AT4G33390 : -
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G33390
Description Plant protein of unknown function (DUF827)
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G33390 Plant protein of unknown function (DUF827) 1 0.33 -0.34
2 AT2G43420 3-beta hydroxysteroid dehydrogenase/isomerase family
protein
-0.7 0.32 -0.33
3 AT1G50650 Stigma-specific Stig1 family protein 0.69 0.33 -0.31
4 AT3G47660 Regulator of chromosome condensation (RCC1) family protein 0.69 0.32 -0.33
5 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein
DEI1, PASTICCINO 1 -0.69 0.31 -0.3
6 AT2G26490 Transducin/WD40 repeat-like superfamily protein 0.68 0.31 -0.32
7 AT1G49230 RING/U-box superfamily protein 0.67 0.31 -0.3
8 AT4G25610 C2H2-like zinc finger protein 0.67 0.3 -0.32
9 AT1G71770 poly(A)-binding protein 5 poly(A)-binding protein 5 0.67 0.3 -0.32
10 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43
-0.66 0.32 -0.31
11 AT4G35930 F-box family protein 0.66 0.34 -0.33
12 AT2G43270 F-box and associated interaction domains-containing protein 0.66 0.33 -0.32
13 AT3G03400 EF hand calcium-binding protein family 0.65 0.33 -0.33
14 AT1G26260 cryptochrome-interacting basic-helix-loop-helix 5 cryptochrome-interacting
basic-helix-loop-helix 5
-0.65 0.31 -0.31
15 AT2G17975 zinc finger (Ran-binding) family protein -0.65 0.34 -0.31
16 AT3G04280 response regulator 22 response regulator 22, response
regulator 22
0.65 0.32 -0.31
17 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}
-0.65 0.29 -0.31
18 AT5G39650 Protein of unknown function (DUF679) DUO1-activated unknown 2 -0.64 0.31 -0.33
19 AT5G49945 Protein of unknown function (DUF1682) 0.64 0.31 -0.3
20 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.64 0.31 -0.35
21 AT4G17160 RAB GTPase homolog B1A ATRAB2B, RAB GTPase homolog B1A,
RAB GTPase homolog B1A
0.64 0.31 -0.31
22 AT1G49560 Homeodomain-like superfamily protein 0.63 0.32 -0.33
23 AT3G18670 Ankyrin repeat family protein 0.63 0.33 -0.33
24 AT1G09290 unknown protein; Has 73 Blast hits to 71 proteins in 26
species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 11;
Plants - 54; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).
0.63 0.32 -0.3
25 AT1G28160 Integrase-type DNA-binding superfamily protein 0.63 0.3 -0.33
26 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 -0.63 0.31 -0.31
27 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.63 0.3 -0.35
28 AT2G28030 Eukaryotic aspartyl protease family protein 0.63 0.31 -0.33
29 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
0.63 0.32 -0.32
30 AT2G02380 glutathione S-transferase (class zeta) 2 glutathione S-transferase (class
zeta) 2, glutathione S-transferase
(class zeta) 2
-0.63 0.33 -0.33
31 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2
-0.63 0.34 -0.31
32 AT3G16730 CONTAINS InterPro DOMAIN/s: Non-SMC condensin II complex,
subunit H2-like (InterPro:IPR009378); Has 249 Blast hits to
211 proteins in 82 species: Archae - 0; Bacteria - 0;
Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).
hypersensitive to excess boron 2 0.63 0.31 -0.31
33 AT3G12950 Trypsin family protein -0.62 0.33 -0.34
34 AT1G65910 NAC domain containing protein 28 NAC domain containing protein 28,
NAC domain containing protein 28
0.62 0.32 -0.32
35 AT1G67000 Protein kinase superfamily protein -0.62 0.31 -0.31
36 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease
-0.62 0.31 -0.33
37 AT1G30300 Metallo-hydrolase/oxidoreductase superfamily protein -0.62 0.31 -0.3
38 AT4G39410 WRKY DNA-binding protein 13 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 13, WRKY
DNA-binding protein 13
0.62 0.32 -0.31
39 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily 0.61 0.33 -0.3
40 AT2G21490 dehydrin LEA dehydrin LEA -0.61 0.33 -0.32
41 AT1G36150 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
-0.6 0.33 -0.33
42 AT1G65670 cytochrome P450, family 702, subfamily A, polypeptide 1 cytochrome P450, family 702,
subfamily A, polypeptide 1
-0.6 0.31 -0.3
43 ATMG00400 hypothetical protein ORF157 -0.6 0.32 -0.33
44 AT4G23580 Galactose oxidase/kelch repeat superfamily protein 0.6 0.33 -0.31
45 AT2G28680 RmlC-like cupins superfamily protein -0.6 0.32 -0.32
46 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein
-0.6 0.29 -0.34
47 AT2G22530 Alkaline-phosphatase-like family protein -0.6 0.3 -0.33
48 AT5G09690 magnesium transporter 7 ARABIDOPSIS THALIANA MAGNESIUM
TRANSPORTER 7, magnesium
transporter 7, MRS2-7
-0.6 0.32 -0.32
49 AT2G30690 Protein of unknown function, DUF593 0.59 0.29 -0.31
50 AT5G47560 tonoplast dicarboxylate transporter ATSDAT, TONOPLAST DICARBOXYLATE
TRANSPORTER, tonoplast
dicarboxylate transporter
-0.59 0.31 -0.33
51 AT2G24370 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain
-0.59 0.32 -0.32
52 AT1G63560 Receptor-like protein kinase-related family protein -0.59 0.3 -0.32
53 AT5G52740 Copper transport protein family 0.59 0.31 -0.31
54 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 0.59 0.3 -0.3
55 AT1G69490 NAC-like, activated by AP3/PI Arabidopsis NAC domain containing
protein 29, NAC-LIKE, ACTIVATED BY
AP3/PI, NAC-like, activated by
AP3/PI
-0.59 0.33 -0.32
56 AT2G45930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G16090.1); Has 161 Blast hits to
161 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.59 0.3 -0.31
57 AT2G37720 TRICHOME BIREFRINGENCE-LIKE 15 TRICHOME BIREFRINGENCE-LIKE 15 0.59 0.31 -0.3
58 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).
