AT1G54770 : -
Query Information
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AGICode AT1G54770
Description Fcf2 pre-rRNA processing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G54770 Fcf2 pre-rRNA processing protein 1 0.3 -0.31
2 AT2G45710 Zinc-binding ribosomal protein family protein 0.89 0.28 -0.33
3 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.88 0.33 -0.31
4 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.88 0.35 -0.31
5 AT2G44860 Ribosomal protein L24e family protein 0.88 0.31 -0.3
6 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.87 0.31 -0.32
7 AT2G31710 Vacuolar ATPase assembly integral membrane protein
VMA21-like domain		 0.87 0.33 -0.32
8 AT5G27770 Ribosomal L22e protein family 0.87 0.33 -0.31
9 AT1G04480 Ribosomal protein L14p/L23e family protein 0.86 0.31 -0.34
10 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.86 0.31 -0.31
11 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.85 0.32 -0.31
12 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 0.85 0.34 -0.31
13 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.85 0.32 -0.32
14 AT4G33865 Ribosomal protein S14p/S29e family protein 0.85 0.31 -0.31
15 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.85 0.32 -0.31
16 AT2G43460 Ribosomal L38e protein family 0.85 0.3 -0.32
17 AT1G22270 Trm112p-like protein 0.85 0.33 -0.32
18 AT5G41970 Metal-dependent protein hydrolase 0.84 0.31 -0.31
19 AT1G14810 semialdehyde dehydrogenase family protein 0.84 0.33 -0.33
20 AT5G35620 Eukaryotic initiation factor 4E protein EUKARYOTIC INITIATION FACTOR
(ISO)4E, EUKARYOTIC TRANSLATION
INITATION FACTOR 4E2, eukaryotic
translation Initiation Factor
isoform 4E, LSP, LOSS OF
SUSCEPTIBILITY TO POTYVIRUS 1		 0.84 0.33 -0.31
21 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.84 0.32 -0.31
22 AT5G09510 Ribosomal protein S19 family protein 0.84 0.32 -0.31
23 AT1G64090 Reticulan like protein B3 Reticulan like protein B3 0.84 0.29 -0.33
24 AT5G05470 eukaryotic translation initiation factor 2 alpha subunit ATEIF2-A2, eukaryotic translation
initiation factor 2 alpha subunit,
EIF2-A2		 0.84 0.3 -0.32
25 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.84 0.31 -0.32
26 AT1G18540 Ribosomal protein L6 family protein 0.84 0.32 -0.31
27 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.84 0.31 -0.31
28 AT2G39390 Ribosomal L29 family protein 0.84 0.33 -0.31
29 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.84 0.31 -0.31
30 AT3G25940 TFIIB zinc-binding protein 0.83 0.32 -0.31
31 AT1G04340 HR-like lesion-inducing protein-related 0.83 0.32 -0.34
32 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.83 0.31 -0.3
33 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.83 0.31 -0.3
34 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.83 0.32 -0.33
35 AT2G32220 Ribosomal L27e protein family 0.83 0.33 -0.3
36 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 0.83 0.3 -0.32
37 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.83 0.33 -0.32
38 AT2G44510 CDK inhibitor P21 binding protein 0.83 0.33 -0.3
39 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.83 0.34 -0.33
40 AT3G07230 wound-responsive protein-related 0.82 0.32 -0.31
41 AT2G40420 Transmembrane amino acid transporter family protein -0.82 0.33 -0.31
42 AT4G32520 serine hydroxymethyltransferase 3 SERINE HYDROXYMETHYLTRANSFERASE 3,
serine hydroxymethyltransferase 3		 0.82 0.3 -0.29
43 AT2G25670 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928
proteins in 1799 species: Archae - 86; Bacteria - 6347;
Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses -
259; Other Eukaryotes - 13792 (source: NCBI BLink).		 0.82 0.31 -0.31
44 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.82 0.33 -0.33
45 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.82 0.32 -0.29
46 AT3G55620 Translation initiation factor IF6 eukaryotic initiation facor 6A,
embryo defective 1624		 0.82 0.31 -0.31
47 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.82 0.31 -0.3
48 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.82 0.31 -0.31
49 AT5G59180 DNA-directed RNA polymerase II NRPB7 0.82 0.31 -0.32
50 AT1G48830 Ribosomal protein S7e family protein 0.82 0.32 -0.33
51 AT1G55150 DEA(D/H)-box RNA helicase family protein 0.82 0.34 -0.32
52 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.82 0.33 -0.33
53 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.81 0.3 -0.32
54 AT1G75670 DNA-directed RNA polymerases 0.81 0.31 -0.32
55 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.81 0.31 -0.3
56 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.81 0.31 -0.31
57 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.8 0.33 -0.31
58 AT3G57000 nucleolar essential protein-related 0.8 0.3 -0.33
59 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.8 0.31 -0.3
60 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.8 0.33 -0.34
61 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.32 -0.31
62 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.8 0.33 -0.32
63 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.8 0.3 -0.3
64 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.8 0.34 -0.31
65 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.8 0.3 -0.3
