AGICode | AT4G08670 |
Description | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G08670 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
1 | 0.32 | -0.3 | |||
2 | AT5G57290 | 60S acidic ribosomal protein family | -0.67 | 0.31 | -0.32 | |||
3 | AT1G21430 | Flavin-binding monooxygenase family protein | YUC11 | 0.65 | 0.3 | -0.32 | ||
4 | AT5G39910 | Pectin lyase-like superfamily protein | 0.63 | 0.32 | -0.32 | |||
5 | AT5G63200 | tetratricopeptide repeat (TPR)-containing protein | 0.63 | 0.29 | -0.32 | |||
6 | AT5G13590 | unknown protein; Has 150 Blast hits to 121 proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). |
0.63 | 0.33 | -0.31 | |||
7 | AT5G09450 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.61 | 0.32 | -0.31 | |||
8 | AT4G29390 | Ribosomal protein S30 family protein | -0.61 | 0.33 | -0.3 | |||
9 | AT3G09820 | adenosine kinase 1 | adenosine kinase 1, ATADK1 | -0.61 | 0.32 | -0.31 | ||
10 | AT3G10700 | galacturonic acid kinase | galacturonic acid kinase | -0.61 | 0.32 | -0.32 | ||
11 | AT3G42460 | transposable element gene | 0.6 | 0.31 | -0.31 | |||
12 | AT2G21195 | unknown protein; Has 28 Blast hits to 28 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.32 | -0.3 | |||
13 | AT2G42700 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.6 | 0.3 | -0.3 | |||
14 | AT3G02630 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
-0.59 | 0.29 | -0.31 | |||
15 | AT2G36040 | transposable element gene | 0.59 | 0.3 | -0.31 | |||
16 | AT1G51340 | MATE efflux family protein | 0.59 | 0.33 | -0.33 | |||
17 | AT2G04520 | Nucleic acid-binding, OB-fold-like protein | -0.59 | 0.31 | -0.32 | |||
18 | AT2G34340 | Protein of unknown function, DUF584 | -0.59 | 0.3 | -0.3 | |||
19 | AT5G46400 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT PRP39-2, PRP39-2 | 0.58 | 0.33 | -0.31 | ||
20 | AT3G17890 | unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.32 | -0.32 | |||
21 | AT1G06970 | cation/hydrogen exchanger 14 | ATCHX14, cation/hydrogen exchanger 14 |
-0.58 | 0.31 | -0.32 | ||
22 | AT3G54230 | suppressor of abi3-5 | suppressor of abi3-5 | 0.58 | 0.33 | -0.31 | ||
23 | AT2G24340 | sequence-specific DNA binding transcription factors | -0.58 | 0.33 | -0.32 | |||
24 | AT2G32000 | DNA topoisomerase, type IA, core | 0.58 | 0.31 | -0.29 | |||
25 | AT5G10880 | tRNA synthetase-related / tRNA ligase-related | 0.58 | 0.29 | -0.33 | |||
26 | AT1G54230 | Winged helix-turn-helix transcription repressor DNA-binding | 0.58 | 0.31 | -0.32 | |||
27 | AT1G68710 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
0.57 | 0.31 | -0.32 | |||
28 | AT5G38400 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.57 | 0.32 | -0.31 | |||
29 | AT1G19390 | Wall-associated kinase family protein | 0.57 | 0.34 | -0.3 | |||
30 | AT5G51880 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.57 | 0.32 | -0.32 | |||
31 | AT1G23820 | spermidine synthase 1 | spermidine synthase 1 | -0.57 | 0.3 | -0.32 | ||
32 | AT5G64850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.56 | 0.32 | -0.3 | |||
33 | AT1G10180 | BEST Arabidopsis thaliana protein match is: exocyst complex component 84B (TAIR:AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.56 | 0.31 | -0.28 | |||
34 | AT4G05370 | BCS1 AAA-type ATPase | -0.55 | 0.33 | -0.3 | |||
35 | AT5G50370 | Adenylate kinase family protein | -0.55 | 0.33 | -0.31 | |||
36 | AT2G39500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.3 | -0.31 | |||
37 | AT4G36510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.32 | -0.33 | |||
38 | AT1G29710 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.55 | 0.31 | -0.31 | |||
39 | AT1G13110 | cytochrome P450, family 71 subfamily B, polypeptide 7 | cytochrome P450, family 71 subfamily B, polypeptide 7 |
-0.55 | 0.28 | -0.32 | ||
40 | AT5G05030 | Protein of Unknown Function (DUF239) | 0.55 | 0.3 | -0.31 | |||
41 | AT1G44318 | Aldolase superfamily protein | hemb2 | 0.54 | 0.3 | -0.3 | ||
42 | AT2G40990 | DHHC-type zinc finger family protein | 0.54 | 0.31 | -0.3 | |||
43 | AT1G70230 | TRICHOME BIREFRINGENCE-LIKE 27 | ALTERED XYLOGLUCAN 4, TRICHOME BIREFRINGENCE-LIKE 27 |
-0.54 | 0.3 | -0.3 | ||
44 | AT1G80860 | phospholipid N-methyltransferase | ARABIDOPSIS PHOSPHOLIPID N-METHYLTRANSFERASE, phospholipid N-methyltransferase |
-0.54 | 0.29 | -0.32 | ||
45 | AT2G46040 | ARID/BRIGHT DNA-binding domain;ELM2 domain protein | -0.54 | 0.31 | -0.32 | |||
46 | AT4G36560 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.29 | -0.32 | |||
47 | AT3G46020 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.54 | 0.33 | -0.31 | |||
