AGICode | AT1G05030 |
Description | Major facilitator superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G05030 | Major facilitator superfamily protein | 1 | 0.3 | -0.31 | |||
2 | AT1G59520 | CW7 | CW7 | 0.73 | 0.32 | -0.34 | ||
3 | AT3G05650 | receptor like protein 32 | receptor like protein 32, receptor like protein 32 |
0.68 | 0.3 | -0.3 | ||
4 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
0.67 | 0.31 | -0.3 | ||
5 | AT3G46440 | UDP-XYL synthase 5 | UDP-XYL synthase 5 | -0.67 | 0.31 | -0.31 | ||
6 | AT2G30050 | transducin family protein / WD-40 repeat family protein | -0.66 | 0.32 | -0.32 | |||
7 | AT5G46880 | homeobox-7 | homeobox-7, HOMEODOMAIN GLABROUS 5 | 0.66 | 0.31 | -0.35 | ||
8 | AT1G50440 | RING/FYVE/PHD zinc finger superfamily protein | 0.65 | 0.31 | -0.3 | |||
9 | AT1G05200 | glutamate receptor 3.4 | glutamate receptor 3.4, glutamate receptor 3.4, GLUR3 |
0.65 | 0.32 | -0.32 | ||
10 | AT3G25900 | Homocysteine S-methyltransferase family protein | ATHMT-1, HMT-1 | -0.65 | 0.32 | -0.31 | ||
11 | AT5G48560 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.65 | 0.33 | -0.31 | |||
12 | AT1G07190 | BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
0.64 | 0.3 | -0.3 | |||
13 | AT5G40200 | DegP protease 9 | DegP protease 9 | -0.64 | 0.32 | -0.3 | ||
14 | AT2G24220 | purine permease 5 | purine permease 5, purine permease 5 |
0.64 | 0.32 | -0.34 | ||
15 | AT3G13160 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.64 | 0.33 | -0.31 | |||
16 | AT5G04600 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.64 | 0.3 | -0.32 | |||
17 | AT3G54770 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.63 | 0.33 | -0.33 | |||
18 | AT1G17860 | Kunitz family trypsin and protease inhibitor protein | -0.63 | 0.3 | -0.32 | |||
19 | AT1G52070 | Mannose-binding lectin superfamily protein | -0.62 | 0.33 | -0.32 | |||
20 | AT3G01015 | TPX2 (targeting protein for Xklp2) protein family | 0.62 | 0.3 | -0.33 | |||
21 | AT1G04070 | translocase of outer membrane 22-I | ATTOM22-I, translocase of outer membrane 22-I |
-0.62 | 0.32 | -0.31 | ||
22 | AT1G74500 | activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 |
activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, TARGET OF MONOPTEROS 7 |
-0.62 | 0.34 | -0.3 | ||
23 | AT2G36320 | A20/AN1-like zinc finger family protein | -0.61 | 0.29 | -0.31 | |||
24 | AT5G65480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.61 | 0.32 | -0.31 | |||
25 | AT1G20900 | Predicted AT-hook DNA-binding family protein | AT-hook motif nuclear-localized protein 27, ESCAROLA, ORESARA 7 |
-0.61 | 0.33 | -0.3 | ||
26 | AT3G22360 | alternative oxidase 1B | alternative oxidase 1B | -0.61 | 0.33 | -0.3 | ||
27 | AT5G35240 | transposable element gene | 0.61 | 0.32 | -0.31 | |||
28 | AT5G12410 | THUMP domain-containing protein | -0.61 | 0.33 | -0.31 | |||
29 | AT4G27850 | Glycine-rich protein family | 0.61 | 0.31 | -0.33 | |||
30 | AT5G56160 | Sec14p-like phosphatidylinositol transfer family protein | 0.6 | 0.33 | -0.32 | |||
31 | AT3G05020 | acyl carrier protein 1 | ACYL CARRIER PROTEIN, acyl carrier protein 1 |
-0.6 | 0.32 | -0.31 | ||
32 | AT5G59800 | methyl-CPG-binding domain 7 | ARABIDOPSIS THALIANA METHYL-CPG-BINDING DOMAIN 7, methyl-CPG-binding domain 7 |
0.6 | 0.32 | -0.32 | ||
