AT1G76880 : -
Query Information
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AGICode AT1G76880
Description Duplicated homeodomain-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G76880 Duplicated homeodomain-like superfamily protein 1 0.33 -0.31
2 AT1G26820 ribonuclease 3 ribonuclease 3 -0.71 0.31 -0.32
3 AT2G18820 transposable element gene 0.69 0.32 -0.32
4 AT4G17220 microtubule-associated proteins 70-5 microtubule-associated proteins
70-5, microtubule-associated
proteins 70-5		 -0.68 0.3 -0.34
5 AT1G01220 L-fucokinase/GDP-L-fucose pyrophosphorylase Arabidopsis thaliana
L-fucokinase/GDP-L-fucose
pyrophosphorylase,
L-fucokinase/GDP-L-fucose
pyrophosphorylase		 0.67 0.32 -0.32
6 AT2G16400 BEL1-like homeodomain 7 BEL1-like homeodomain 7 0.67 0.31 -0.31
7 AT1G69820 gamma-glutamyl transpeptidase 3 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.65 0.32 -0.33
8 AT5G42670 Agenet domain-containing protein 0.65 0.32 -0.31
9 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.65 0.32 -0.32
10 AT1G26590 C2H2-like zinc finger protein 0.65 0.3 -0.31
11 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.65 0.31 -0.34
12 AT1G61930 Protein of unknown function, DUF584 0.64 0.32 -0.34
13 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.64 0.32 -0.31
14 ATCG00040 maturase K maturase K 0.64 0.31 -0.32
15 AT5G64050 glutamate tRNA synthetase ATERS, glutamate tRNA synthetase,
OVULE ABORTION 3		 0.63 0.32 -0.29
16 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.31 -0.32
17 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 0.63 0.31 -0.33
18 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 0.63 0.33 -0.33
19 AT1G21290 transposable element gene 0.63 0.31 -0.31
20 AT5G23220 nicotinamidase 3 nicotinamidase 3 -0.63 0.3 -0.33
21 AT1G80970 XH domain-containing protein -0.63 0.3 -0.33
22 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.63 0.31 -0.31
23 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.62 0.29 -0.31
24 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 0.62 0.29 -0.3
25 AT2G32050 Family of unknown function (DUF572) 0.62 0.31 -0.29
26 AT1G13400 C2H2 and C2HC zinc fingers superfamily protein JAGGED-LIKE, NUBBIN 0.61 0.31 -0.3
27 AT3G42820 transposable element gene 0.6 0.31 -0.32
28 AT1G07270 Cell division control, Cdc6 0.59 0.31 -0.31
29 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 0.59 0.32 -0.34
30 AT1G26870 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 9, FEZ		 -0.59 0.33 -0.33
31 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.59 0.33 -0.31
32 AT1G63670 Protein of unknown function (DUF3741) 0.58 0.31 -0.31
33 AT2G34880 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 maternal effect embryo arrest 27,
PKDM7C		 0.58 0.31 -0.3
34 AT2G39910 ARM repeat superfamily protein 0.58 0.33 -0.29
35 AT3G25960 Pyruvate kinase family protein 0.58 0.32 -0.31
36 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.34 -0.31
37 AT5G39430 Protein of unknown function (DUF1336) 0.58 0.3 -0.31
38 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.31 -0.34
39 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 0.58 0.32 -0.33
40 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 0.58 0.31 -0.31
41 AT1G49930 BEST Arabidopsis thaliana protein match is: Alanyl-tRNA
synthetase, class IIc (TAIR:AT5G22800.1); Has 21 Blast hits
to 21 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.58 0.31 -0.32
42 AT4G00700 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.58 0.33 -0.32
43 AT1G23420 Plant-specific transcription factor YABBY family protein INNER NO OUTER 0.58 0.32 -0.32
44 AT1G66470 ROOT HAIR DEFECTIVE6 AtRHD6, ROOT HAIR DEFECTIVE6 -0.57 0.32 -0.34
45 AT1G06260 Cysteine proteinases superfamily protein 0.57 0.3 -0.32
46 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.32
47 AT3G03090 vacuolar glucose transporter 1 vacuolar glucose transporter 1,
vacuolar glucose transporter 1		 0.57 0.33 -0.33
48 AT5G40020 Pathogenesis-related thaumatin superfamily protein -0.56 0.32 -0.3
