AGICode | AT1G68710 |
Description | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G68710 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
1 | 0.31 | -0.33 | |||
2 | AT2G34520 | mitochondrial ribosomal protein S14 | mitochondrial ribosomal protein S14 |
-0.73 | 0.29 | -0.33 | ||
3 | AT1G21430 | Flavin-binding monooxygenase family protein | YUC11 | 0.71 | 0.32 | -0.31 | ||
4 | AT5G03740 | histone deacetylase 2C | histone deacetylase 2C, HISTONE DEACETYLASE 3 |
-0.71 | 0.33 | -0.3 | ||
5 | AT3G02790 | zinc finger (C2H2 type) family protein | -0.71 | 0.32 | -0.3 | |||
6 | AT5G07890 | myosin heavy chain-related | 0.71 | 0.32 | -0.3 | |||
7 | AT5G16470 | zinc finger (C2H2 type) family protein | -0.69 | 0.31 | -0.34 | |||
8 | AT4G39675 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.69 | 0.32 | -0.31 | |||
9 | AT5G57290 | 60S acidic ribosomal protein family | -0.68 | 0.33 | -0.32 | |||
10 | AT5G23900 | Ribosomal protein L13e family protein | -0.68 | 0.32 | -0.29 | |||
11 | AT1G80140 | Pectin lyase-like superfamily protein | 0.68 | 0.32 | -0.32 | |||
12 | AT2G39500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.68 | 0.31 | -0.33 | |||
13 | AT4G31985 | Ribosomal protein L39 family protein | -0.67 | 0.31 | -0.31 | |||
14 | AT3G55730 | myb domain protein 109 | myb domain protein 109, myb domain protein 109 |
-0.67 | 0.32 | -0.34 | ||
15 | AT4G29390 | Ribosomal protein S30 family protein | -0.67 | 0.3 | -0.31 | |||
16 | AT1G77570 | Winged helix-turn-helix transcription repressor DNA-binding | -0.67 | 0.32 | -0.33 | |||
17 | AT3G54970 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
-0.67 | 0.31 | -0.32 | |||
18 | AT5G21130 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.67 | 0.34 | -0.35 | |||
19 | AT3G04920 | Ribosomal protein S24e family protein | -0.66 | 0.32 | -0.33 | |||
20 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
0.66 | 0.32 | -0.32 | |||
21 | AT4G26210 | Mitochondrial ATP synthase subunit G protein | -0.66 | 0.33 | -0.32 | |||
22 | AT4G32270 | Ubiquitin-like superfamily protein | 0.66 | 0.31 | -0.32 | |||
23 | AT4G24940 | SUMO-activating enzyme 1A | AT-SAE1-1, SUMO-ACTIVATING ENZYME 1A, SUMO-activating enzyme 1A |
-0.65 | 0.3 | -0.33 | ||
24 | AT5G10880 | tRNA synthetase-related / tRNA ligase-related | 0.65 | 0.3 | -0.3 | |||
25 | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | -0.64 | 0.32 | -0.32 | |||
26 | AT5G49210 | unknown protein; Has 3675 Blast hits to 2315 proteins in 312 species: Archae - 2; Bacteria - 342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes - 1742 (source: NCBI BLink). |
-0.64 | 0.33 | -0.34 | |||
27 | AT1G45160 | Protein kinase superfamily protein | 0.64 | 0.31 | -0.31 | |||
28 | AT5G02450 | Ribosomal protein L36e family protein | -0.64 | 0.3 | -0.31 | |||
29 | AT1G19240 | unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.33 | -0.31 | |||
30 | AT2G36160 | Ribosomal protein S11 family protein | -0.63 | 0.31 | -0.34 | |||
31 | AT3G05490 | ralf-like 22 | ralf-like 22 | -0.63 | 0.33 | -0.29 | ||
32 | AT4G31580 | serine/arginine-rich 22 | RS-containing zinc finger protein 22, RS-containing zinc finger protein 22, RS-CONTAINING ZINC FINGER PROTEIN 22, serine/arginine-rich 22, SRZ22 |