33 | AT4G31320 | SAUR-like auxin-responsive protein family | -0.6 | 0.31 | -0.33 | |||
34 | AT5G19680 | Leucine-rich repeat (LRR) family protein | -0.6 | 0.32 | -0.32 | |||
35 | AT2G26290 | root-specific kinase 1 | root-specific kinase 1 | -0.6 | 0.31 | -0.31 | ||
36 | AT5G63660 | Scorpion toxin-like knottin superfamily protein | LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 |
-0.6 | 0.31 | -0.32 | ||
37 | AT1G60260 | beta glucosidase 5 | beta glucosidase 5 | 0.6 | 0.31 | -0.31 | ||
38 | AT2G29995 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07175.1); Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.31 | -0.32 | |||
39 | AT5G24270 | Calcium-binding EF-hand family protein | SALT OVERLY SENSITIVE 3, CALCINEURIN B-LIKE PROTEIN 4, SALT OVERLY SENSITIVE 3 |
-0.59 | 0.32 | -0.3 | ||
40 | AT5G52540 | Protein of unknown function (DUF819) | 0.59 | 0.3 | -0.31 | |||
41 | AT1G78130 | Major facilitator superfamily protein | unfertilized embryo sac 2 | 0.59 | 0.32 | -0.31 | ||
42 | AT1G40230 | transposable element gene | 0.59 | 0.31 | -0.28 | |||
43 | AT5G53510 | oligopeptide transporter 9 | oligopeptide transporter 9, oligopeptide transporter 9 |
0.58 | 0.33 | -0.31 | ||
44 | AT4G14180 | putative recombination initiation defect 1 | putative recombination initiation defect 1, putative recombination initiation defect 1 |
0.58 | 0.32 | -0.3 | ||
45 | AT4G35050 | Transducin family protein / WD-40 repeat family protein | MULTICOPY SUPPRESSOR OF IRA1 3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 |
-0.58 | 0.31 | -0.33 | ||
46 | AT4G13190 | Protein kinase superfamily protein | -0.58 | 0.32 | -0.32 | |||
47 | AT4G31280 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.31 | -0.34 | |||
48 | AT5G28310 | NAD(P)-binding Rossmann-fold superfamily protein | 0.58 | 0.34 | -0.32 | |||
49 | AT4G26950 | Protein of unknown function, DUF584 | 0.58 | 0.31 | -0.31 | |||
50 | AT1G23380 | KNOTTED1-like homeobox gene 6 | KNOTTED1-like homeobox gene 6, KNAT6L, KNAT6S |
-0.58 | 0.34 | -0.31 | ||
51 | AT2G32600 | hydroxyproline-rich glycoprotein family protein | -0.58 | 0.32 | -0.32 | |||
52 | AT4G13660 | pinoresinol reductase 2 | ATPRR2, pinoresinol reductase 2 | -0.58 | 0.27 | -0.32 | ||
53 | AT1G07210 | Ribosomal protein S18 | -0.58 | 0.31 | -0.32 | |||
54 | AT5G45090 | phloem protein 2-A7 | phloem protein 2-A7, phloem protein 2-A7 |
0.57 | 0.31 | -0.29 | ||
55 | AT1G78150 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.33 | |||
56 | AT1G77270 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits to 388 proteins in 92 species: Archae - 0; Bacteria - 31; Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink). |
0.57 | 0.31 | -0.3 | |||
57 | AT4G38130 | histone deacetylase 1 | ARABIDOPSIS HISTONE DEACETYLASE 1, ARABIDOPSIS HISTONE DEACETYLASE 19, histone deacetylase 1, HDA1, HISTONE DEACETYLASE 19, RPD3A |
-0.57 | 0.3 | -0.3 | ||
58 | AT2G16960 | ARM repeat superfamily protein | 0.57 | 0.29 | -0.34 | |||
59 | AT4G34970 | actin depolymerizing factor 9 | actin depolymerizing factor 9 | -0.57 | 0.33 | -0.31 | ||
60 | AT2G43150 | Proline-rich extensin-like family protein | 0.57 | 0.33 | -0.33 | |||
61 | AT5G26190 | Cysteine/Histidine-rich C1 domain family protein | 0.57 | 0.33 | -0.29 | |||