-0.59 0.31 -0.31
59 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.59 0.35 -0.31
60 AT4G09080 Outer membrane OMP85 family protein TRANSLOCON OUTER MEMBRANE COMPLEX
75-IV, translocon at the outer
envelope membrane of chloroplasts
75-IV
0.58 0.31 -0.32
61 AT5G03455 Rhodanese/Cell cycle control phosphatase superfamily
protein
ARSENATE REDUCTASE 2, ARATH;CDC25,
CDC25
-0.58 0.3 -0.31
62 AT1G62914 pentatricopeptide (PPR) repeat-containing protein -0.58 0.33 -0.34
63 AT5G37610 Eukaryotic porin family protein -0.58 0.31 -0.34
64 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.58 0.31 -0.31
65 AT5G28240 transposable element gene 0.58 0.31 -0.29
66 AT2G25140 casein lytic proteinase B4 CASEIN LYTIC PROTEINASE B-M,
casein lytic proteinase B4, HEAT
SHOCK PROTEIN 98.7
-0.58 0.32 -0.3
67 AT1G26310 K-box region and MADS-box transcription factor family
protein
AGAMOUS-like 10, CAULIFLOWER, CAL1 0.58 0.31 -0.32
68 AT2G47300 ribonuclease Ps 0.58 0.33 -0.31
69 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
0.57 0.3 -0.32
70 AT2G38890 unknown protein; Has 58 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).
-0.57 0.35 -0.31
71 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
-0.57 0.31 -0.31
72 AT5G37210 Cysteine/Histidine-rich C1 domain family protein 0.57 0.32 -0.32
73 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
0.57 0.31 -0.31
74 AT5G49310 importin alpha isoform 5 importin alpha isoform 5 0.57 0.32 -0.32
75 AT2G33680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.31 -0.33
76 AT2G06500 hAT family dimerisation domain 0.57 0.34 -0.33
77 AT2G11830 transposable element gene 0.57 0.31 -0.3
78 AT4G13020 Protein kinase superfamily protein MHK -0.57 0.33 -0.3
79 AT2G25740 ATP-dependent protease La (LON) domain protein -0.57 0.32 -0.3
80 AT2G26940 C2H2-type zinc finger family protein 0.56 0.31 -0.33
81 AT3G11040 Glycosyl hydrolase family 85 AtENGase85B,
Endo-beta-N-acetyglucosaminidase
85B
-0.56 0.33 -0.32
82 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 -0.56 0.32 -0.33
83 AT3G19610 Plant protein of unknown function (DUF936) 0.56 0.33 -0.31
84 AT5G17320 homeodomain GLABROUS 9 homeodomain GLABROUS 9 0.56 0.31 -0.3
85 AT2G04063 glycine-rich protein 0.56 0.31 -0.31
86 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein 0.56 0.33 -0.3
87 AT2G39280 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.55 0.33 -0.35
88 AT1G35970 transposable element gene -0.55 0.33 -0.29
89 AT1G33130 transposable element gene 0.55 0.31 -0.32
90 AT3G28170 unknown protein; Has 2 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.55 0.31 -0.31
91 AT3G42730 transposable element gene 0.55 0.31 -0.33
92 AT3G43860 glycosyl hydrolase 9A4 glycosyl hydrolase 9A4, glycosyl
hydrolase 9A4
0.55 0.31 -0.32
93 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107
0.55 0.32 -0.3
94 AT5G22720 F-box/RNI-like superfamily protein -0.55 0.32 -0.31
95 AT3G09660 minichromosome maintenance 8 minichromosome maintenance 8 -0.54 0.32 -0.29
96 AT2G20790 clathrin adaptor complexes medium subunit family protein -0.54 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I
-0.7 0.44 -0.42 C0091
98 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.69 0.45 -0.46 C0099
99 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II
-0.69 0.47 -0.46 C0053
100 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II
-0.67 0.43 -0.46 C0186
101 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis
-0.66 0.44 -0.44 C0262
102 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.63 0.43 -0.44 C0234
103 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.6 0.44 -0.45 C0075