-0.63 | 0.32 | -0.32 | ||
33 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | -0.63 | 0.32 | -0.31 | |||
34 | AT2G07040 | Leucine-rich repeat protein kinase family protein | ATPRK2A, PRK2A | -0.63 | 0.3 | -0.32 | ||
35 | AT1G73720 | transducin family protein / WD-40 repeat family protein | SUPPRESSORS OF MEC-8 AND UNC-52 1 | -0.62 | 0.31 | -0.31 | ||
36 | AT2G36370 | ubiquitin-protein ligases | 0.62 | 0.33 | -0.3 | |||
37 | AT4G35490 | mitochondrial ribosomal protein L11 | mitochondrial ribosomal protein L11 |
-0.62 | 0.3 | -0.32 | ||
38 | AT4G24440 | transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) |
-0.62 | 0.31 | -0.32 | |||
39 | AT2G46230 | PIN domain-like family protein | -0.62 | 0.33 | -0.31 | |||
40 | AT4G13940 | S-adenosyl-L-homocysteine hydrolase | S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1, EMBRYO DEFECTIVE 1395, HOMOLOGY-DEPENDENT GENE SILENCING 1, MATERNAL EFFECT EMBRYO ARREST 58, S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1 |
-0.62 | 0.31 | -0.32 | ||
41 | AT1G27650 | U2 snRNP auxiliary factor small subunit, putative | ATU2AF35A | -0.62 | 0.33 | -0.34 | ||
42 | AT1G65940 | pseudogene, similar to Dof zinc finger protein, blastp match of 61% identity and 1.7e-10 P-value to GP|4996646|dbj|BAA78575.1||AB028132 Dof zinc finger protein {Oryza sativa} |
-0.62 | 0.34 | -0.3 | |||
43 | AT5G63200 | tetratricopeptide repeat (TPR)-containing protein | 0.62 | 0.32 | -0.33 | |||
44 | AT4G02230 | Ribosomal protein L19e family protein | -0.62 | 0.3 | -0.32 | |||
45 | AT3G18165 | modifier of snc1,4 | Modifier of snc1,4 | -0.62 | 0.31 | -0.31 | ||
46 | AT5G14070 | Thioredoxin superfamily protein | ROXY2 | -0.62 | 0.32 | -0.32 | ||
47 | AT5G08160 | serine/threonine protein kinase 3 | serine/threonine protein kinase 3, serine/threonine protein kinase 3 |
-0.62 | 0.31 | -0.3 | ||
48 | AT1G60770 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.32 | -0.34 | |||
49 | AT1G71730 | unknown protein; Has 52 Blast hits to 52 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.62 | 0.33 | -0.31 | |||
50 | AT5G26190 | Cysteine/Histidine-rich C1 domain family protein | 0.62 | 0.32 | -0.31 | |||
51 | AT3G14600 | Ribosomal protein L18ae/LX family protein | -0.61 | 0.29 | -0.33 | |||
52 | AT5G60630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.32 | -0.31 | |||
53 | AT2G47420 | Ribosomal RNA adenine dimethylase family protein | adenosine dimethyl transferase 1A | -0.61 | 0.33 | -0.32 | ||
54 | AT4G01210 | glycosyl transferase family 1 protein | 0.61 | 0.35 | -0.29 | |||
55 | AT3G16050 | pyridoxine biosynthesis 1.2 | A37, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2, pyridoxine biosynthesis 1.2 |
-0.61 | 0.3 | -0.33 | ||
56 | AT4G39990 | RAB GTPase homolog A4B | GTP-BINDING PROTEIN 3, ATRAB11G, ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A 4B, RAB GTPase homolog A4B |
-0.61 | 0.34 | -0.29 | ||
57 | AT5G58160 | actin binding | 0.61 | 0.32 | -0.32 | |||
58 | AT2G37020 | Translin family protein | -0.61 | 0.3 | -0.31 | |||
59 | AT2G19550 | alpha/beta-Hydrolases superfamily protein | 0.61 | 0.29 | -0.32 | |||
60 | AT4G16510 | YbaK/aminoacyl-tRNA synthetase-associated domain | -0.61 | 0.32 | -0.3 | |||
