AT1G60995 : -
Query Information
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AGICode AT1G60995
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G60995 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s:
Membralin (InterPro:IPR019144); Has 172 Blast hits to 170
proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa -
110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes
- 24 (source: NCBI BLink).		 1 0.32 -0.32
2 AT2G34840 Coatomer epsilon subunit -0.68 0.3 -0.31
3 AT2G15042 Leucine-rich repeat (LRR) family protein -0.66 0.28 -0.31
4 AT2G27610 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.33 -0.32
5 AT2G04070 MATE efflux family protein 0.65 0.29 -0.33
6 AT2G33690 Late embryogenesis abundant protein, group 6 0.64 0.33 -0.31
7 AT4G36880 cysteine proteinase1 cysteine proteinase1 0.64 0.31 -0.31
8 AT1G15330 Cystathionine beta-synthase (CBS) protein -0.64 0.3 -0.31
9 AT3G56270 Plant protein of unknown function (DUF827) -0.63 0.29 -0.31
10 AT4G37050 PATATIN-like protein 4 phospholipase A IVC, PLA V,
patatin-related phospholipase III
beta, PATATIN-like protein 4		 -0.62 0.33 -0.31
11 AT3G52260 Pseudouridine synthase family protein -0.61 0.32 -0.31
12 AT2G22990 sinapoylglucose 1 SERINE CARBOXYPEPTIDASE-LIKE 8,
sinapoylglucose 1		 -0.6 0.32 -0.3
13 AT5G32590 myosin heavy chain-related -0.6 0.31 -0.31
14 AT5G14510 ARM repeat superfamily protein -0.6 0.3 -0.33
15 AT2G32400 glutamate receptor 5 ATGLR3.7, GLUTAMATE RECEPTOR 3.7,
glutamate receptor 5		 0.6 0.3 -0.33
16 AT5G14770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.31 -0.32
17 AT3G22490 Seed maturation protein -0.59 0.3 -0.33
18 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.58 0.3 -0.33
19 AT3G06433 pseudogene of nodulin MtN3 family protein -0.57 0.31 -0.32
20 AT5G42320 Zn-dependent exopeptidases superfamily protein 0.56 0.32 -0.33
21 AT1G50140 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.56 0.29 -0.32
22 AT5G34790 transposable element gene 0.56 0.31 -0.32
23 AT4G10030 alpha/beta-Hydrolases superfamily protein -0.56 0.31 -0.3
24 AT5G25950 Protein of Unknown Function (DUF239) 0.55 0.31 -0.33
25 AT5G67020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.55 0.3 -0.3
26 AT3G15280 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: L mature pollen stage, 4
anthesis, petal differentiation and expansion stage; Has 36
Blast hits to 36 proteins in 15 species: Archae - 0;
Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.32 -0.31
27 AT2G04840 Protein of unknown function (DUF295) 0.54 0.3 -0.32
28 AT3G18660 plant glycogenin-like starch initiation protein 1 glucuronic acid substitution of
xylan 1, plant glycogenin-like
starch initiation protein 1		 -0.54 0.29 -0.33
29 AT1G70080 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.53 0.32 -0.29
30 AT4G19500 nucleoside-triphosphatases;transmembrane
receptors;nucleotide binding;ATP binding		 -0.53 0.29 -0.32
31 AT4G02780 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 ABC33, ARABIDOPSIS THALIANA
ENT-COPALYL DIPHOSPHATE SYNTHETASE
1, CPP synthase, ENT-COPALYL
DIPHOSPHATE SYNTHETASE 1, GA
REQUIRING 1		 -0.53 0.31 -0.32
32 AT1G16980 trehalose-phosphatase/synthase 2 trehalose-phosphatase/synthase 2,
TREHALOSE -6-PHOSPHATASE SYNTHASE
S2, trehalose-phosphatase/synthase
2		 -0.52 0.31 -0.31
33 AT3G27660 oleosin 4 OLEOSIN 3, oleosin 4 -0.52 0.32 -0.31
34 AT4G39180 Sec14p-like phosphatidylinositol transfer family protein ARABIDOPSIS THALIANA SECRETION 14,
SECRETION 14		 -0.52 0.31 -0.31
35 ATMG00140 hypothetical protein ORF167 -0.52 0.33 -0.34
36 AT3G01700 arabinogalactan protein 11 arabinogalactan protein 11,
ARABINOGALACTAN PROTEIN 11		 0.52 0.31 -0.33
37 AT3G43950 Protein kinase superfamily protein 0.52 0.32 -0.31
38 AT4G16640 Matrixin family protein -0.52 0.32 -0.31
