AGICode | AT3G25600 |
Description | Calcium-binding EF-hand family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G25600 | Calcium-binding EF-hand family protein | 1 | 0.29 | -0.34 | |||
2 | AT5G47230 | ethylene responsive element binding factor 5 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, ethylene responsive element binding factor 5 |
0.83 | 0.32 | -0.3 | ||
3 | AT3G16720 | TOXICOS EN LEVADURA 2 | TOXICOS EN LEVADURA 2, TOXICOS EN LEVADURA 2 |
0.82 | 0.31 | -0.32 | ||
4 | AT3G10930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.32 | -0.31 | |||
5 | AT4G17490 | ethylene responsive element binding factor 6 | ethylene responsive element binding factor 6, ERF-6-6, ethylene responsive element binding factor 6 |
0.77 | 0.32 | -0.31 | ||
6 | AT3G46600 | GRAS family transcription factor | 0.77 | 0.33 | -0.32 | |||
7 | AT1G23710 | Protein of unknown function (DUF1645) | 0.76 | 0.29 | -0.3 | |||
8 | AT2G40140 | zinc finger (CCCH-type) family protein | ATSZF2, CZF1, (SALT-INDUCIBLE ZINC FINGER 2, ZFAR1 |
0.75 | 0.31 | -0.3 | ||
9 | AT3G02840 | ARM repeat superfamily protein | 0.75 | 0.31 | -0.31 | |||
10 | AT2G39650 | Protein of unknown function (DUF506) | 0.73 | 0.3 | -0.32 | |||
11 | AT2G26190 | calmodulin-binding family protein | 0.73 | 0.31 | -0.32 | |||
12 | AT2G22880 | VQ motif-containing protein | 0.73 | 0.33 | -0.29 | |||
13 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
0.72 | 0.31 | -0.32 | ||
14 | AT5G37770 | EF hand calcium-binding protein family | CALMODULIN-LIKE 24, TOUCH 2 | 0.71 | 0.3 | -0.31 | ||
15 | AT3G11820 | syntaxin of plants 121 | AT-SYR1, ATSYP121, SYNTAXIN RELATED PROTEIN 1, PENETRATION1, syntaxin of plants 121, SYNTAXIN RELATED PROTEIN 1 |
0.71 | 0.32 | -0.31 | ||
16 | AT1G27100 | Actin cross-linking protein | 0.71 | 0.32 | -0.3 | |||
17 | AT4G24570 | dicarboxylate carrier 2 | dicarboxylate carrier 2 | 0.71 | 0.32 | -0.31 | ||
18 | AT4G01250 | WRKY family transcription factor | AtWRKY22, WRKY22 | 0.7 | 0.34 | -0.31 | ||
19 | AT1G28370 | ERF domain protein 11 | ERF DOMAIN PROTEIN 11, ERF domain protein 11 |
0.7 | 0.32 | -0.32 | ||
20 | AT3G15530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.7 | 0.3 | -0.31 | |||
21 | AT2G46400 | WRKY DNA-binding protein 46 | WRKY DNA-BINDING PROTEIN 46, WRKY DNA-binding protein 46 |
0.69 | 0.32 | -0.32 | ||
22 | AT1G59590 | ZCF37 | ZCF37 | 0.69 | 0.31 | -0.3 | ||
23 | AT3G23250 | myb domain protein 15 | MYB DOMAIN PROTEIN 15, ATY19, myb domain protein 15 |
0.68 | 0.31 | -0.32 | ||
24 | AT4G29780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
0.68 | 0.33 | -0.31 | |||
25 | AT3G59080 | Eukaryotic aspartyl protease family protein | 0.67 | 0.31 | -0.32 | |||
26 | AT1G18740 | Protein of unknown function (DUF793) | 0.67 | 0.33 | -0.33 | |||
27 | AT2G24600 | Ankyrin repeat family protein | 0.66 | 0.32 | -0.32 | |||
28 | AT5G46710 | PLATZ transcription factor family protein | 0.66 | 0.3 | -0.29 | |||
29 | AT1G19770 | purine permease 14 | purine permease 14, purine permease 14 |
0.65 | 0.32 | -0.31 | ||
30 | AT2G41100 | Calcium-binding EF hand family protein | ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TOUCH 3 |
0.64 | 0.31 | -0.33 | ||