61 | AT4G33720 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
-0.6 | 0.31 | -0.3 | |||
62 | AT2G18060 | vascular related NAC-domain protein 1 | Arabidopsis NAC domain containing protein 37, vascular related NAC-domain protein 1 |
-0.6 | 0.31 | -0.35 | ||
63 | AT2G17360 | Ribosomal protein S4 (RPS4A) family protein | -0.6 | 0.32 | -0.32 | |||
64 | AT3G05420 | acyl-CoA binding protein 4 | acyl-CoA binding protein 4 | -0.6 | 0.29 | -0.32 | ||
65 | AT1G16010 | magnesium transporter 2 | AtMGT2, AtMRS2-1, magnesium transporter 2, MRS2-1 |
0.6 | 0.3 | -0.32 | ||
66 | AT2G46040 | ARID/BRIGHT DNA-binding domain;ELM2 domain protein | -0.6 | 0.32 | -0.3 | |||
67 | AT3G22320 | Eukaryotic rpb5 RNA polymerase subunit family protein | ATRPABC24.3, NRPB5, NRPD5, RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A |
-0.6 | 0.31 | -0.32 | ||
68 | AT2G45790 | phosphomannomutase | PHOSPHOMANNOMUTASE, phosphomannomutase |
-0.6 | 0.32 | -0.32 | ||
69 | AT5G48350 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.6 | 0.3 | -0.31 | |||
70 | AT5G14240 | Thioredoxin superfamily protein | -0.59 | 0.31 | -0.32 | |||
71 | AT5G13590 | unknown protein; Has 150 Blast hits to 121 proteins in 42 species: Archae - 0; Bacteria - 8; Metazoa - 80; Fungi - 5; Plants - 17; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). |
0.59 | 0.29 | -0.33 | |||
72 | AT1G68170 | nodulin MtN21 /EamA-like transporter family protein | -0.59 | 0.31 | -0.32 | |||
73 | AT1G27435 | unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.28 | -0.31 | |||
74 | AT3G49910 | Translation protein SH3-like family protein | -0.59 | 0.31 | -0.31 | |||
75 | AT1G02120 | GRAM domain family protein | VASCULAR ASSOCIATED DEATH1 | 0.59 | 0.32 | -0.32 | ||
76 | AT5G25140 | cytochrome P450, family 71, subfamily B, polypeptide 13 | cytochrome P450, family 71, subfamily B, polypeptide 13 |
-0.59 | 0.3 | -0.33 | ||
77 | AT5G45620 | Proteasome component (PCI) domain protein | -0.59 | 0.3 | -0.31 | |||
78 | AT2G32070 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.59 | 0.32 | -0.32 | |||
79 | AT1G20700 | WUSCHEL related homeobox 14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 |
-0.59 | 0.32 | -0.31 | ||
80 | AT5G20820 | SAUR-like auxin-responsive protein family | -0.59 | 0.33 | -0.32 | |||
81 | AT5G44670 | Domain of unknown function (DUF23) | 0.59 | 0.31 | -0.3 | |||
82 | AT1G23680 | Domain of unknown function (DUF220) | 0.58 | 0.31 | -0.34 | |||
83 | AT5G16270 | sister chromatid cohesion 1 protein 4 | ARABIDOPSIS HOMOLOG OF RAD21 3, sister chromatid cohesion 1 protein 4 |
0.58 | 0.32 | -0.32 | ||
84 | AT1G19390 | Wall-associated kinase family protein | 0.58 | 0.32 | -0.31 | |||
85 | AT1G33813 | transposable element gene | 0.58 | 0.31 | -0.34 | |||
86 | AT1G67540 | unknown protein; Has 18 Blast hits to 18 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.3 | -0.3 | |||
87 | AT1G44740 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 8 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.57 | 0.31 | -0.3 | |||
88 | AT4G08670 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.57 | 0.32 | -0.32 | |||
