopsis protein of unknown function (DUF241) -0.57 0.32 -0.32
79 AT1G33070 MADS-box family protein -0.57 0.29 -0.32
80 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.34 -0.33
81 AT3G17920 Outer arm dynein light chain 1 protein -0.56 0.31 -0.32
82 AT4G27850 Glycine-rich protein family -0.56 0.29 -0.31
83 AT5G43410 Integrase-type DNA-binding superfamily protein -0.55 0.34 -0.3
84 AT5G38220 alpha/beta-Hydrolases superfamily protein -0.55 0.29 -0.3
85 AT2G29970 Double Clp-N motif-containing P-loop nucleoside
triphosphate hydrolases superfamily protein		 -0.55 0.31 -0.31
86 AT5G58830 Subtilisin-like serine endopeptidase family protein -0.55 0.34 -0.32
87 AT3G30340 nodulin MtN21 /EamA-like transporter family protein -0.55 0.32 -0.32
88 AT1G77270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits
to 388 proteins in 92 species: Archae - 0; Bacteria - 31;
Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other
Eukaryotes - 101 (source: NCBI BLink).		 -0.55 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis 		-0.8 0.44 -0.44 C0057
90 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.78 0.44 -0.45 C0030
91 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.76 0.45 -0.41 C0056
92 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.7 0.43 -0.47 C0234
93 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.68 0.46 -0.44 C0099
94 C0094 Galactosamine D-Galactosamine - - -0.66 0.45 -0.44
95 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.64 0.41 -0.47 C0053
96 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.61 0.48 -0.43 C0262
97 C0006 β-Homothreonine L-β-Homothreonine - - -0.61 0.42 -0.44
98 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.6 0.46 -0.44 C0261
99 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.59 0.45 -0.43 C0088
100 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		-0.56 0.31 -0.28 C0066