AGICode | AT4G22800 |
Description | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G22800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.34 | -0.31 | |||
2 | AT2G43930 | Protein kinase superfamily protein | -0.69 | 0.32 | -0.3 | |||
3 | AT3G05320 | O-fucosyltransferase family protein | -0.66 | 0.34 | -0.32 | |||
4 | AT1G06050 | Protein of unknown function (DUF1336) | -0.64 | 0.31 | -0.32 | |||
5 | AT1G06110 | SKP1/ASK-interacting protein 16 | SKP1/ASK-interacting protein 16 | 0.63 | 0.32 | -0.32 | ||
6 | AT2G16690 | transposable element gene | 0.6 | 0.33 | -0.35 | |||
7 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
0.6 | 0.32 | -0.3 | ||
8 | AT1G16980 | trehalose-phosphatase/synthase 2 | trehalose-phosphatase/synthase 2, TREHALOSE -6-PHOSPHATASE SYNTHASE S2, trehalose-phosphatase/synthase 2 |
0.59 | 0.32 | -0.31 | ||
9 | AT2G05950 | transposable element gene | 0.59 | 0.31 | -0.3 | |||
10 | ATMG00740 | hypothetical protein | ORF100A | 0.58 | 0.33 | -0.33 | ||
11 | AT5G44260 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.58 | 0.31 | -0.31 | |||
12 | AT1G50140 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.58 | 0.34 | -0.3 | |||
13 | AT1G60970 | SNARE-like superfamily protein | 0.58 | 0.31 | -0.3 | |||
14 | AT5G04180 | alpha carbonic anhydrase 3 | alpha carbonic anhydrase 3, ALPHA CARBONIC ANHYDRASE 3 |
0.58 | 0.31 | -0.31 | ||
15 | AT5G30440 | transposable element gene | 0.58 | 0.31 | -0.32 | |||
16 | AT3G56270 | Plant protein of unknown function (DUF827) | 0.57 | 0.29 | -0.33 | |||
17 | AT1G28340 | receptor like protein 4 | receptor like protein 4, receptor like protein 4 |
-0.57 | 0.31 | -0.31 | ||
18 | AT4G21800 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
quatre-quart2 | -0.57 | 0.32 | -0.33 | ||
19 | AT1G41797 | transposable element gene | 0.57 | 0.32 | -0.3 | |||
20 | AT3G08730 | protein-serine kinase 1 | ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 1, ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 6, ATS6K1, protein-serine kinase 1, ROTEIN-SERINE KINASE 6, P70 RIBOSOMAL S6 KINASE |
-0.55 | 0.29 | -0.28 | ||
21 | AT2G01770 | vacuolar iron transporter 1 | ATVIT1, vacuolar iron transporter 1 |
-0.55 | 0.32 | -0.3 | ||
22 | AT3G01240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01230.1); Has 12 Blast hits to 12 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.55 | 0.33 | -0.31 | |||
23 | AT3G24130 | Pectin lyase-like superfamily protein | -0.55 | 0.34 | -0.31 | |||
24 | AT1G14560 | Mitochondrial substrate carrier family protein | -0.54 | 0.32 | -0.33 | |||
25 | AT5G43480 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.54 | 0.3 | -0.33 | |||
26 | AT3G17490 | F-box and associated interaction domains-containing protein | 0.54 | 0.32 | -0.32 | |||
27 | AT1G67060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 283 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 145; Metazoa - 0; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). |
-0.53 | 0.3 | -0.33 | |||
28 | AT2G05020 | transposable element gene | -0.53 | 0.31 | -0.33 | |||
29 | AT3G23270 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
0.53 | 0.33 | -0.31 | |||
30 | AT2G07300 | transposable element gene | -0.52 | 0.34 | -0.32 | |||
31 | AT2G11890 | adenylate cyclases | -0.52 | 0.31 | -0.32 | |||
32 | AT4G11020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.52 | 0.3 | -0.29 | |||
33 | AT3G26860 | Plant self-incompatibility protein S1 family | 0.52 | 0.31 | -0.31 | |||
34 | AT3G10990 | F-box associated ubiquitination effector family protein | 0.52 | 0.31 | -0.32 | |||
35 | AT4G39180 | Sec14p-like phosphatidylinositol transfer family protein | ARABIDOPSIS THALIANA SECRETION 14, SECRETION 14 |
0.51 | 0.34 | -0.33 | ||
36 | AT3G55550 | Concanavalin A-like lectin protein kinase family protein | -0.51 | 0.31 | -0.32 | |||
37 | AT2G23140 | RING/U-box superfamily protein with ARM repeat domain | -0.51 | 0.31 | -0.32 | |||
38 | AT2G22450 | riboflavin biosynthesis protein, putative | 0.51 | 0.32 | -0.32 | |||
39 | AT1G70000 | myb-like transcription factor family protein | -0.51 | 0.33 | -0.32 | |||
40 | AT5G14870 | cyclic nucleotide-gated channel 18 | CYCLIC NUCLEOTIDE-GATED CHANNEL 18, cyclic nucleotide-gated channel 18 |