39 AT5G59450 GRAS family transcription factor 0.52 0.32 -0.33
40 AT2G29580 CCCH-type zinc fingerfamily protein with RNA-binding domain MOS4-associated complex subunit 5B -0.52 0.31 -0.31
41 AT2G20430 ROP-interactive CRIB motif-containing protein 6 ROP-interactive CRIB
motif-containing protein 6		 0.52 0.3 -0.32
42 AT1G17800 early nodulin-like protein 22 AtENODL22, early nodulin-like
protein 22		 -0.51 0.33 -0.31
43 AT1G21850 SKU5 similar 8 SKU5 similar 8 -0.51 0.31 -0.31
44 AT1G54700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion;
CONTAINS InterPro DOMAIN/s: Serine endopeptidase DegP2
(InterPro:IPR015724); BEST Arabidopsis thaliana protein
match is: DegP protease 13 (TAIR:AT5G40560.1); Has 78 Blast
hits to 78 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.31 -0.32
45 AT1G52830 indole-3-acetic acid 6 indole-3-acetic acid 6, SHORT
HYPOCOTYL 1		 -0.51 0.31 -0.3
46 AT1G22080 Cysteine proteinases superfamily protein -0.51 0.33 -0.31
47 AT3G61450 syntaxin of plants 73 ATSYP73, syntaxin of plants 73 -0.5 0.3 -0.32
48 AT1G77240 AMP-dependent synthetase and ligase family protein -0.5 0.3 -0.31
49 AT4G18650 transcription factor-related -0.5 0.31 -0.33
50 AT1G34190 NAC domain containing protein 17 NAC domain containing protein 17,
NAC domain containing protein 17		 -0.5 0.31 -0.32
51 AT1G23670 Domain of unknown function (DUF220) -0.5 0.34 -0.34
52 AT5G50030 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.5 0.32 -0.32
53 AT1G34440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G05095.1); Has 28 Blast hits
to 28 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.5 0.32 -0.31
54 AT5G23790 galactinol synthase 5 galactinol synthase 5, galactinol
synthase 5		 0.49 0.31 -0.32
55 AT4G26040 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.49 0.31 -0.31
56 AT2G02360 phloem protein 2-B10 phloem protein 2-B10, phloem
protein 2-B10		 0.49 0.33 -0.33
57 AT3G02390 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast.		 0.48 0.33 -0.33
58 AT3G53790 TRF-like 4 TRF-like 4 0.47 0.32 -0.3
59 AT5G57950 26S proteasome regulatory subunit, putative 0.47 0.3 -0.3
60 AT1G04540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.47 0.3 -0.3
61 AT1G51480 Disease resistance protein (CC-NBS-LRR class) family 0.47 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.75 0.46 -0.46 C0056
63 C0094 Galactosamine D-Galactosamine - - -0.75 0.44 -0.41
64 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.74 0.44 -0.45 C0030
65 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.7 0.43 -0.44 C0234
66 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.68 0.45 -0.44 C0088
67 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.66 0.43 -0.45 C0186
68 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.66 0.43 -0.48 C0087
69 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.64 0.44 -0.45 C0011
70 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.64 0.46 -0.48 C0261
71 C0052 Adenosine - Adenosine adenine and adenosine salvage VI,
S-adenosyl-L-methionine cycle II,
cytokinins degradation,
methionine degradation I (to homocysteine),
adenine and adenosine salvage II 		-0.63 0.31 -0.31 C0052
72 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.61 0.44 -0.46 C0262
73 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		-0.61 0.31 -0.34 C0259
74 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.6 0.45 -0.44 C0015
75 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.6 0.43 -0.45 C0075
76 C0006 β-Homothreonine L-β-Homothreonine - - -0.6 0.45 -0.44
77 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		-0.57 0.31 -0.33 C0066
78 C0114 Homocystine L-Homocystine - - -0.53 0.31 -0.32
79 C0218 Pyridoxamine phosphate Pyridoxamine-5'-phosphate Pyridoxamine-5'-phosphate pyridoxal 5'-phosphate salvage pathway -0.51 0.33 -0.31 C0218
80 C0062 Betain - - - -0.5 0.31 -0.29