AT2G40300 : ferritin 4
Query Information
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AGICode AT2G40300
Description ferritin 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G40300 ferritin 4 ferritin 4, ferritin 4 1 0.31 -0.34
2 AT5G51720 2 iron, 2 sulfur cluster binding 0.86 0.31 -0.31
3 AT1G58290 Glutamyl-tRNA reductase family protein Arabidopsis thaliana hemA 1, HEMA1 0.82 0.32 -0.32
4 AT2G36885 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to
172 proteins in 58 species: Archae - 0; Bacteria - 116;
Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 24 (source: NCBI BLink).		 0.82 0.33 -0.33
5 AT5G17170 rubredoxin family protein enhancer of sos3-1 0.81 0.3 -0.31
6 AT5G51010 Rubredoxin-like superfamily protein 0.76 0.32 -0.31
7 AT3G17770 Dihydroxyacetone kinase -0.76 0.33 -0.32
8 AT3G18290 zinc finger protein-related BRUTUS, embryo defective 2454 -0.74 0.31 -0.33
9 AT5G24850 cryptochrome 3 cryptochrome 3 0.73 0.31 -0.31
10 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.73 0.31 -0.3
11 AT4G04770 ATP binding cassette protein 1 ATP binding cassette protein 1,
ATP-binding cassette I8, ATP
binding cassette protein 1,
ARABIDOPSIS THALIANA NUCLEOSOME
ASSEMBLY PROTEIN 1, LONG AFTER FR		 0.72 0.33 -0.31
12 AT5G01600 ferretin 1 ARABIDOPSIS THALIANA FERRETIN 1,
ferretin 1		 0.71 0.32 -0.33
13 AT4G35090 catalase 2 catalase 2 0.7 0.31 -0.31
14 AT4G08390 stromal ascorbate peroxidase stromal ascorbate peroxidase 0.7 0.3 -0.34
15 AT5G12980 Cell differentiation, Rcd1-like protein 0.7 0.33 -0.32
16 AT1G55915 zinc ion binding 0.69 0.3 -0.31
17 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.69 0.32 -0.31
18 AT3G43670 Copper amine oxidase family protein 0.68 0.32 -0.32
19 AT3G56360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast
hits to 45 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.31 -0.29
20 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.67 0.3 -0.32
21 AT5G67330 natural resistance associated macrophage protein 4 ARABIDOPSIS THALIANA NATURAL
RESISTANCE ASSOCIATED MACROPHAGE
PROTEIN 4, natural resistance
associated macrophage protein 4		 -0.67 0.32 -0.3
22 AT3G56980 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BHLH039, OBP3-RESPONSIVE GENE 3 -0.66 0.32 -0.31
23 AT1G47400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47395.1); Has 11 Blast hits
to 11 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.31
24 AT3G47640 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 POPEYE -0.64 0.3 -0.34
25 AT3G48710 DEK domain-containing chromatin associated protein -0.64 0.29 -0.32
26 AT5G39710 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 2745 0.64 0.32 -0.33
27 AT1G43040 SAUR-like auxin-responsive protein family 0.62 0.29 -0.3
28 AT5G53450 OBP3-responsive gene 1 OBP3-responsive gene 1 -0.62 0.33 -0.31
29 AT3G26740 CCR-like CCR-like -0.62 0.32 -0.33
30 AT1G55590 RNI-like superfamily protein -0.61 0.32 -0.33
31 AT1G11930 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 -0.61 0.31 -0.33
32 AT5G66930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1649 (InterPro:IPR012445); Has 236
Blast hits to 236 proteins in 105 species: Archae - 0;
Bacteria - 0; Metazoa - 93; Fungi - 70; Plants - 56;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 -0.61 0.29 -0.3
33 AT4G31820 Phototropic-responsive NPH3 family protein ENHANCER OF PINOID, MACCHI-BOU 4,
NAKED PINS IN YUC MUTANTS 1		 -0.61 0.32 -0.31
34 AT5G27320 alpha/beta-Hydrolases superfamily protein ATGID1C, GA INSENSITIVE DWARF1C -0.61 0.34 -0.3
35 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.61 0.32 -0.33
36 AT5G05250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.3 -0.3
37 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.32 -0.32
38 AT4G00390 DNA-binding storekeeper protein-related transcriptional
regulator		 0.6 0.32 -0.34
39 AT1G21140 Vacuolar iron transporter (VIT) family protein 0.6 0.33 -0.33
40 AT2G38590 F-box and associated interaction domains-containing protein 0.6 0.32 -0.31
41 AT2G31080 transposable element gene 0.59 0.34 -0.31
42 AT4G32120 Galactosyltransferase family protein 0.59 0.3 -0.33
43 AT3G22250 UDP-Glycosyltransferase superfamily protein -0.59 0.31 -0.31
44 AT3G27530 golgin candidate 6 golgin candidate 6, MAIGO 4 -0.58 0.33 -0.32
45 AT4G24020 NIN like protein 7 NIN like protein 7 -0.58 0.31 -0.32
46 AT3G57785 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits
to 121 proteins in 51 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.58 0.31 -0.31
47 AT1G78050 phosphoglycerate/bisphosphoglycerate mutase phosphoglycerate/bisphosphoglycera
te mutase		 0.57 0.31 -0.3
48 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 -0.57 0.3 -0.32
49 AT1G47660 unknown protein; Has 5165 Blast hits to 2753 proteins in
450 species: Archae - 12; Bacteria - 1193; Metazoa - 731;
Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes
- 1931 (source: NCBI BLink).		 0.57 0.31 -0.31
50 AT4G32760 ENTH/VHS/GAT family protein -0.56 0.3 -0.31
51 AT3G56590 hydroxyproline-rich glycoprotein family protein -0.56 0.32 -0.32
52 AT4G00270 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.54 0.35 -0.33
53 AT3G01080 WRKY DNA-binding protein 58 WRKY DNA-BINDING PROTEIN 58, WRKY
DNA-binding protein 58		 -0.54 0.3 -0.33
54 AT3G51370 Protein phosphatase 2C family protein -0.53 0.3 -0.33
55 AT4G36780 BES1/BZR1 homolog 2 BES1/BZR1 homolog 2 -0.53 0.3 -0.3
56 AT3G02125 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in
202 species: Archae - 4; Bacteria - 111; Metazoa - 942;
Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes -
774 (source: NCBI BLink).		 -0.53 0.3 -0.32
57 AT5G45190 Cyclin family protein -0.53 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
58 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.81 0.43 -0.46 C0091
59 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.79 0.44 -0.45
60 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.73 0.46 -0.44 C0032
61 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		-0.73 0.44 -0.46 C0027
62 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.71 0.45 -0.45 C0262
63 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.7 0.45 -0.44 C0099
64 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis -0.7 0.44 -0.47
65 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		-0.69 0.42 -0.46 C0073
66 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) -0.68 0.45 -0.46 C0075
67 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.67 0.44 -0.47 C0053
68 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.65 0.48 -0.43 C0261
69 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.63 0.47 -0.42 C0088
70 C0068 Citric acid - Citrate acetyl-CoA biosynthesis (from citrate),
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		-0.6 0.3 -0.33 C0068
71 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.59 0.45 -0.4 C0087
72 C0200 Phosphatidylglycerol-32:0 - Phosphatidylglycerol-32:0 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		-0.59 0.32 -0.34
73 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		-0.55 0.32 -0.33 C0005