ID | C0015 |
Compound name | p-Coumaric acid |
External link | http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=COUMARATE |
Pathway Information | scopoletin biosynthesis, free phenylpropanoid acid biosynthesis, phenylpropanoid biosynthesis, simple coumarins biosynthesis, 4-hydroxybenzoate biosynthesis V, suberin biosynthesis, phenylpropanoid biosynthesis, initial reactions, flavonoid biosynthesis |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G11890 | adenylate cyclases | -0.79 | 0.45 | -0.42 | |||
2 | AT1G49590 | C2H2 and C2HC zinc fingers superfamily protein | -0.78 | 0.47 | -0.45 | |||
3 | AT4G13980 | winged-helix DNA-binding transcription factor family protein |
AT-HSFA5, HEAT SHOCK TRANSCRIPTION FACTOR A5 |
0.78 | 0.47 | -0.43 | ||
4 | AT1G48690 | Auxin-responsive GH3 family protein | -0.76 | 0.41 | -0.46 | |||
5 | AT2G04660 | anaphase-promoting complex/cyclosome 2 | anaphase-promoting complex/cyclosome 2 |
0.76 | 0.46 | -0.47 | ||
6 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
-0.76 | 0.46 | -0.44 | ||
7 | AT5G18360 | Disease resistance protein (TIR-NBS-LRR class) family | 0.75 | 0.45 | -0.46 | |||
8 | AT1G49400 | Nucleic acid-binding, OB-fold-like protein | embryo defective 1129 | -0.74 | 0.48 | -0.46 | ||
9 | AT3G13580 | Ribosomal protein L30/L7 family protein | -0.73 | 0.45 | -0.49 | |||
10 | AT2G13350 | Calcium-dependent lipid-binding (CaLB domain) family protein |
0.73 | 0.45 | -0.44 | |||
11 | AT1G34500 | MBOAT (membrane bound O-acyl transferase) family protein | -0.72 | 0.46 | -0.46 | |||
12 | AT5G55950 | Nucleotide/sugar transporter family protein | 0.72 | 0.45 | -0.42 | |||
13 | AT5G15480 | C2H2-type zinc finger family protein | 0.71 | 0.44 | -0.47 | |||
14 | AT5G46520 | Disease resistance protein (TIR-NBS-LRR class) family | 0.71 | 0.45 | -0.43 | |||
15 | AT3G42900 | transposable element gene | -0.71 | 0.44 | -0.43 | |||
16 | AT5G58700 | phosphatidylinositol-speciwc phospholipase C4 | ATPLC4, phosphatidylinositol-speciwc phospholipase C4 |
0.7 | 0.47 | -0.49 | ||
17 | AT4G25120 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ARABIDOPSIS THALIANA SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2, SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 |
-0.7 | 0.43 | -0.45 | ||
18 | AT5G33340 | Eukaryotic aspartyl protease family protein | CONSTITUTIVE DISEASE RESISTANCE 1 | -0.7 | 0.44 | -0.43 | ||
19 | AT3G14030 | F-box associated ubiquitination effector family protein | 0.7 | 0.46 | -0.47 | |||
20 | AT3G04390 | Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein |
0.7 | 0.45 | -0.46 | |||
21 | AT5G66020 | Phosphoinositide phosphatase family protein | SUPPRESSOR OF ACTIN 1B, SAC DOMAIN-CONTAINING PROTEIN 6, IMPAIRED IN BABA-INDUCED STERILITY 2, SUPPRESSOR OF ACTIN 1B |
0.69 | 0.43 | -0.43 | ||
22 | AT3G50570 | hydroxyproline-rich glycoprotein family protein | -0.69 | 0.47 | -0.44 | |||
23 | AT2G40880 | cystatin A | cystatin A, cystatin A, FL3-27 | 0.69 | 0.47 | -0.45 | ||
24 | AT1G08710 | F-box family protein | -0.69 | 0.46 | -0.43 | |||
25 | AT4G13520 | small acidic protein 1 | small acidic protein 1 | -0.69 | 0.44 | -0.46 | ||
26 | AT3G54010 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
DEI1, PASTICCINO 1 | 0.69 | 0.46 | -0.45 | ||
27 | AT1G36910 | transposable element gene | -0.68 | 0.45 | -0.46 | |||