66 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 0.8 0.31 -0.32
67 AT3G19360 Zinc finger (CCCH-type) family protein 0.8 0.32 -0.33
68 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C		 0.8 0.32 -0.3
69 AT1G12270 stress-inducible protein, putative Hop1 0.8 0.3 -0.33
70 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.33 -0.33
71 AT1G66070 Translation initiation factor eIF3 subunit 0.79 0.29 -0.32
72 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.79 0.32 -0.34
73 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.79 0.33 -0.3
74 AT1G48570 zinc finger (Ran-binding) family protein 0.79 0.33 -0.31
75 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.79 0.33 -0.31
76 AT2G18740 Small nuclear ribonucleoprotein family protein 0.79 0.32 -0.32
77 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.79 0.31 -0.32
78 AT5G06360 Ribosomal protein S8e family protein 0.79 0.32 -0.32
79 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 0.79 0.29 -0.32
80 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.79 0.32 -0.33
81 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.79 0.33 -0.32
82 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.79 0.31 -0.32
83 AT3G55605 Mitochondrial glycoprotein family protein 0.79 0.31 -0.32
84 AT1G28260 Telomerase activating protein Est1 -0.79 0.32 -0.31
85 AT2G25590 Plant Tudor-like protein -0.78 0.34 -0.31
86 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.31 -0.32
87 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 -0.75 0.31 -0.32
88 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.75 0.33 -0.32
89 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.75 0.3 -0.3
90 AT4G38350 Patched family protein -0.75 0.3 -0.34
91 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.75 0.31 -0.32
92 AT3G13672 TRAF-like superfamily protein -0.75 0.32 -0.31
93 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.75 0.34 -0.31
94 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 -0.74 0.34 -0.33
95 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.74 0.33 -0.3
96 AT1G09910 Rhamnogalacturonate lyase family protein -0.74 0.31 -0.33
97 AT3G07350 Protein of unknown function (DUF506) -0.73 0.31 -0.31
98 AT1G73920 alpha/beta-Hydrolases superfamily protein -0.73 0.3 -0.32
99 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.32
100 AT4G17030 expansin-like B1 AT-EXPR, expansin-like B1,
ATEXPR1, ATHEXP BETA 3.1,
expansin-like B1, EXPR		 -0.72 0.28 -0.32
101 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.71 0.31 -0.31
102 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 -0.71 0.33 -0.3
103 AT5G65760 Serine carboxypeptidase S28 family protein -0.71 0.31 -0.3
104 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.31 -0.32
105 AT3G52060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.7 0.33 -0.3
106 AT4G05100 myb domain protein 74 myb domain protein 74, myb domain
protein 74		 -0.7 0.33 -0.33
107 AT3G57980 DNA-binding bromodomain-containing protein -0.69 0.32 -0.31
108 AT5G63560 HXXXD-type acyl-transferase family protein -0.69 0.32 -0.32
109 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.32 -0.32
110 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.68 0.32 -0.31
111 AT1G16730 unknown protein 6 unknown protein 6 -0.68 0.31 -0.29
112 AT2G30500 Kinase interacting (KIP1-like) family protein -0.68 0.32 -0.31
113 AT3G05640 Protein phosphatase 2C family protein -0.68 0.34 -0.3
114 AT1G64110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 DUO1-activated ATPase 1 -0.67 0.3 -0.31
115 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.67 0.33 -0.33
116 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.66 0.31 -0.3
117 AT1G73750 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.66 0.32 -0.31
118 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.66 0.31 -0.31
119 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.66 0.32 -0.32
120 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.66 0.33 -0.31
121 AT3G54390 sequence-specific DNA binding transcription factors -0.66 0.31 -0.34
122 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.32 -0.34
123 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA -0.66 0.3 -0.3
124 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 -0.65 0.31 -0.33
125 AT5G50360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.32 -0.32
126 AT2G34840 Coatomer epsilon subunit -0.65 0.31 -0.3
127 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.65 0.3 -0.33
128 AT2G25450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.33 -0.3
129 AT2G36640 embryonic cell protein 63 embryonic cell protein 63,
embryonic cell protein 63		 -0.65 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.71 0.29 -0.33 C0137
131 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.7 0.43 -0.46 C0056
132 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.68 0.46 -0.47 C0053
133 C0097 Glucosamine-6-phosphate D-Glucosamine-6-phosphate D-Glucosamine-6-phosphate UDP-N-acetyl-D-glucosamine biosynthesis II -0.68 0.31 -0.3 C0097
134 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.67 0.46 -0.46 C0099
135 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.67 0.42 -0.47 C0032