AT2G27350 : otubain-like deubiquitinase 1
Query Information
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AGICode AT2G27350
Description OTU-like cysteine protease family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 1 0.29 -0.32
2 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.78 0.31 -0.34
3 AT5G65070 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 69, FCL4, MADS
AFFECTING FLOWERING 4		 -0.76 0.33 -0.33
4 AT3G61640 arabinogalactan protein 20 arabinogalactan protein 20,
Arabinogalactan protein 20		 -0.74 0.31 -0.29
5 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 -0.74 0.31 -0.32
6 AT2G26410 IQ-domain 4 IQ-domain 4 -0.73 0.32 -0.32
7 AT1G59830 protein phosphatase 2A-2 protein phosphatase 2A-2 -0.68 0.33 -0.33
8 AT3G20620 F-box family protein-related 0.68 0.33 -0.31
9 AT2G47830 Cation efflux family protein 0.68 0.3 -0.31
10 AT1G04250 AUX/IAA transcriptional regulator family protein AUXIN RESISTANT 3, indole-3-acetic
acid inducible 17		 -0.68 0.32 -0.32
11 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.3 -0.33
12 AT2G45400 NAD(P)-binding Rossmann-fold superfamily protein BEN1 -0.67 0.31 -0.3
13 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.31 -0.32
14 AT1G55580 GRAS family transcription factor Lateral Suppressor, SCARECROW-LIKE
18		 -0.66 0.3 -0.31
15 AT3G17330 evolutionarily conserved C-terminal region 6 evolutionarily conserved
C-terminal region 6		 -0.66 0.31 -0.3
16 AT2G30710 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.64 0.32 -0.32
17 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 0.64 0.32 -0.33
18 AT4G14560 indole-3-acetic acid inducible AUXIN RESISTANT 5, indole-3-acetic
acid inducible		 -0.64 0.3 -0.3
19 AT4G30900 DNAse I-like superfamily protein 0.64 0.29 -0.3
20 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 0.64 0.32 -0.31
21 AT3G51540 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G08670.1); Has 22744 Blast
hits to 9965 proteins in 783 species: Archae - 64; Bacteria
- 2760; Metazoa - 8515; Fungi - 3864; Plants - 499; Viruses
- 702; Other Eukaryotes - 6340 (source: NCBI BLink).		 -0.64 0.36 -0.33
22 AT4G03760 transposable element gene -0.63 0.32 -0.33
23 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 -0.63 0.31 -0.3
24 AT3G62330 Zinc knuckle (CCHC-type) family protein 0.63 0.32 -0.33
25 AT3G31360 transposable element gene 0.63 0.31 -0.34
26 AT4G30320 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.62 0.3 -0.34
27 AT5G18940 Mo25 family protein 0.62 0.33 -0.32
28 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein 0.62 0.32 -0.32
29 AT4G04150 transposable element gene 0.62 0.33 -0.33
30 AT2G19550 alpha/beta-Hydrolases superfamily protein 0.62 0.32 -0.3
31 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.62 0.31 -0.29
32 AT5G59780 myb domain protein 59 MYB DOMAIN PROTEIN 59, ATMYB59-1,
ATMYB59-2, ATMYB59-3, myb domain
protein 59		 0.61 0.29 -0.32
33 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.35 -0.32
34 AT2G01680 Ankyrin repeat family protein 0.61 0.31 -0.31
35 AT1G19220 auxin response factor 19 AUXIN RESPONSE FACTOR11, auxin
response factor 19,
indole-3-acetic acid inducible 22		 -0.61 0.31 -0.31
36 AT5G62250 microtubule-associated protein 65-9 microtubule-associated protein
65-9		 -0.61 0.31 -0.3
37 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 0.61 0.3 -0.3
38 AT2G18060 vascular related NAC-domain protein 1 Arabidopsis NAC domain containing
protein 37, vascular related
NAC-domain protein 1		 -0.6 0.31 -0.31
39 AT5G06930 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in
313 species: Archae - 2; Bacteria - 910; Metazoa - 754;
Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes -
1219 (source: NCBI BLink).		 -0.6 0.31 -0.31