28 | AT5G58380 | SOS3-interacting protein 1 | CBL-INTERACTING PROTEIN KINASE 10, PKS2, SOS3-interacting protein 1, SNF1-RELATED PROTEIN KINASE 3.8 |
0.68 | 0.47 | -0.51 | ||
29 | AT3G10600 | cationic amino acid transporter 7 | cationic amino acid transporter 7 | -0.68 | 0.44 | -0.44 | ||
30 | AT5G61880 | Protein Transporter, Pam16 | -0.68 | 0.48 | -0.43 | |||
31 | AT3G47620 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 | TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14, TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 |
0.68 | 0.45 | -0.48 | ||
32 | AT5G61260 | Plant calmodulin-binding protein-related | -0.68 | 0.44 | -0.44 | |||
33 | AT2G37820 | Cysteine/Histidine-rich C1 domain family protein | -0.68 | 0.46 | -0.48 | |||
34 | AT3G43630 | Vacuolar iron transporter (VIT) family protein | -0.68 | 0.44 | -0.41 | |||
35 | AT3G04230 | Ribosomal protein S5 domain 2-like superfamily protein | -0.67 | 0.41 | -0.45 | |||
36 | AT4G11330 | MAP kinase 5 | MAP kinase 5, MAP kinase 5 | 0.67 | 0.45 | -0.49 | ||
37 | AT2G13890 | transposable element gene | 0.67 | 0.46 | -0.48 | |||
38 | AT1G76020 | Thioredoxin superfamily protein | 0.67 | 0.45 | -0.43 | |||
39 | AT1G36020 | BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT1G35530.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.44 | -0.47 | |||
40 | AT3G10990 | F-box associated ubiquitination effector family protein | 0.67 | 0.45 | -0.47 | |||
41 | AT1G53980 | Ubiquitin-like superfamily protein | 0.67 | 0.45 | -0.43 | |||
42 | AT5G42570 | B-cell receptor-associated 31-like | 0.67 | 0.47 | -0.47 | |||
43 | AT4G07540 | transposable element gene | 0.67 | 0.43 | -0.46 | |||
44 | AT3G17430 | Nucleotide-sugar transporter family protein | -0.67 | 0.45 | -0.44 | |||
45 | AT4G31970 | cytochrome P450, family 82, subfamily C, polypeptide 2 | cytochrome P450, family 82, subfamily C, polypeptide 2 |
0.67 | 0.46 | -0.44 | ||
46 | AT1G79330 | metacaspase 5 | AMC6, metacaspase 5, metacaspase 2b, metacaspase 5, metacaspase 2b |
0.67 | 0.45 | -0.44 | ||
47 | AT5G60470 | C2H2 and C2HC zinc fingers superfamily protein | 0.66 | 0.43 | -0.46 | |||
48 | AT3G26730 | RING/U-box superfamily protein | 0.66 | 0.43 | -0.45 | |||
49 | AT2G10950 | BSD domain-containing protein | 0.66 | 0.45 | -0.46 | |||
50 | AT5G20800 | transposable element gene | 0.66 | 0.43 | -0.44 | |||
51 | AT1G10000 | Ribonuclease H-like superfamily protein | 0.66 | 0.44 | -0.45 | |||
52 | AT5G53480 | ARM repeat superfamily protein | -0.66 | 0.46 | -0.47 | |||
53 | AT3G21650 | Protein phosphatase 2A regulatory B subunit family protein | 0.66 | 0.44 | -0.44 | |||
54 | AT4G39200 | Ribosomal protein S25 family protein | -0.66 | 0.44 | -0.45 | |||
55 | AT3G05320 | O-fucosyltransferase family protein | -0.66 | 0.5 | -0.44 | |||
56 | AT5G24280 | gamma-irradiation and mitomycin c induced 1 | GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 |
-0.66 | 0.44 | -0.44 | ||
57 | AT5G19200 | NAD(P)-binding Rossmann-fold superfamily protein | TSC10B | 0.66 | 0.43 | -0.45 | ||
58 | AT2G23120 | Late embryogenesis abundant protein, group 6 | 0.66 | 0.46 | -0.47 | |||
59 | AT1G32810 | RING/FYVE/PHD zinc finger superfamily protein | 0.66 | 0.45 | -0.47 | |||
60 | AT3G03110 | exportin 1B | CRM1B, exportin 1B | -0.65 | 0.43 | -0.47 | ||
61 | AT1G72090 | Methylthiotransferase | -0.65 | 0.46 | -0.45 | |||
62 | AT1G31440 | SH3 domain-containing protein | 0.65 | 0.45 | -0.43 | |||