49 AT1G75400 RING/U-box superfamily protein -0.56 0.29 -0.29
50 AT5G42250 Zinc-binding alcohol dehydrogenase family protein -0.56 0.33 -0.31
51 AT3G12140 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML1, EMSY-like 1 0.56 0.35 -0.35
52 AT3G32180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits
to 25 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.32 -0.3
53 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.56 0.32 -0.33
54 AT1G61400 S-locus lectin protein kinase family protein 0.56 0.32 -0.31
55 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.56 0.33 -0.34
56 AT4G03950 Nucleotide/sugar transporter family protein 0.56 0.31 -0.32
57 AT5G06250 AP2/B3-like transcriptional factor family protein 0.56 0.31 -0.33
58 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.56 0.31 -0.3
59 AT4G07425 transposable element gene 0.56 0.31 -0.31
60 AT2G41570 transposable element gene -0.56 0.3 -0.31
61 AT2G05810 ARM repeat superfamily protein 0.55 0.33 -0.35
62 AT4G00110 UDP-D-glucuronate 4-epimerase 3 UDP-D-glucuronate 4-epimerase 3 -0.55 0.3 -0.31
63 AT3G56740 Ubiquitin-associated (UBA) protein -0.55 0.32 -0.3
64 ATCG00660 ribosomal protein L20 ribosomal protein L20 0.55 0.28 -0.34
65 AT2G42660 Homeodomain-like superfamily protein -0.55 0.34 -0.29
66 AT1G34440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G05095.1); Has 28 Blast hits
to 28 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.32 -0.29
67 AT5G20170 RNA polymerase II transcription mediators 0.55 0.31 -0.3
68 AT1G08130 DNA ligase 1 DNA ligase 1, DNA ligase 1 0.55 0.34 -0.31
69 AT1G04790 RING/U-box superfamily protein 0.55 0.33 -0.32
70 AT1G40230 transposable element gene 0.55 0.32 -0.31
71 AT5G62260 AT hook motif DNA-binding family protein -0.54 0.31 -0.32
72 AT4G08590 ORTHRUS-like ORTH-LIKE 1, ORTHRUS-LIKE 1,
ORTHRUS-like, VARIANT IN
METHYLATION 6		 -0.54 0.31 -0.32
73 AT5G51740 Peptidase family M48 family protein -0.53 0.33 -0.32
74 AT2G37120 S1FA-like DNA-binding protein -0.53 0.33 -0.33
75 AT3G54130 Josephin family protein -0.53 0.3 -0.3
76 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.53 0.32 -0.32
77 AT5G09340 Ubiquitin family protein -0.52 0.31 -0.31
78 AT1G31050 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.52 0.29 -0.3
79 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 -0.52 0.3 -0.32
80 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 -0.51 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.77 0.42 -0.43
82 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis 0.7 0.42 -0.46 C0193
83 C0124 Isonicotinic acid - - - 0.7 0.44 -0.42
84 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.66 0.46 -0.44 C0262
85 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.65 0.46 -0.42 C0088
86 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis -0.64 0.4 -0.45
87 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.61 0.45 -0.45 C0091
88 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.6 0.46 -0.41 C0186
89 C0104 Glutathione - Glutathione glucosinolate biosynthesis from tryptophan,
glutathione redox reactions I,
glutathione degradation,
gamma-glutamyl cycle (plant pathway),
indole glucosinolate breakdown (active in intact plant cell),
selenate reduction,
glutathione redox reactions II,
glucosinolate biosynthesis from trihomomethionine,
ascorbate glutathione cycle,
glucosinolate biosynthesis from pentahomomethionine,
camalexin biosynthesis,
glucosinolate biosynthesis from homomethionine,
glucosinolate biosynthesis from phenylalanine,
methylglyoxal degradation I,
sulfate reduction II (assimilatory),
glucosinolate biosynthesis from dihomomethionine,
indole glucosinolate breakdown (insect chewing induced),
glutathione biosynthesis,
formaldehyde oxidation II (glutathione-dependent),
glutathione-mediated detoxification II,
glucosinolate biosynthesis from tetrahomomethionine,
glucosinolate biosynthesis from hexahomomethionine,
gamma-glutamyl cycle 		-0.52 0.34 -0.32 C0104