40 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 -0.6 0.29 -0.32
41 AT4G32030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits
to 59 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.6 0.31 -0.32
42 AT5G12940 Leucine-rich repeat (LRR) family protein -0.6 0.29 -0.32
43 AT5G49310 importin alpha isoform 5 importin alpha isoform 5 -0.6 0.34 -0.31
44 AT1G07380 Neutral/alkaline non-lysosomal ceramidase 0.6 0.31 -0.35
45 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 -0.59 0.29 -0.32
46 AT2G13150 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.59 0.35 -0.3
47 AT1G63930 from the Czech 'roh' meaning 'corner' from the Czech 'roh' meaning
'corner'		 -0.59 0.32 -0.3
48 AT4G33710 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.59 0.31 -0.32
49 AT3G53150 UDP-glucosyl transferase 73D1 UDP-glucosyl transferase 73D1 -0.59 0.33 -0.31
50 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.59 0.31 -0.33
51 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.59 0.32 -0.31
52 AT4G13130 Cysteine/Histidine-rich C1 domain family protein -0.59 0.33 -0.3
53 AT5G19490 Histone superfamily protein -0.59 0.32 -0.31
54 AT1G50930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits
to 213 proteins in 63 species: Archae - 0; Bacteria - 2;
Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other
Eukaryotes - 70 (source: NCBI BLink).		 -0.58 0.3 -0.3
55 AT5G25370 phospholipase D alpha 3 phospholipase D alpha 3 -0.58 0.32 -0.32
56 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.33 -0.31
57 AT5G49110 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN:
cultured cell; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.32 -0.33
58 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.58 0.34 -0.32
59 AT4G12840 Protein of unknown function (DUF707) -0.58 0.29 -0.3
60 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 0.58 0.31 -0.28
61 AT4G14815 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.58 0.31 -0.33
62 AT2G20210 RNI-like superfamily protein -0.57 0.32 -0.32
63 AT4G39400 Leucine-rich receptor-like protein kinase family protein ATBRI1, BR INSENSITIVE 1,
BRASSINOSTEROID INSENSITIVE 1,
CABBAGE 2, DWARF 2		 -0.57 0.32 -0.32
64 AT2G20970 unknown protein; Has 204 Blast hits to 188 proteins in 80
species: Archae - 7; Bacteria - 37; Metazoa - 56; Fungi -
18; Plants - 9; Viruses - 2; Other Eukaryotes - 75 (source:
NCBI BLink).		 -0.57 0.32 -0.3
65 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.57 0.32 -0.32
66 AT5G64710 Putative endonuclease or glycosyl hydrolase -0.57 0.32 -0.32
67 AT4G07890 transposable element gene -0.57 0.32 -0.32
68 AT2G22600 RNA-binding KH domain-containing protein -0.57 0.32 -0.33
69 AT5G24880 BEST Arabidopsis thaliana protein match is:
calmodulin-binding protein-related (TAIR:AT5G10660.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.31 -0.32
70 AT3G27440 uridine kinase-like 5 uridine kinase-like 5 -0.57 0.32 -0.3
71 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 0.56 0.31 -0.33
72 AT2G22810 1-aminocyclopropane-1-carboxylate synthase 4 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID SYNTHASE POLYPEPTIDE,
1-aminocyclopropane-1-carboxylate
synthase 4, ATACS4		 -0.56 0.28 -0.32
73 AT4G08790 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.56 0.32 -0.33
74 AT4G19780 transposable element gene 0.56 0.3 -0.34
75 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.56 0.33 -0.3
76 AT1G75760 ER lumen protein retaining receptor family protein 0.56 0.32 -0.29
77 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.56 0.32 -0.31
78 AT1G33460 transposable element gene -0.56 0.31 -0.32
79 AT5G59040 copper transporter 3 copper transporter 3 0.56 0.32 -0.32