63 | AT3G29810 | COBRA-like protein 2 precursor | COBRA-like protein 2 precursor | -0.65 | 0.44 | -0.43 | ||
64 | AT1G71770 | poly(A)-binding protein 5 | poly(A)-binding protein 5 | -0.65 | 0.47 | -0.45 | ||
65 | AT1G75370 | Sec14p-like phosphatidylinositol transfer family protein | 0.65 | 0.46 | -0.48 | |||
66 | AT1G55810 | uridine kinase-like 3 | uridine kinase-like 3 | -0.65 | 0.48 | -0.44 | ||
67 | AT3G60880 | dihydrodipicolinate synthase 1 | DIHYDRODIPICOLINATE SYNTHASE, dihydrodipicolinate synthase 1 |
-0.65 | 0.48 | -0.45 | ||
68 | AT4G38940 | Galactose oxidase/kelch repeat superfamily protein | -0.65 | 0.43 | -0.47 | |||
69 | AT1G09510 | NAD(P)-binding Rossmann-fold superfamily protein | 0.65 | 0.45 | -0.44 | |||
70 | AT2G23860 | pseudogene, similar to VAP27, blastp match of 56% identity and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365 VAP27 {Nicotiana plumbaginifolia} |
0.65 | 0.44 | -0.44 | |||
71 | AT5G43150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.65 | 0.42 | -0.42 | |||
72 | AT1G05170 | Galactosyltransferase family protein | 0.65 | 0.46 | -0.42 | |||
73 | AT5G55160 | small ubiquitin-like modifier 2 | ATSUMO2, SMALL UBIQUITIN-LIKE MODIFIER 2, SMALL UBIQUITIN-LIKE MODIFIER 2, small ubiquitin-like modifier 2 |
-0.65 | 0.43 | -0.46 | ||
74 | AT1G22710 | sucrose-proton symporter 2 | ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 2, sucrose-proton symporter 2, SUCROSE TRANSPORTER 1 |
0.65 | 0.41 | -0.4 | ||
75 | AT3G19780 | LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.64 | 0.42 | -0.44 | |||
76 | AT1G67990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
TAPETUM-SPECIFIC METHYLTRANSFERASE 1, TSM1 |
0.64 | 0.46 | -0.44 | ||
77 | AT5G55500 | beta-1,2-xylosyltransferase | ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE, beta-1,2-xylosyltransferase |
-0.64 | 0.43 | -0.42 | ||
78 | AT3G08960 | ARM repeat superfamily protein | -0.64 | 0.44 | -0.41 | |||
79 | AT3G42550 | Eukaryotic aspartyl protease family protein | 0.64 | 0.44 | -0.45 | |||
80 | AT1G48100 | Pectin lyase-like superfamily protein | 0.64 | 0.46 | -0.47 | |||
81 | AT2G31740 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.64 | 0.41 | -0.46 | |||
82 | AT1G32880 | ARM repeat superfamily protein | -0.64 | 0.44 | -0.44 | |||
83 | AT4G01550 | NAC domain containing protein 69 | NAC domain containing protein 69, NAC domain containing protein 69, NAC with Transmembrane Motif 2 |
0.64 | 0.48 | -0.48 | ||
84 | AT3G53200 | myb domain protein 27 | myb domain protein 27, myb domain protein 27 |
-0.64 | 0.5 | -0.47 | ||
85 | AT1G21950 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21940.1); Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.45 | -0.43 | |||
86 | AT1G34190 | NAC domain containing protein 17 | NAC domain containing protein 17, NAC domain containing protein 17 |
0.64 | 0.44 | -0.43 | ||
87 | AT5G41580 | RING/U-box superfamily protein | 0.64 | 0.46 | -0.46 | |||
88 | AT2G29580 | CCCH-type zinc fingerfamily protein with RNA-binding domain | MOS4-associated complex subunit 5B | 0.64 | 0.43 | -0.43 | ||
89 | AT1G24600 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.64 | 0.44 | -0.46 | |||
90 | AT5G35600 | histone deacetylase7 | histone deacetylase7 | -0.63 | 0.45 | -0.42 | ||
91 | AT3G31380 | transposable element gene | 0.63 | 0.45 | -0.45 | |||