31 | AT1G63750 | Disease resistance protein (TIR-NBS-LRR class) family | 0.64 | 0.33 | -0.31 | |||
32 | AT1G49840 | Protein of unknown function (DUF620) | 0.64 | 0.31 | -0.32 | |||
33 | AT5G39670 | Calcium-binding EF-hand family protein | 0.63 | 0.29 | -0.31 | |||
34 | AT5G51190 | Integrase-type DNA-binding superfamily protein | 0.63 | 0.29 | -0.32 | |||
35 | AT1G35210 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.63 | 0.31 | -0.32 | |||
36 | AT5G54490 | pinoid-binding protein 1 | pinoid-binding protein 1 | 0.63 | 0.31 | -0.31 | ||
37 | AT5G45340 | cytochrome P450, family 707, subfamily A, polypeptide 3 | cytochrome P450, family 707, subfamily A, polypeptide 3 |
0.63 | 0.31 | -0.3 | ||
38 | AT4G23810 | WRKY family transcription factor | ATWRKY53, WRKY53 | 0.62 | 0.31 | -0.3 | ||
39 | AT5G26920 | Cam-binding protein 60-like G | Cam-binding protein 60-like G | 0.62 | 0.31 | -0.29 | ||
40 | AT5G59450 | GRAS family transcription factor | 0.62 | 0.3 | -0.32 | |||
41 | AT5G23130 | Peptidoglycan-binding LysM domain-containing protein | 0.62 | 0.31 | -0.33 | |||
42 | AT1G14740 | Protein of unknown function (DUF1423) | 0.61 | 0.29 | -0.31 | |||
43 | AT4G30430 | tetraspanin9 | tetraspanin9 | 0.61 | 0.33 | -0.31 | ||
44 | AT5G10750 | Protein of unknown function (DUF1336) | 0.6 | 0.33 | -0.3 | |||
45 | AT4G04970 | glucan synthase-like 1 | GLUCAN SYNTHASE LIKE 1, GLUCAN SYNTHASE LIKE-1, GSL01, glucan synthase-like 1 |
-0.6 | 0.32 | -0.32 | ||
46 | AT4G32030 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.6 | 0.34 | -0.3 | |||
47 | AT4G38940 | Galactose oxidase/kelch repeat superfamily protein | 0.6 | 0.32 | -0.33 | |||
48 | AT1G12610 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 1 | 0.6 | 0.33 | -0.33 | ||
49 | AT5G61600 | ethylene response factor 104 | ethylene response factor 104 | 0.6 | 0.32 | -0.31 | ||
50 | AT5G58120 | Disease resistance protein (TIR-NBS-LRR class) family | 0.6 | 0.3 | -0.31 | |||
51 | AT3G32260 | Nucleic acid-binding proteins superfamily | 0.59 | 0.3 | -0.32 | |||
52 | AT5G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.59 | 0.31 | -0.32 | |||
53 | AT1G73540 | nudix hydrolase homolog 21 | nudix hydrolase homolog 21, nudix hydrolase homolog 21 |
0.59 | 0.31 | -0.31 | ||
54 | AT1G58420 | Uncharacterised conserved protein UCP031279 | 0.59 | 0.31 | -0.33 | |||
55 | AT1G22190 | Integrase-type DNA-binding superfamily protein | related to AP2 4 | 0.59 | 0.31 | -0.31 | ||
56 | AT1G27770 | autoinhibited Ca2+-ATPase 1 | autoinhibited Ca2+-ATPase 1, PLASTID ENVELOPE ATPASE 1 |
0.58 | 0.3 | -0.31 | ||
57 | AT3G50060 | myb domain protein 77 | myb domain protein 77 | 0.58 | 0.29 | -0.29 | ||
58 | AT5G57220 | cytochrome P450, family 81, subfamily F, polypeptide 2 | cytochrome P450, family 81, subfamily F, polypeptide 2 |
0.58 | 0.32 | -0.32 | ||
59 | AT3G56270 | Plant protein of unknown function (DUF827) | -0.57 | 0.31 | -0.31 | |||
60 | AT3G13772 | transmembrane nine 7 | AtTMN7, transmembrane nine 7 | -0.57 | 0.32 | -0.33 | ||
61 | AT1G68720 | tRNA arginine adenosine deaminase | ARABIDOPSIS THALIANA TRNA ADENOSINE DEAMINASE A, tRNA arginine adenosine deaminase |
-0.56 | 0.31 | -0.33 | ||
62 | AT1G21660 | Chaperone DnaJ-domain superfamily protein | -0.56 | 0.3 | -0.33 | |||