80 AT1G04700 PB1 domain-containing protein tyrosine kinase -0.56 0.3 -0.31
81 AT3G47420 phosphate starvation-induced gene 3 Glycerol-3-phosphate permease 1,
phosphate starvation-induced gene
3, Glycerol-3-phosphate permease
1, phosphate starvation-induced
gene 3		 0.56 0.28 -0.32
82 AT5G52020 Integrase-type DNA-binding superfamily protein -0.56 0.31 -0.31
83 AT1G52920 G protein coupled receptor G-PROTEIN COUPLED RECEPTOR 2, G
protein coupled receptor		 0.56 0.32 -0.3
84 AT3G27270 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.55 0.33 -0.32
85 AT1G11000 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 4,
MILDEW RESISTANCE LOCUS O 4		 -0.55 0.33 -0.32
86 AT4G19680 iron regulated transporter 2 IRON REGULATED TRANSPORTER 2, iron
regulated transporter 2		 -0.55 0.31 -0.33
87 AT4G19670 RING/U-box superfamily protein 0.55 0.32 -0.3
88 AT5G61250 glucuronidase 1 glucuronidase 1, glucuronidase 1 0.55 0.34 -0.3
89 AT4G31020 alpha/beta-Hydrolases superfamily protein -0.55 0.35 -0.3
90 AT4G28560 ROP-interactive CRIB motif-containing protein 7 ROP-interactive CRIB
motif-containing protein 7		 -0.55 0.32 -0.34
91 AT1G16150 wall associated kinase-like 4 wall associated kinase-like 4 -0.55 0.31 -0.33
92 AT5G53550 YELLOW STRIPE like 3 YELLOW STRIPE LIKE 3, YELLOW
STRIPE like 3		 0.55 0.31 -0.31
93 AT2G46860 pyrophosphorylase 3 pyrophosphorylase 3,
pyrophosphorylase 3		 -0.55 0.31 -0.31
94 AT1G70060 SIN3-like 4 SIN3-like 4 -0.55 0.32 -0.32
95 AT4G01575 serine protease inhibitor, Kazal-type family protein -0.54 0.31 -0.31
96 AT5G45750 RAB GTPase homolog A1C RAB GTPase homolog A1C, RAB GTPase
homolog A1C		 -0.54 0.31 -0.3
97 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.54 0.32 -0.3
98 AT1G66450 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.3
99 AT2G44710 RNA-binding (RRM/RBD/RNP motifs) family protein 0.54 0.31 -0.31
100 AT1G69040 ACT domain repeat 4 ACT domain repeat 4 -0.54 0.31 -0.31
101 AT1G26310 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 10, CAULIFLOWER, CAL1 -0.54 0.32 -0.34
102 AT1G35530 DEAD/DEAH box RNA helicase family protein -0.54 0.32 -0.34
103 AT1G17600 Disease resistance protein (TIR-NBS-LRR class) family 0.54 0.31 -0.33
104 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 -0.54 0.33 -0.3
105 AT1G18970 germin-like protein 4 germin-like protein 4 -0.54 0.3 -0.33
106 AT5G55900 Sucrase/ferredoxin-like family protein 0.53 0.34 -0.28
107 AT1G07705 NOT2 / NOT3 / NOT5 family 0.53 0.33 -0.32
108 AT1G69720 heme oxygenase 3 heme oxygenase 3 0.53 0.32 -0.32
109 AT2G26880 AGAMOUS-like 41 AGAMOUS-like 41 0.53 0.3 -0.3
110 AT2G39170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function NEP (InterPro:IPR019320); Has 57 Blast
hits to 57 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.53 0.31 -0.32
111 AT5G18840 Major facilitator superfamily protein 0.52 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
112 C0247 Sulfoquinovosyldiacylglycerol-34:3 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.77 0.5 -0.52 C0247
113 C0251 Sulfoquinovosyldiacylglycerol-36:6 - Sulfoquinovosyldiacylglycerol sulfolipid biosynthesis -0.77 0.5 -0.48 C0251
114 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.72 0.49 -0.49 C0199
115 C0110 Guanosine - Guanosine guanosine nucleotides degradation I,
guanine and guanosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage III 		0.71 0.45 -0.46 C0110
116 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.69 0.49 -0.48 C0085
117 C0082 Digalactosyldiacylglycerol-36:3 - Digalactosyldiacylglycerol-36:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.68 0.5 -0.47 C0082
118 C0084 Digalactosyldiacylglycerol-36:5 - Digalactosyldiacylglycerol-36:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.67 0.5 -0.53 C0084