92 | AT1G43770 | RING/FYVE/PHD zinc finger superfamily protein | 0.63 | 0.45 | -0.44 | |||
93 | AT4G08890 | transposable element gene | -0.63 | 0.47 | -0.44 | |||
94 | AT1G68840 | related to ABI3/VP1 2 | AtRAV2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RELATED TO AP2 8, related to ABI3/VP1 2, TEMPRANILLO 2 |
-0.63 | 0.47 | -0.46 | ||
95 | AT3G56260 | unknown protein; Has 20 Blast hits to 19 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 10; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.63 | 0.46 | -0.42 | |||
96 | AT1G10090 | Early-responsive to dehydration stress protein (ERD4) | 0.63 | 0.42 | -0.43 | |||
97 | AT4G17750 | heat shock factor 1 | ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 1, ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1A, heat shock factor 1, CLASS A HEAT SHOCK FACTOR 1A |
0.63 | 0.43 | -0.47 | ||
98 | AT5G03470 | Protein phosphatase 2A regulatory B subunit family protein | ATB' ALPHA | 0.63 | 0.49 | -0.47 | ||
99 | AT3G22250 | UDP-Glycosyltransferase superfamily protein | 0.63 | 0.45 | -0.45 | |||
100 | AT5G17720 | alpha/beta-Hydrolases superfamily protein | -0.63 | 0.42 | -0.43 | |||
101 | AT2G39360 | Protein kinase superfamily protein | -0.63 | 0.43 | -0.44 | |||
102 | AT2G16960 | ARM repeat superfamily protein | 0.63 | 0.46 | -0.42 | |||
103 | AT3G25160 | ER lumen protein retaining receptor family protein | 0.63 | 0.46 | -0.44 | |||
104 | AT1G51860 | Leucine-rich repeat protein kinase family protein | -0.63 | 0.47 | -0.49 | |||
105 | AT2G30970 | aspartate aminotransferase 1 | aspartate aminotransferase 1 | -0.63 | 0.45 | -0.43 | ||
106 | AT2G26880 | AGAMOUS-like 41 | AGAMOUS-like 41 | 0.63 | 0.42 | -0.44 | ||
107 | AT4G09130 | RING/U-box superfamily protein | -0.63 | 0.44 | -0.45 | |||
108 | AT2G37880 | Protein of unknown function, DUF617 | 0.63 | 0.43 | -0.45 | |||
109 | AT5G40430 | myb domain protein 22 | myb domain protein 22, myb domain protein 22 |
-0.63 | 0.44 | -0.44 | ||
110 | AT3G18300 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits to 69 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.42 | -0.43 | |||
111 | AT4G34840 | Phosphorylase superfamily protein | ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 2, ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 2, METHYLTHIOADENOSINE NUCLEOSIDASE 2, methylthioadenosine nucleosidase 2 |
-0.62 | 0.41 | -0.46 | ||
112 | AT3G01090 | SNF1 kinase homolog 10 | SNF1 kinase homolog 10, KIN10, SNF1 kinase homolog 10, SNF1-RELATED PROTEIN KINASE 1.1 |
0.62 | 0.42 | -0.47 | ||
113 | AT4G30080 | auxin response factor 16 | auxin response factor 16 | 0.62 | 0.48 | -0.49 | ||
114 | AT5G56160 | Sec14p-like phosphatidylinositol transfer family protein | 0.62 | 0.44 | -0.45 | |||
115 | AT1G56710 | Pectin lyase-like superfamily protein | 0.62 | 0.45 | -0.45 | |||
116 | AT3G60420 | Phosphoglycerate mutase family protein | 0.62 | 0.46 | -0.4 | |||
117 | AT3G32960 | Domain of unknown function (DUF1985) | 0.62 | 0.47 | -0.45 | |||
118 | AT5G04420 | Galactose oxidase/kelch repeat superfamily protein | -0.62 | 0.43 | -0.45 | |||
119 | AT3G42920 | transposable element gene | -0.62 | 0.5 | -0.46 | |||
120 | AT1G74160 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). |
0.62 | 0.41 | -0.43 | |||
121 | AT1G07850 | Protein of unknown function (DUF604) | 0.62 | 0.5 | -0.44 | |||
122 | AT5G64850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.62 | 0.43 | -0.44 | |||