-0.51 | 0.32 | -0.34 | ||
41 | AT5G16460 | Putative adipose-regulatory protein (Seipin) | 0.5 | 0.31 | -0.31 | |||
42 | AT3G24060 | Plant self-incompatibility protein S1 family | -0.5 | 0.32 | -0.32 | |||
43 | AT1G32880 | ARM repeat superfamily protein | -0.5 | 0.31 | -0.31 | |||
44 | AT3G23650 | protein kinase-related | 0.5 | 0.31 | -0.33 | |||
45 | AT4G02490 | transposable element gene | 0.5 | 0.31 | -0.33 | |||
46 | AT2G04890 | SCARECROW-like 21 | SCARECROW-like 21 | 0.5 | 0.33 | -0.33 | ||
47 | AT1G37060 | transposable element gene | -0.49 | 0.32 | -0.31 | |||
48 | AT2G04840 | Protein of unknown function (DUF295) | -0.49 | 0.31 | -0.3 | |||
49 | AT1G20290 | SWI-SNF-related chromatin binding protein | -0.49 | 0.34 | -0.3 | |||
50 | AT4G03500 | Ankyrin repeat family protein | -0.49 | 0.29 | -0.3 | |||
51 | AT2G33320 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.48 | 0.32 | -0.32 | |||
52 | AT3G03750 | SET domain protein 20 | SET domain protein 20, SUVR3 | -0.48 | 0.32 | -0.32 | ||
53 | AT2G20540 | mitochondrial editing factor 21 | mitochondrial editing factor 21 | 0.48 | 0.33 | -0.32 | ||
54 | AT1G35410 | Protein of unknown function (DUF1184) | -0.48 | 0.3 | -0.31 | |||
55 | AT1G69560 | myb domain protein 105 | MYB DOMAIN PROTEIN 105, LATERAL ORGAN FUSION 2, myb domain protein 105 |
0.48 | 0.3 | -0.3 | ||
56 | AT3G26390 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39782.1); Has 16 Blast hits to 16 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.48 | 0.31 | -0.33 | |||
57 | AT3G50580 | LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: ECA1 gametogenesis related family protein (TAIR:AT1G44191.1); Has 132049 Blast hits to 55074 proteins in 2314 species: Archae - 393; Bacteria - 25609; Metazoa - 44661; Fungi - 17591; Plants - 17316; Viruses - 4153; Other Eukaryotes - 22326 (source: NCBI BLink). |
-0.48 | 0.33 | -0.32 | |||
58 | AT4G31930 | Mitochondrial glycoprotein family protein | 0.47 | 0.31 | -0.31 | |||
59 | AT2G02360 | phloem protein 2-B10 | phloem protein 2-B10, phloem protein 2-B10 |
-0.47 | 0.33 | -0.34 | ||
60 | AT2G39910 | ARM repeat superfamily protein | -0.47 | 0.33 | -0.32 | |||
61 | AT3G46800 | Cysteine/Histidine-rich C1 domain family protein | 0.47 | 0.33 | -0.31 | |||
62 | AT3G61090 | Putative endonuclease or glycosyl hydrolase | -0.46 | 0.3 | -0.31 | |||
63 | AT2G01690 | ARM repeat superfamily protein | -0.46 | 0.32 | -0.3 | |||
64 | AT2G40260 | Homeodomain-like superfamily protein | -0.45 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
65 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.77 | 0.43 | -0.42 | ||
66 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.75 | 0.44 | -0.43 | ||
67 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | 0.74 | 0.43 | -0.45 | ||
68 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.71 | 0.44 | -0.44 | ||
69 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.69 | 0.45 | -0.44 | ||
70 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | 0.66 | 0.43 | -0.46 | ||
71 | C0062 | Betain | - | - | - | 0.61 | 0.31 | -0.32 | ||
72 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
0.6 | 0.3 | -0.32 | ||
73 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.58 | 0.31 | -0.31 | ||
74 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
0.56 | 0.29 | -0.33 | ||
75 | C0061 | Aspartic acid | L-Aspartic acid | L-Aspartate | purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging, indole-3-acetyl-amino acid biosynthesis, citrulline-nitric oxide cycle, asparagine degradation I, cyanide detoxification II, asparagine biosynthesis I, asparagine biosynthesis III (tRNA-dependent), arginine biosynthesis I, inosine-5'-phosphate biosynthesis II, uridine-5'-phosphate biosynthesis, aspartate biosynthesis, homoserine biosynthesis, lysine biosynthesis VI, aspartate degradation II, urea cycle, purine nucleotides de novo biosynthesis II, NAD biosynthesis I (from aspartate), IAA degradation IV, arginine biosynthesis II (acetyl cycle) |
0.53 | 0.32 | -0.31 | ||
76 | C0112 | Histidine | L-Histidine | L-Histidine | tRNA charging, histidine biosynthesis |
0.51 | 0.31 | -0.31 |