63 | AT1G32670 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.31 | -0.31 | |||
64 | AT5G03920 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.53 | 0.33 | -0.32 | |||
65 | AT3G31380 | transposable element gene | -0.52 | 0.31 | -0.3 | |||
66 | AT2G16960 | ARM repeat superfamily protein | -0.5 | 0.32 | -0.31 | |||
67 | AT5G15910 | NAD(P)-binding Rossmann-fold superfamily protein | -0.5 | 0.31 | -0.31 | |||
68 | AT2G29580 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5B | -0.5 | 0.32 | -0.29 | ||
69 | AT2G47830 | Cation efflux family protein | -0.49 | 0.31 | -0.33 | |||
70 | AT2G24220 | purine permease 5 | purine permease 5, purine permease 5 |
-0.48 | 0.31 | -0.33 | ||
71 | AT1G23530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70470.1); Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.48 | 0.33 | -0.31 | |||
72 | AT4G03880 | transposable element gene | -0.46 | 0.32 | -0.32 | |||
73 | AT5G56110 | myb domain protein 103 | myb domain protein 103, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 80, MALE STERILE 188, myb domain protein 103, MYB80 |
-0.46 | 0.34 | -0.31 | ||
74 | AT2G04660 | anaphase-promoting complex/cyclosome 2 | anaphase-promoting complex/cyclosome 2 |
-0.46 | 0.33 | -0.31 | ||
75 | AT3G13228 | RING/U-box superfamily protein | -0.44 | 0.3 | -0.31 | |||
76 | AT3G03830 | SAUR-like auxin-responsive protein family | -0.44 | 0.32 | -0.29 | |||
77 | AT4G01910 | Cysteine/Histidine-rich C1 domain family protein | -0.43 | 0.31 | -0.32 | |||
78 | AT1G06020 | pfkB-like carbohydrate kinase family protein | -0.43 | 0.3 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
79 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | -0.82 | 0.42 | -0.45 | ||
80 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.79 | 0.43 | -0.44 | ||
81 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.76 | 0.46 | -0.44 | ||
82 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.74 | 0.46 | -0.45 | ||
83 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.72 | 0.45 | -0.44 | ||
84 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
-0.72 | 0.46 | -0.46 | ||
85 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
-0.71 | 0.47 | -0.45 | ||
86 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
-0.69 | 0.46 | -0.46 | ||
87 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.67 | 0.41 | -0.44 | ||
88 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.67 | 0.46 | -0.45 | ||
89 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
-0.67 | 0.44 | -0.46 | ||
90 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.65 | 0.47 | -0.42 | ||
91 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | -0.65 | 0.42 | -0.45 | ||
92 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
-0.6 | 0.41 | -0.44 | ||
93 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
-0.59 | 0.45 | -0.41 | ||
94 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.59 | 0.46 | -0.46 | ||
95 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.59 | 0.41 | -0.45 | ||
96 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
-0.53 | 0.3 | -0.33 | ||
97 | C0062 | Betain | - | - | - | -0.47 | 0.32 | -0.29 |