AGICode | AT1G13130 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G13130 | Cellulase (glycosyl hydrolase family 5) protein | 1 | 0.31 | -0.34 | |||
2 | AT5G11850 | Protein kinase superfamily protein | -0.69 | 0.3 | -0.32 | |||
3 | AT1G67000 | Protein kinase superfamily protein | -0.67 | 0.31 | -0.31 | |||
4 | AT3G43250 | Family of unknown function (DUF572) | -0.65 | 0.33 | -0.31 | |||
5 | AT3G57210 | Protein of unknown function (DUF626) | 0.65 | 0.33 | -0.33 | |||
6 | AT3G47660 | Regulator of chromosome condensation (RCC1) family protein | 0.63 | 0.32 | -0.31 | |||
7 | AT5G45370 | nodulin MtN21 /EamA-like transporter family protein | -0.62 | 0.32 | -0.32 | |||
8 | AT1G08270 | CONTAINS InterPro DOMAIN/s: MIT (InterPro:IPR007330); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT2G27600.1); Has 1133 Blast hits to 1133 proteins in 252 species: Archae - 47; Bacteria - 0; Metazoa - 540; Fungi - 145; Plants - 223; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). |
-0.6 | 0.3 | -0.32 | |||
9 | AT5G56900 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
-0.6 | 0.31 | -0.32 | |||
10 | AT3G27980 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.59 | 0.32 | -0.31 | |||
11 | AT5G47250 | LRR and NB-ARC domains-containing disease resistance protein |
-0.58 | 0.32 | -0.31 | |||
12 | AT5G19200 | NAD(P)-binding Rossmann-fold superfamily protein | TSC10B | -0.58 | 0.3 | -0.33 | ||
13 | AT2G43270 | F-box and associated interaction domains-containing protein | 0.58 | 0.32 | -0.31 | |||
14 | AT3G29600 | transposable element gene | 0.57 | 0.32 | -0.28 | |||
15 | AT1G76220 | Arabidopsis protein of unknown function (DUF241) | 0.57 | 0.31 | -0.3 | |||
16 | AT3G57750 | Protein kinase superfamily protein | -0.57 | 0.33 | -0.32 | |||
17 | AT3G01850 | Aldolase-type TIM barrel family protein | -0.57 | 0.31 | -0.3 | |||
18 | AT3G07890 | Ypt/Rab-GAP domain of gyp1p superfamily protein | -0.56 | 0.32 | -0.31 | |||
19 | AT1G19500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.32 | -0.31 | |||
20 | AT1G65670 | cytochrome P450, family 702, subfamily A, polypeptide 1 | cytochrome P450, family 702, subfamily A, polypeptide 1 |
-0.55 | 0.31 | -0.33 | ||
21 | AT2G33000 | ubiquitin-associated (UBA)/TS-N domain-containing protein-related |
0.54 | 0.32 | -0.32 | |||
22 | AT3G02940 | myb domain protein 107 | myb domain protein 107, myb domain protein 107 |
0.54 | 0.32 | -0.33 | ||
23 | AT3G57140 | sugar-dependent 1-like | sugar-dependent 1-like | 0.53 | 0.32 | -0.31 | ||
24 | AT2G33680 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.53 | 0.34 | -0.29 | |||
25 | AT4G28670 | Protein kinase family protein with domain of unknown function (DUF26) |
0.53 | 0.32 | -0.32 | |||
26 | AT5G60070 | ankyrin repeat family protein | -0.53 | 0.31 | -0.31 | |||
27 | AT5G20310 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.52 | 0.33 | -0.33 | |||
28 | AT1G72060 | serine-type endopeptidase inhibitors | 0.52 | 0.3 | -0.32 | |||
29 | AT2G39550 | Prenyltransferase family protein | GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT, GGB, PGGT-I |
-0.52 | 0.32 | -0.31 | ||
30 | AT1G13330 | Arabidopsis Hop2 homolog | Arabidopsis Hop2 homolog | 0.52 | 0.33 | -0.33 | ||
31 | AT5G03590 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.52 | 0.33 | -0.33 | |||
32 | AT1G26090 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.52 | 0.3 | -0.3 | |||
33 | AT5G25920 | BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G29750.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.51 | 0.31 | -0.3 | |||
34 | AT5G53510 | oligopeptide transporter 9 | oligopeptide transporter 9, oligopeptide transporter 9 |
-0.51 | 0.33 | -0.33 | ||
35 | AT1G49490 | Leucine-rich repeat (LRR) family protein | -0.5 | 0.3 | -0.33 | |||
36 | AT3G45690 | Major facilitator superfamily protein | -0.5 | 0.31 | -0.32 | |||
37 | AT5G63280 | C2H2-like zinc finger protein | -0.5 | 0.31 | -0.33 | |||
38 | AT1G21830 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.5 | 0.33 | -0.3 | |||
39 | AT3G25630 | transposable element gene | 0.5 | 0.3 | -0.31 | |||
40 | AT5G57940 | cyclic nucleotide gated channel 5 | cyclic nucleotide gated channel 5, cyclic nucleotide gated channel 5 |
-0.5 | 0.33 | -0.32 | ||
41 | AT3G29220 | transposable element gene | -0.49 | 0.32 | -0.32 | |||
42 | AT1G73820 | Ssu72-like family protein | -0.49 | 0.31 | -0.31 | |||
43 | AT2G33420 | Protein of unknown function (DUF810) | 0.49 | 0.3 | -0.31 | |||
44 | AT3G43020 | transposable element gene | 0.49 | 0.32 | -0.3 | |||
45 | AT2G40790 | C-terminal cysteine residue is changed to a serine 2 | C-terminal cysteine residue is changed to a serine 2, C-terminal cysteine residue is changed to a serine 2 |
0.48 | 0.32 | -0.31 | ||
46 | AT3G51190 | Ribosomal protein L2 family | -0.48 | 0.31 | -0.33 | |||
47 | AT1G61850 | phospholipases;galactolipases | -0.48 | 0.31 | -0.3 | |||
48 | AT1G01280 | cytochrome P450, family 703, subfamily A, polypeptide 2 | CYP703, cytochrome P450, family 703, subfamily A, polypeptide 2 |
-0.48 | 0.31 | -0.31 | ||
49 | AT1G22140 | unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
-0.48 | 0.32 | -0.3 | |||
50 | AT2G41020 | WW domain-containing protein | -0.48 | 0.3 | -0.32 | |||
51 | AT2G14680 | myosin heavy chain-related | maternal effect embryo arrest 13 | -0.48 | 0.32 | -0.31 | ||
52 | AT1G36670 | transposable element gene | 0.47 | 0.33 | -0.33 | |||
53 | AT3G09070 | Protein of unknown function (DUF740) | 0.47 | 0.31 | -0.31 | |||
54 | AT3G13270 | transposable element gene | 0.46 | 0.33 | -0.33 | |||
55 | AT1G78700 | BES1/BZR1 homolog 4 | BES1/BZR1 homolog 4 | 0.46 | 0.3 | -0.33 | ||
56 | AT1G29630 | 5'-3' exonuclease family protein | 0.46 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
57 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.75 | 0.47 | -0.41 | ||
58 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.71 | 0.42 | -0.45 | ||
59 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | -0.7 | 0.45 | -0.42 | ||
60 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.7 | 0.42 | -0.44 | ||
61 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.66 | 0.44 | -0.46 | ||
62 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.63 | 0.46 | -0.43 | ||
63 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
-0.61 | 0.43 | -0.42 | ||
64 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.61 | 0.46 | -0.43 | ||
65 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
-0.6 | 0.45 | -0.44 |