AT2G16960 : -
Query Information
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AGICode AT2G16960
Description ARM repeat superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G16960 ARM repeat superfamily protein 1 0.3 -0.31
2 AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BIM1 0.64 0.36 -0.33
3 AT2G34840 Coatomer epsilon subunit 0.62 0.32 -0.33
4 AT2G20380 Galactose oxidase/kelch repeat superfamily protein 0.62 0.31 -0.33
5 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 0.62 0.31 -0.29
6 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein 0.6 0.31 -0.32
7 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 0.6 0.32 -0.32
8 AT3G44250 cytochrome P450, family 71, subfamily B, polypeptide 38 cytochrome P450, family 71,
subfamily B, polypeptide 38		 -0.57 0.31 -0.32
9 AT2G20190 CLIP-associated protein CLIP-ASSOCIATED PROTEIN,
CLIP-associated protein		 0.57 0.32 -0.31
10 AT1G05030 Major facilitator superfamily protein 0.57 0.32 -0.31
11 AT4G33160 F-box family protein -0.56 0.31 -0.3
12 AT1G53350 Disease resistance protein (CC-NBS-LRR class) family 0.56 0.31 -0.32
13 AT1G64300 Protein kinase family protein 0.56 0.31 -0.32
14 AT3G06433 pseudogene of nodulin MtN3 family protein 0.55 0.31 -0.31
15 AT5G18360 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.34 -0.31
16 AT4G38940 Galactose oxidase/kelch repeat superfamily protein -0.55 0.34 -0.32
17 AT2G41650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.31 -0.33
18 AT5G11910 alpha/beta-Hydrolases superfamily protein 0.54 0.31 -0.32
19 AT5G15480 C2H2-type zinc finger family protein 0.53 0.32 -0.31
20 AT2G04660 anaphase-promoting complex/cyclosome 2 anaphase-promoting
complex/cyclosome 2		 0.53 0.32 -0.32
21 AT5G19200 NAD(P)-binding Rossmann-fold superfamily protein TSC10B 0.53 0.33 -0.31
22 ATMG00890 hypothetical protein ORF106D 0.52 0.31 -0.3
23 AT5G60470 C2H2 and C2HC zinc fingers superfamily protein 0.52 0.32 -0.31
24 AT1G32670 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.52 0.32 -0.31
25 AT4G26340 F-box/RNI-like/FBD-like domains-containing protein 0.52 0.31 -0.32
26 AT1G43770 RING/FYVE/PHD zinc finger superfamily protein 0.51 0.3 -0.31
27 AT1G06070 Basic-leucine zipper (bZIP) transcription factor family
protein		 -0.51 0.31 -0.32
28 AT1G50970 Membrane trafficking VPS53 family protein 0.51 0.32 -0.31
29 AT3G03830 SAUR-like auxin-responsive protein family 0.51 0.3 -0.32
30 AT1G32090 early-responsive to dehydration stress protein (ERD4) -0.5 0.3 -0.32
31 AT3G25600 Calcium-binding EF-hand family protein -0.5 0.33 -0.33
32 AT2G16690 transposable element gene 0.5 0.31 -0.31
33 AT3G49150 F-box/RNI-like superfamily protein -0.49 0.28 -0.31
34 AT5G14900 helicase associated (HA2) domain-containing protein 0.49 0.32 -0.29
35 AT4G11745 Galactose oxidase/kelch repeat superfamily protein 0.49 0.32 -0.32
36 AT5G14380 arabinogalactan protein 6 arabinogalactan protein 6 0.49 0.3 -0.32
37 AT1G61210 Transducin/WD40 repeat-like superfamily protein DWD hypersensitive to ABA 3 0.48 0.31 -0.32
38 AT1G22090 Protein of unknown function (DUF626) embryo defective 2204 0.48 0.3 -0.31
39 AT3G12140 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML1, EMSY-like 1 -0.47 0.32 -0.33
40 AT5G38210 Protein kinase family protein 0.47 0.31 -0.31
41 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 -0.47 0.31 -0.3
42 AT5G35280 transposable element gene -0.47 0.31 -0.31
43 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 -0.46 0.31 -0.32
44 AT2G30480 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.46 0.31 -0.3
45 AT2G32740 galactosyltransferase 13 ARABIDOPSIS GALACTOSYLTRANSFERASE
13, galactosyltransferase 13		 -0.46 0.31 -0.31
46 AT4G08890 transposable element gene -0.44 0.3 -0.31
47 AT5G49190 sucrose synthase 2 ATSUS2, SUCROSE SYNTHASE FROM
ARABIDOPSIS, sucrose synthase 2		 -0.43 0.31 -0.33
48 AT4G15150 glycine-rich protein -0.42 0.33 -0.31
49 AT1G43980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.41 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
50 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.82 0.45 -0.44 C0186
51 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.79 0.44 -0.45 C0261
52 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.78 0.45 -0.41 C0088
53 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine 0.77 0.44 -0.46 C0030
54 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.76 0.44 -0.46 C0087
55 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.75 0.45 -0.41 C0262
56 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.75 0.43 -0.46 C0234
57 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.74 0.41 -0.47 C0099
58 C0006 β-Homothreonine L-β-Homothreonine - - 0.7 0.45 -0.47
59 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III 0.69 0.43 -0.46 C0195
60 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.69 0.42 -0.44
61 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.66 0.45 -0.45 C0027
62 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.65 0.43 -0.45 C0075
63 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.65 0.48 -0.43 C0011
64 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.64 0.41 -0.44 C0091
65 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		0.63 0.45 -0.43 C0015
66 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.63 0.45 -0.43 C0073
67 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.6 0.32 -0.32 C0005
68 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		0.56 0.31 -0.34 C0259
69 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		0.54 0.36 -0.32 C0061
70 C0062 Betain - - - 0.53 0.32 -0.33