AT4G12890 : -
Query Information
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AGICode AT4G12890
Description Gamma interferon responsive lysosomal thiol (GILT) reductase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G12890 Gamma interferon responsive lysosomal thiol (GILT)
reductase family protein		 1 0.3 -0.31
2 AT5G17600 RING/U-box superfamily protein 0.84 0.31 -0.31
3 AT1G01920 SET domain-containing protein -0.79 0.3 -0.32
4 AT1G60750 NAD(P)-linked oxidoreductase superfamily protein -0.78 0.34 -0.3
5 AT5G45650 subtilase family protein 0.78 0.3 -0.33
6 AT3G04670 WRKY DNA-binding protein 39 WRKY DNA-BINDING PROTEIN 39, WRKY
DNA-binding protein 39		 -0.76 0.32 -0.31
7 AT2G26300 G protein alpha subunit 1 ARABIDOPSIS THALIANA G PROTEIN
ALPHA SUBUNIT 1, G protein alpha
subunit 1, G PROTEIN ALPHA SUBUNIT
1		 -0.75 0.3 -0.32
8 AT1G24340 FAD/NAD(P)-binding oxidoreductase family protein EMBRYO DEFECTIVE 2421, EMBRYO
DEFECTIVE 260		 -0.73 0.29 -0.3
9 AT4G23130 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 cysteine-rich RLK (RECEPTOR-like
protein kinase) 5, RECEPTOR-LIKE
PROTEIN KINASE 6		 0.73 0.32 -0.32
10 AT2G31945 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits
to 61 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.33 -0.32
11 AT1G13110 cytochrome P450, family 71 subfamily B, polypeptide 7 cytochrome P450, family 71
subfamily B, polypeptide 7		 0.73 0.31 -0.34
12 AT1G21270 wall-associated kinase 2 wall-associated kinase 2 0.73 0.31 -0.31
13 AT5G06670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.33 -0.32
14 AT2G47750 putative indole-3-acetic acid-amido synthetase GH3.9 putative indole-3-acetic
acid-amido synthetase GH3.9		 0.7 0.32 -0.3
15 AT2G39550 Prenyltransferase family protein GERANYLGERANYLTRANSFERASE-I BETA
SUBUNIT, GGB, PGGT-I		 -0.7 0.3 -0.31
16 AT1G12640 MBOAT (membrane bound O-acyl transferase) family protein -0.7 0.3 -0.32
17 AT2G29480 glutathione S-transferase tau 2 glutathione S-transferase tau 2,
GLUTATHIONE S-TRANSFERASE 20,
glutathione S-transferase tau 2		 -0.7 0.32 -0.29
18 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.69 0.3 -0.3
19 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.69 0.32 -0.32
20 AT4G16690 methyl esterase 16 ARABIDOPSIS THALIANA METHYL
ESTERASE 16, methyl esterase 16		 -0.68 0.29 -0.3
21 AT4G10610 CTC-interacting domain 12 ATRBP37, CTC-interacting domain
12, RNA-BINDING PROTEIN 37		 -0.68 0.31 -0.31
22 AT5G63410 Leucine-rich repeat protein kinase family protein 0.68 0.31 -0.31
23 AT2G02710 PAS/LOV protein B PAS/LOV PROTEIN, PAS/LOV PROTEIN
A, PAS/LOV protein B, PAS/LOV
PROTEIN C		 -0.68 0.32 -0.32
24 AT1G20620 catalase 3 ATCAT3, catalase 3, SENESCENCE 2 0.68 0.31 -0.33
25 AT1G80520 Sterile alpha motif (SAM) domain-containing protein 0.67 0.33 -0.33
26 AT1G75400 RING/U-box superfamily protein -0.66 0.32 -0.31
27 AT3G56100 meristematic receptor-like kinase IMK3, meristematic receptor-like
kinase		 0.66 0.3 -0.32
28 AT1G01220 L-fucokinase/GDP-L-fucose pyrophosphorylase Arabidopsis thaliana
L-fucokinase/GDP-L-fucose
pyrophosphorylase,
L-fucokinase/GDP-L-fucose
pyrophosphorylase		 0.66 0.31 -0.31
29 AT5G59130 Subtilase family protein 0.66 0.31 -0.3
30 AT5G21060 Glyceraldehyde-3-phosphate dehydrogenase-like family
protein		 -0.65 0.32 -0.31
31 AT1G80530 Major facilitator superfamily protein 0.65 0.31 -0.32
32 AT3G04980 DNAJ heat shock N-terminal domain-containing protein 0.65 0.31 -0.32
33 AT1G02100 Leucine carboxyl methyltransferase SUPPRESSOR OF BRI1 -0.65 0.3 -0.32
34 AT1G61930 Protein of unknown function, DUF584 0.65 0.3 -0.3
35 AT2G41180 VQ motif-containing protein sigma factor binding protein 2 0.65 0.32 -0.32
36 AT5G54780 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.65 0.3 -0.31
37 AT1G21250 cell wall-associated kinase PRO25, cell wall-associated kinase 0.65 0.32 -0.3
38 AT1G69440 Argonaute family protein ARGONAUTE7, ZIPPY 0.64 0.31 -0.33
39 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.64 0.32 -0.32
40 AT3G57130 Ankyrin repeat family protein / BTB/POZ domain-containing
protein		 BLADE ON PETIOLE 1 0.64 0.3 -0.32
41 AT5G13400 Major facilitator superfamily protein 0.63 0.3 -0.3
42 AT5G44090 Calcium-binding EF-hand family protein -0.63 0.32 -0.34
43 AT2G29680 cell division control 6 ATCDC6, cell division control 6 0.63 0.32 -0.32
44 AT5G62070 IQ-domain 23 IQ-domain 23 0.63 0.3 -0.32
45 AT4G31290 ChaC-like family protein -0.63 0.32 -0.32
46 AT3G01650 RING domain ligase1 RING domain ligase1 -0.62 0.31 -0.34
47 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE -0.62 0.31 -0.32
48 AT3G09900 RAB GTPase homolog E1E ATRAB8E, RAB GTPase homolog E1E,
RAB GTPase homolog E1E		 -0.62 0.31 -0.34
49 AT5G51510 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1352 (InterPro:IPR009787); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.31 -0.3
50 AT5G05930 guanylyl cyclase 1 ARABIDOPSIS GUANYLYL CYCLASE 1,
guanylyl cyclase 1		 -0.62 0.31 -0.3
51 AT1G55520 TATA binding protein 2 A. THALIANA TATA BINDING PROTEIN
2, TATA binding protein 2		 -0.61 0.34 -0.31
52 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.61 0.31 -0.33
53 AT1G24575 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.29 -0.28
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
54 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.79 0.42 -0.45 C0220
55 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.78 0.43 -0.42 C0190
56 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.71 0.45 -0.44
57 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis -0.67 0.42 -0.47
58 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.62 0.45 -0.46 C0186
59 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.61 0.44 -0.45 C0011