48 | AT5G55050 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.54 | 0.34 | -0.3 | |||
49 | AT1G24030 | Protein kinase superfamily protein | 0.54 | 0.3 | -0.34 | |||
50 | AT5G37870 | Protein with RING/U-box and TRAF-like domains | 0.53 | 0.32 | -0.32 | |||
51 | AT3G60920 | CONTAINS InterPro DOMAIN/s: Beige/BEACH (InterPro:IPR000409); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.1); Has 1795 Blast hits to 1563 proteins in 214 species: Archae - 2; Bacteria - 29; Metazoa - 830; Fungi - 160; Plants - 230; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink). |
0.53 | 0.35 | -0.31 | |||
52 | AT3G29220 | transposable element gene | 0.53 | 0.31 | -0.31 | |||
53 | AT5G40260 | Nodulin MtN3 family protein | AtSWEET8, SWEET8 | 0.53 | 0.31 | -0.31 | ||
54 | AT1G48660 | Auxin-responsive GH3 family protein | -0.53 | 0.35 | -0.31 | |||
55 | AT1G70470 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23530.1); Has 64 Blast hits to 64 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 10; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.53 | 0.32 | -0.32 | |||
56 | AT4G11745 | Galactose oxidase/kelch repeat superfamily protein | 0.53 | 0.31 | -0.31 | |||
57 | AT5G53560 | cytochrome B5 isoform E | ATB5-A, ARABIDOPSIS CYTOCHROME B5 ISOFORM E, B5 #2, cytochrome B5 isoform E |
-0.53 | 0.33 | -0.31 | ||
58 | AT1G75870 | unknown protein; Has 10 Blast hits to 10 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.32 | -0.31 | |||
59 | AT1G08860 | Calcium-dependent phospholipid-binding Copine family protein |
BONZAI 3 | 0.52 | 0.32 | -0.32 | ||
60 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
0.52 | 0.31 | -0.34 | ||
61 | AT5G60630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.52 | 0.34 | -0.29 | |||
62 | AT3G63340 | Protein phosphatase 2C family protein | 0.52 | 0.3 | -0.35 | |||
63 | AT5G30440 | transposable element gene | 0.52 | 0.29 | -0.31 | |||
64 | AT4G05510 | transposable element gene | 0.52 | 0.32 | -0.31 | |||
65 | AT2G17270 | phosphate transporter 3;3 | phosphate transporter 3;3 | 0.52 | 0.31 | -0.33 | ||
66 | AT5G58830 | Subtilisin-like serine endopeptidase family protein | 0.52 | 0.3 | -0.3 | |||
67 | AT2G40240 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.51 | 0.31 | -0.32 | |||
68 | AT5G14960 | DP-E2F-like 2 | DP-E2F-like 2, E2FD, E2L1 | 0.51 | 0.32 | -0.3 | ||
69 | AT2G33870 | RAB GTPase homolog A1H | RAB GTPase homolog A1H | 0.51 | 0.29 | -0.3 | ||
70 | AT5G60220 | tetraspanin4 | tetraspanin4 | 0.51 | 0.31 | -0.32 | ||
71 | AT2G26720 | Cupredoxin superfamily protein | -0.51 | 0.32 | -0.32 | |||
72 | AT2G15800 | transposable element gene | -0.51 | 0.33 | -0.33 | |||
73 | AT2G32890 | RALF-like 17 | RALF-like 17 | 0.51 | 0.31 | -0.29 | ||
74 | AT4G37340 | cytochrome P450, family 81, subfamily D, polypeptide 3 | cytochrome P450, family 81, subfamily D, polypeptide 3 |
0.51 | 0.33 | -0.31 | ||
75 | AT3G25170 | ralf-like 26 | ralf-like 26 | 0.51 | 0.31 | -0.32 | ||
76 | AT3G28610 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.51 | 0.31 | -0.31 | |||
77 | AT3G57620 | glyoxal oxidase-related protein | -0.51 | 0.31 | -0.31 | |||
78 | AT2G35110 | transcription activators | GNARLED, NCK-ASSOCIATED PROTEIN 1, NAPP |
0.51 | 0.31 | -0.32 | ||
79 | AT5G53680 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.5 | 0.3 | -0.33 | |||
80 | AT3G04100 | AGAMOUS-like 57 | AGAMOUS-like 57 | -0.5 | 0.33 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
81 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.72 | 0.43 | -0.46 | ||
82 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
0.67 | 0.34 | -0.31 | ||
83 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
0.64 | 0.31 | -0.33 | ||
84 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.64 | 0.32 | -0.3 | ||
85 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | 0.64 | 0.3 | -0.32 | ||
86 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
0.62 | 0.32 | -0.32 | ||
87 | C0005 | β-Fructose-6-phosphate | β-D-Fructose-6-phosphate | D-Fructose-6-phosphate | starch biosynthesis, Rubisco shunt, Calvin-Benson-Bassham cycle, mannitol degradation II, ascorbate biosynthesis I (L-galactose pathway), UDP-N-acetyl-D-glucosamine biosynthesis II, GDP-mannose biosynthesis, mannose degradation, sucrose biosynthesis I, sucrose degradation III, glycolysis IV (plant cytosol), pentose phosphate pathway (non-oxidative branch), glycolysis I, superpathway of sucrose and starch metabolism II (photosynthetic tissue), D-mannose degradation, gluconeogenesis I |
0.58 | 0.31 | -0.32 | ||
88 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
0.53 | 0.3 | -0.34 |