AT3G08910 : -
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AGICode AT3G08910
Description DNAJ heat shock family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G08910 DNAJ heat shock family protein 1 0.32 -0.32
2 AT3G47980 Integral membrane HPP family protein 0.76 0.3 -0.31
3 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B
0.74 0.32 -0.31
4 AT1G71900 Protein of unknown function (DUF803) 0.73 0.33 -0.32
5 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 0.72 0.33 -0.3
6 AT5G01460 LMBR1-like membrane protein 0.72 0.32 -0.33
7 AT3G46030 Histone superfamily protein HTB11 0.71 0.34 -0.31
8 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
0.71 0.32 -0.32
9 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1
0.7 0.33 -0.31
10 AT1G36510 Nucleic acid-binding proteins superfamily -0.7 0.32 -0.34
11 AT2G41350 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits
to 188 proteins in 66 species: Archae - 0; Bacteria - 12;
Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).
AtAUG1, augmin 1, EMBRYO DEFECTIVE
2819
0.7 0.33 -0.32
12 AT3G53650 Histone superfamily protein 0.69 0.34 -0.31
13 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.69 0.3 -0.31
14 AT1G62820 Calcium-binding EF-hand family protein 0.69 0.33 -0.29
15 AT1G69360 Plant protein of unknown function (DUF863) -0.69 0.32 -0.33
16 AT4G17190 farnesyl diphosphate synthase 2 farnesyl diphosphate synthase 2 0.69 0.31 -0.33
17 AT5G11010 Pre-mRNA cleavage complex II protein family 0.69 0.3 -0.32
18 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4
0.68 0.31 -0.31
19 AT1G43570 transposable element gene -0.68 0.33 -0.31
20 AT4G04150 transposable element gene -0.68 0.32 -0.31
21 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2
0.68 0.29 -0.31
22 AT3G07274 unknown pseudogene -0.68 0.3 -0.31
23 AT1G02360 Chitinase family protein 0.68 0.33 -0.3
24 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein
DEI1, PASTICCINO 1 -0.68 0.31 -0.31
25 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 0.67 0.34 -0.33
26 ATMG00400 hypothetical protein ORF157 -0.67 0.35 -0.3
27 AT5G49945 Protein of unknown function (DUF1682) 0.67 0.31 -0.33
28 AT2G19660 Cysteine/Histidine-rich C1 domain family protein 0.67 0.32 -0.32
29 AT1G02310 Glycosyl hydrolase superfamily protein endo-beta-mannanase 1 -0.67 0.31 -0.32
30 AT4G18990 xyloglucan endotransglucosylase/hydrolase 29 xyloglucan
endotransglucosylase/hydrolase 29
-0.67 0.3 -0.27
31 AT2G23110 Late embryogenesis abundant protein, group 6 -0.67 0.31 -0.32
32 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein
0.66 0.32 -0.31
33 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.66 0.31 -0.32
34 AT1G77350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function KRTCAP2
(InterPro:IPR018614); Has 141 Blast hits to 141 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi -
0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).
0.66 0.33 -0.32
35 AT2G38905 Low temperature and salt responsive protein family -0.66 0.33 -0.3
36 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.66 0.31 -0.3
37 AT5G66960 Prolyl oligopeptidase family protein -0.66 0.3 -0.31
38 AT1G28160 Integrase-type DNA-binding superfamily protein 0.66 0.31 -0.31
39 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).