123 | AT1G02860 | SPX (SYG1/Pho81/XPR1) domain-containing protein | BENZOIC ACID HYPERSENSITIVE 1, nitrogen limitation adaptation |
-0.62 | 0.47 | -0.49 | ||
124 | AT3G08810 | Galactose oxidase/kelch repeat superfamily protein | -0.62 | 0.43 | -0.47 | |||
125 | AT2G30925 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.42 | -0.46 | |||
126 | AT5G39590 | TLD-domain containing nucleolar protein | 0.62 | 0.46 | -0.44 | |||
127 | AT1G12520 | copper chaperone for SOD1 | copper chaperone for SOD1, copper chaperone for SOD1 |
-0.62 | 0.45 | -0.47 | ||
128 | AT5G10880 | tRNA synthetase-related / tRNA ligase-related | 0.62 | 0.44 | -0.46 | |||
129 | ATMG00070 | NADH dehydrogenase subunit 9 | NADH dehydrogenase subunit 9 | -0.62 | 0.41 | -0.44 | ||
130 | AT1G23330 | alpha/beta-Hydrolases superfamily protein | 0.62 | 0.44 | -0.47 | |||
131 | AT4G03340 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.62 | 0.45 | -0.47 | |||
132 | AT5G04110 | DNA GYRASE B3 | DNA GYRASE B3 | 0.62 | 0.46 | -0.44 | ||
133 | AT5G61310 | Cytochrome c oxidase subunit Vc family protein | -0.61 | 0.45 | -0.45 | |||
134 | AT1G17960 | Threonyl-tRNA synthetase | -0.61 | 0.45 | -0.48 | |||
135 | AT1G33080 | MATE efflux family protein | -0.61 | 0.45 | -0.43 | |||
136 | AT5G53880 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.49 | -0.47 | |||
137 | AT1G05410 | Protein of unknown function (DUF1423) | -0.61 | 0.43 | -0.43 | |||
138 | AT4G32030 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
-0.61 | 0.44 | -0.43 | |||
139 | AT5G05890 | UDP-Glycosyltransferase superfamily protein | -0.61 | 0.43 | -0.44 | |||
140 | AT3G04605 | transposable element gene | -0.61 | 0.45 | -0.45 | |||
141 | AT2G31110 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 40 | -0.61 | 0.44 | -0.46 | ||
142 | AT2G06640 | transposable element gene | -0.61 | 0.47 | -0.45 | |||
143 | AT3G46530 | NB-ARC domain-containing disease resistance protein | RECOGNITION OF PERONOSPORA PARASITICA 13 |
-0.61 | 0.45 | -0.47 | ||
144 | AT3G26810 | auxin signaling F-box 2 | auxin signaling F-box 2 | -0.6 | 0.44 | -0.41 | ||
145 | AT1G06970 | cation/hydrogen exchanger 14 | ATCHX14, cation/hydrogen exchanger 14 |
-0.6 | 0.44 | -0.45 | ||
146 | AT5G37660 | plasmodesmata-located protein 7 | plasmodesmata-located protein 7 | -0.6 | 0.46 | -0.45 | ||
147 | AT1G11040 | HSP40/DnaJ peptide-binding protein | -0.6 | 0.45 | -0.45 | |||
148 | AT4G01340 | CHP-rich zinc finger protein-related | -0.6 | 0.42 | -0.45 | |||
149 | ATMG00670 | hypothetical protein | ORF275 | -0.6 | 0.44 | -0.47 | ||
150 | AT1G60995 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). |
-0.6 | 0.43 | -0.44 | |||
151 | AT2G19410 | U-box domain-containing protein kinase family protein | -0.6 | 0.45 | -0.44 | |||
152 | AT4G04280 | transposable element gene | -0.6 | 0.44 | -0.43 | |||
153 | AT3G43840 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | -0.6 | 0.45 | -0.44 | |||
154 | AT4G26150 | cytokinin-responsive gata factor 1 | cytokinin-responsive gata factor 1, GATA TRANSCRIPTION FACTOR 22, GNC-LIKE |
-0.6 | 0.45 | -0.46 | ||
155 | AT3G27325 | hydrolases, acting on ester bonds | -0.6 | 0.45 | -0.44 | |||
156 | AT5G45180 | Flavin-binding monooxygenase family protein | -0.59 | 0.39 | -0.46 | |||
157 | AT3G19460 | Reticulon family protein | -0.59 | 0.46 | -0.47 | |||