62 | AT1G61500 | S-locus lectin protein kinase family protein | 0.56 | 0.3 | -0.31 | |||
63 | AT1G26130 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
0.56 | 0.32 | -0.31 | |||
64 | AT3G51910 | heat shock transcription factor A7A | ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, heat shock transcription factor A7A |
-0.56 | 0.32 | -0.32 | ||
65 | AT1G06020 | pfkB-like carbohydrate kinase family protein | 0.56 | 0.3 | -0.3 | |||
66 | AT5G46140 | Protein of unknown function (DUF295) | 0.55 | 0.32 | -0.32 | |||
67 | AT1G30160 | Protein of unknown function (DUF295) | 0.55 | 0.3 | -0.32 | |||
68 | AT3G28345 | ABC transporter family protein | ATP-binding cassette B15, multi-drug resistance 13 |
-0.55 | 0.32 | -0.33 | ||
69 | AT2G21060 | glycine-rich protein 2B | COLD SHOCK DOMAIN PROTEIN 4, glycine-rich protein 2B, glycine-rich protein 2B |
-0.55 | 0.31 | -0.31 | ||
70 | AT2G19580 | tetraspanin2 | tetraspanin2 | -0.55 | 0.31 | -0.32 | ||
71 | AT3G60310 | unknown protein; Has 22 Blast hits to 18 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.31 | -0.3 | |||
72 | AT4G32890 | GATA transcription factor 9 | GATA transcription factor 9 | -0.55 | 0.31 | -0.3 | ||
73 | AT1G15170 | MATE efflux family protein | -0.55 | 0.31 | -0.32 | |||
74 | AT3G26760 | NAD(P)-binding Rossmann-fold superfamily protein | -0.54 | 0.33 | -0.31 | |||
75 | AT1G77640 | Integrase-type DNA-binding superfamily protein | -0.54 | 0.33 | -0.32 | |||
76 | AT2G41650 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.32 | -0.31 | |||
77 | AT1G36060 | Integrase-type DNA-binding superfamily protein | -0.53 | 0.31 | -0.33 | |||
78 | AT1G31050 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.53 | 0.31 | -0.3 | |||
79 | AT5G05880 | UDP-Glycosyltransferase superfamily protein | -0.53 | 0.3 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
80 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | 0.76 | 0.43 | -0.46 | ||
81 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
0.76 | 0.46 | -0.45 | ||
82 | C0129 | Kaempferol-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside | Kaempferol-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside | - | kaempferol glucoside biosynthesis (Arabidopsis) | 0.75 | 0.44 | -0.46 | ||
83 | C0195 | Phenylpyruvic acid | - | Phenylpyruvate | phenylalanine degradation III | 0.71 | 0.43 | -0.41 | ||
84 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.71 | 0.45 | -0.45 | ||
85 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | 0.71 | 0.44 | -0.46 | ||
86 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.7 | 0.44 | -0.44 | ||
87 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.69 | 0.45 | -0.43 | ||
88 | C0010 | myo-Inositol-1-phosphate | D,L-myo-Inositol-1-phosphate | 1D-myo-Inositol (3)-phosphate | myo-inositol biosynthesis, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) |
0.69 | 0.44 | -0.47 | ||
89 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.68 | 0.48 | -0.45 | ||
90 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | 0.66 | 0.43 | -0.45 | ||
91 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | 0.65 | 0.41 | -0.43 | ||
92 | C0142 | Malonic acid | - | Malonate | fatty acid biosynthesis (plant mitochondria) | 0.64 | 0.32 | -0.3 | ||
93 | C0184 | MST_3110.4 | - | - | - | 0.64 | 0.44 | -0.46 |