-0.66 0.32 -0.31
40 AT1G30540 Actin-like ATPase superfamily protein 0.65 0.32 -0.32
41 AT5G43360 phosphate transporter 1;3 ATPT4, phosphate transporter 1;3,
PHOSPHATE TRANSPORTER 3
0.65 0.34 -0.31
42 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I
-0.65 0.33 -0.32
43 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.65 0.32 -0.31
44 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.64 0.3 -0.29
45 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30
0.64 0.31 -0.32
46 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17
-0.64 0.3 -0.33
47 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein
-0.64 0.33 -0.31
48 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain
SABRE -0.64 0.33 -0.31
49 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.64 0.32 -0.32
50 AT3G24790 Protein kinase superfamily protein -0.64 0.32 -0.31
51 AT5G06430 Thioredoxin superfamily protein 0.64 0.33 -0.35
52 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0.64 0.28 -0.32
53 AT5G59030 copper transporter 1 copper transporter 1 0.63 0.33 -0.31
54 AT5G55950 Nucleotide/sugar transporter family protein -0.63 0.31 -0.32
55 AT3G32060 transposable element gene 0.63 0.31 -0.31
56 AT1G43970 unknown protein; Has 10 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.63 0.32 -0.28
57 AT1G10720 BSD domain-containing protein 0.63 0.33 -0.31
58 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein
Arabidopsis thaliana C2 domain, C2
domain
-0.62 0.33 -0.32
59 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 0.62 0.31 -0.32
60 AT5G05610 alfin-like 1 alfin-like 1 0.62 0.31 -0.32
61 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain 0.62 0.33 -0.33
62 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.62 0.32 -0.32
63 AT1G78770 anaphase promoting complex 6 anaphase promoting complex 6 0.62 0.29 -0.32
64 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.62 0.29 -0.33
65 AT4G34215 Domain of unknown function (DUF303) 0.62 0.29 -0.3
66 AT2G32690 glycine-rich protein 23 GLYCINE-RICH PROTEIN 23,
glycine-rich protein 23
0.62 0.3 -0.33
67 AT2G36410 Family of unknown function (DUF662) 0.62 0.3 -0.31
68 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).
0.62 0.33 -0.31
69 AT3G17290 transposable element gene -0.61 0.3 -0.3
70 AT5G55010 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).
-0.61 0.33 -0.3
71 AT3G42700 transposable element gene -0.61 0.32 -0.31
72 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6
0.61 0.36 -0.33
73 AT3G08630 Protein of unknown function (DUF3411) 0.61 0.3 -0.3
74 AT5G56790 Protein kinase superfamily protein -0.61 0.3 -0.32
75 AT5G59460 scarecrow-like transcription factor 11 (SCL11) 0.61 0.31 -0.3
76 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta
-0.61 0.31 -0.32
77 AT4G16430 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
0.61 0.32 -0.33
78 AT3G07990 serine carboxypeptidase-like 27 serine carboxypeptidase-like 27 0.61 0.31 -0.33
79 AT1G22870 Protein kinase family protein with ARM repeat domain -0.6 0.31 -0.32
80 AT5G11050 myb domain protein 64 myb domain protein 64, myb domain
protein 64
-0.6 0.32 -0.32
81 AT5G13380 Auxin-responsive GH3 family protein -0.6 0.3 -0.31
82 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C
-0.6 0.32 -0.35
83 AT2G21490 dehydrin LEA dehydrin LEA -0.6 0.32 -0.34
84 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5
-0.6 0.31 -0.31
85 AT5G50910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).
-0.6 0.29 -0.31
86 AT5G51690 1-amino-cyclopropane-1-carboxylate synthase 12 1-amino-cyclopropane-1-carboxylate
synthase 12
-0.6 0.3 -0.34
87 AT1G05790 lipase class 3 family protein -0.6 0.32 -0.31
88 AT1G48130 1-cysteine peroxiredoxin 1 1-cysteine peroxiredoxin 1,
1-cysteine peroxiredoxin 1
-0.59 0.32 -0.31
89 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.59 0.32 -0.31
90 AT5G52400 cytochrome P450, family 715, subfamily A, polypeptide 1 cytochrome P450, family 715,
subfamily A, polypeptide 1
-0.59 0.3 -0.31
91 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).
-0.59 0.3 -0.33
92 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18
-0.59 0.3 -0.31
93 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein -0.58 0.32 -0.33
94 AT2G20460 transposable element gene -0.58 0.31 -0.31
95 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).
-0.58 0.32 -0.32
96 AT2G01130 DEA(D/H)-box RNA helicase family protein -0.58 0.31 -0.32
97 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).
-0.58 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging
-0.83 0.45 -0.43 C0056
99 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.8 0.43 -0.45 C0099
100 C0057 Anthranilic acid - Anthranilate tryptophan biosynthesis,
benzoylanthranilate biosynthesis
-0.77 0.47 -0.44 C0057
101 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.75 0.46 -0.43
102 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol)
-0.72 0.43 -0.42 C0032
103 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.67 0.45 -0.45 C0234
104 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis
-0.63 0.46 -0.5 C0011
105 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis
-0.61 0.4 -0.44 C0073
106 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II
-0.6 0.41 -0.44 C0186
107 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis
-0.58 0.45 -0.45 C0015