158 | AT2G40010 | Ribosomal protein L10 family protein | -0.59 | 0.42 | -0.44 | |||
159 | AT4G12860 | EF hand calcium-binding protein family | unfertilized embryo sac 14 | -0.59 | 0.45 | -0.45 | ||
160 | AT1G15250 | Zinc-binding ribosomal protein family protein | -0.59 | 0.41 | -0.42 | |||
161 | AT1G67490 | glucosidase 1 | glucosidase 1, KNOPF | -0.59 | 0.45 | -0.47 | ||
162 | AT4G07430 | transposable element gene | -0.59 | 0.45 | -0.45 | |||
163 | AT4G19510 | Disease resistance protein (TIR-NBS-LRR class) | -0.59 | 0.46 | -0.45 | |||
164 | AT1G21190 | Small nuclear ribonucleoprotein family protein | -0.59 | 0.42 | -0.43 | |||
165 | AT5G53480 | ARM repeat superfamily protein | -0.59 | 0.44 | -0.44 | |||
166 | AT2G04070 | MATE efflux family protein | -0.59 | 0.44 | -0.42 | |||
167 | AT3G21430 | DNA binding | ALWAYS EARLY 3, ARABIDOPSIS THALIANA ALWAYS EARLY 3 |
-0.59 | 0.47 | -0.5 | ||
168 | AT4G18593 | dual specificity protein phosphatase-related | -0.58 | 0.49 | -0.49 | |||
169 | AT5G57000 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
-0.58 | 0.45 | -0.41 | |||
170 | AT2G19800 | myo-inositol oxygenase 2 | myo-inositol oxygenase 2 | -0.58 | 0.48 | -0.44 | ||
171 | AT3G08910 | DNAJ heat shock family protein | -0.58 | 0.46 | -0.47 | |||
172 | AT2G31110 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 40 | -0.58 | 0.42 | -0.45 | ||
173 | AT2G32560 | F-box family protein | -0.58 | 0.48 | -0.45 | |||
174 | AT4G10260 | pfkB-like carbohydrate kinase family protein | -0.58 | 0.47 | -0.43 | |||
175 | AT1G51540 | Galactose oxidase/kelch repeat superfamily protein | -0.58 | 0.47 | -0.46 | |||
176 | AT2G39500 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.44 | -0.43 | |||
177 | AT4G34215 | Domain of unknown function (DUF303) | -0.58 | 0.48 | -0.46 | |||
178 | AT2G19660 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.42 | -0.47 | |||
179 | AT1G10950 | transmembrane nine 1 | AtTMN1, transmembrane nine 1 | -0.58 | 0.46 | -0.43 | ||
180 | AT3G42360 | transposable element gene | -0.58 | 0.45 | -0.47 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
181 | C0015 | p-Coumaric acid | - | 4-Coumarate | scopoletin biosynthesis, free phenylpropanoid acid biosynthesis, phenylpropanoid biosynthesis, simple coumarins biosynthesis, 4-hydroxybenzoate biosynthesis V, suberin biosynthesis, phenylpropanoid biosynthesis, initial reactions, flavonoid biosynthesis |
1 | 0.43 | -0.42 | ||
182 | C0216 | Proline | L-Proline | L-Proline | proline degradation II, arginine degradation VI (arginase 2 pathway), L-Ndelta-acetylornithine biosynthesis, tRNA charging, citrulline biosynthesis, proline biosynthesis III |
0.9 | 0.45 | -0.42 | ||
183 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
0.83 | 0.43 | -0.43 | ||
184 | C0057 | Anthranilic acid | - | Anthranilate | tryptophan biosynthesis, benzoylanthranilate biosynthesis |
0.79 | 0.45 | -0.46 | ||
185 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
0.78 | 0.47 | -0.44 | ||
186 | C0061 | Aspartic acid | L-Aspartic acid | L-Aspartate | purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging, indole-3-acetyl-amino acid biosynthesis, citrulline-nitric oxide cycle, asparagine degradation I, cyanide detoxification II, asparagine biosynthesis I, asparagine biosynthesis III (tRNA-dependent), arginine biosynthesis I, inosine-5'-phosphate biosynthesis II, uridine-5'-phosphate biosynthesis, aspartate biosynthesis, homoserine biosynthesis, lysine biosynthesis VI, aspartate degradation II, urea cycle, purine nucleotides de novo biosynthesis II, NAD biosynthesis I (from aspartate), IAA degradation IV, arginine biosynthesis II (acetyl cycle) |