89 | AT4G11770 | Galactose oxidase/kelch repeat superfamily protein | 0.57 | 0.31 | -0.32 | |||
90 | AT1G23520 | Domain of unknown function (DUF220) | 0.56 | 0.31 | -0.33 | |||
91 | AT4G21050 | Dof-type zinc finger domain-containing protein | 0.56 | 0.33 | -0.32 | |||
92 | AT5G39910 | Pectin lyase-like superfamily protein | 0.55 | 0.32 | -0.32 | |||
93 | AT3G15280 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; Has 36 Blast hits to 36 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.34 | -0.29 | |||
94 | AT2G07110 | BEST Arabidopsis thaliana protein match is: Ribosomal protein S5 domain 2-like superfamily protein (TAIR:AT3G46210.6); Has 82 Blast hits to 82 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 75; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.55 | 0.33 | -0.32 | |||
95 | AT1G30790 | F-box and associated interaction domains-containing protein | 0.55 | 0.32 | -0.33 | |||
96 | AT2G47830 | Cation efflux family protein | 0.55 | 0.32 | -0.3 | |||
97 | AT1G34575 | FAD-binding Berberine family protein | 0.55 | 0.29 | -0.32 | |||
98 | AT1G24030 | Protein kinase superfamily protein | 0.55 | 0.3 | -0.31 | |||
99 | AT1G11690 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 5959 Blast hits to 4807 proteins in 476 species: Archae - 156; Bacteria - 436; Metazoa - 2789; Fungi - 309; Plants - 336; Viruses - 9; Other Eukaryotes - 1924 (source: NCBI BLink). |
0.54 | 0.31 | -0.33 | |||
100 | AT3G29800 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.54 | 0.31 | -0.31 | |||
101 | AT5G60290 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.54 | 0.31 | -0.33 | |||
102 | AT5G38870 | transposable element gene | 0.54 | 0.33 | -0.3 | |||
103 | AT3G04390 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein |
0.54 | 0.32 | -0.34 | |||
104 | AT1G30300 | Metallo-hydrolase/oxidoreductase superfamily protein | 0.53 | 0.32 | -0.32 | |||
105 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
0.53 | 0.31 | -0.3 | ||
106 | AT4G25800 | Calmodulin-binding protein | 0.53 | 0.31 | -0.3 | |||
107 | AT2G10850 | transposable element gene | 0.53 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
108 | C0225 | Raffinose | D-(+)-Raffinose | Raffinose | ajugose biosynthesis II (galactinol-independent), stachyose biosynthesis, stachyose degradation |
0.82 | 0.46 | -0.46 | ||
109 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
0.75 | 0.38 | -0.41 | ||
110 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.73 | 0.44 | -0.45 | ||
111 | C0121 | Isoheptylglucosinolate | - | - | - | -0.71 | 0.46 | -0.43 | ||
112 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.67 | 0.47 | -0.47 | ||
113 | C0107 | Glycine | - | Glycine | 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, folate polyglutamylation, gamma-glutamyl cycle (plant pathway), glutathione biosynthesis, glutathione-mediated detoxification II, folate transformations II, indole glucosinolate breakdown (active in intact plant cell), glycine cleavage complex, camalexin biosynthesis, thiamine biosynthesis II, tRNA charging, glycine biosynthesis, glutathione degradation, photorespiration |
0.65 | 0.42 | -0.42 | ||
114 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
0.6 | 0.33 | -0.33 |