0.76 | 0.46 | -0.44 | ||
187 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.76 | 0.44 | -0.45 | ||
188 | C0094 | Galactosamine | D-Galactosamine | - | - | 0.76 | 0.44 | -0.44 | ||
189 | C0005 | β-Fructose-6-phosphate | β-D-Fructose-6-phosphate | D-Fructose-6-phosphate | starch biosynthesis, Rubisco shunt, Calvin-Benson-Bassham cycle, mannitol degradation II, ascorbate biosynthesis I (L-galactose pathway), UDP-N-acetyl-D-glucosamine biosynthesis II, GDP-mannose biosynthesis, mannose degradation, sucrose biosynthesis I, sucrose degradation III, glycolysis IV (plant cytosol), pentose phosphate pathway (non-oxidative branch), glycolysis I, superpathway of sucrose and starch metabolism II (photosynthetic tissue), D-mannose degradation, gluconeogenesis I |
0.75 | 0.44 | -0.46 | ||
190 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.75 | 0.46 | -0.44 | ||
191 | C0259 | Tyramine | - | Tyramine | hydroxycinnamic acid tyramine amides biosynthesis, suberin biosynthesis |
0.74 | 0.46 | -0.46 | ||
192 | C0062 | Betain | - | - | - | 0.74 | 0.42 | -0.44 | ||
193 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.73 | 0.45 | -0.47 | ||
194 | C0113 | Histidinol | - | Histidinol | histidine biosynthesis | 0.73 | 0.42 | -0.45 | ||
195 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.73 | 0.45 | -0.43 | ||
196 | C0069 | Citrulline | - | Citrulline | citrulline-nitric oxide cycle, citrulline biosynthesis, nitric oxide biosynthesis I (in plants), urea cycle, citrulline degradation, arginine biosynthesis II (acetyl cycle), arginine biosynthesis I |
0.71 | 0.45 | -0.47 | ||
197 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.7 | 0.43 | -0.45 | ||
198 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | 0.69 | 0.45 | -0.42 | ||
199 | C0013 | N2-Acetyl-Ornithine | N2-Acetyl-L-ornithine | N-acetyl-L-ornithine | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.69 | 0.46 | -0.46 | ||
200 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
0.68 | 0.43 | -0.43 | ||
201 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.68 | 0.42 | -0.46 | ||
202 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.68 | 0.46 | -0.47 | ||
203 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
0.68 | 0.43 | -0.46 | ||
204 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.68 | 0.43 | -0.44 | ||
205 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.67 | 0.45 | -0.44 | ||
206 | C0112 | Histidine | L-Histidine | L-Histidine | tRNA charging, histidine biosynthesis |
0.67 | 0.46 | -0.44 | ||
207 | C0058 | Arginine | D,L-Arginine | L-Arginine | arginine degradation VI (arginase 2 pathway), arginine degradation I (arginase pathway), arginine biosynthesis I, putrescine biosynthesis II, nitric oxide biosynthesis I (in plants), citrulline biosynthesis, putrescine biosynthesis I, tRNA charging, arginine biosynthesis II (acetyl cycle), citrulline-nitric oxide cycle, urea cycle, L-Ndelta-acetylornithine biosynthesis |
0.65 | 0.45 | -0.44 | ||
208 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
0.64 | 0.45 | -0.46 | ||
209 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
0.63 | 0.46 | -0.44 |