AT4G16900 : -
Query Information
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AGICode AT4G16900
Description Disease resistance protein (TIR-NBS-LRR class) family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G16900 Disease resistance protein (TIR-NBS-LRR class) family 1 0.29 -0.31
2 AT3G51310 VPS35 homolog C VPS35 homolog C 0.72 0.31 -0.31
3 AT2G34840 Coatomer epsilon subunit 0.71 0.3 -0.3
4 AT5G06670 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.3 -0.32
5 AT5G34790 transposable element gene -0.64 0.31 -0.32
6 AT5G03770 KDO transferase A AtKdtA, KDO transferase A 0.64 0.3 -0.34
7 AT3G52030 F-box family protein with WD40/YVTN repeat doamin 0.63 0.31 -0.3
8 AT3G12820 myb domain protein 10 myb domain protein 10, myb domain
protein 10		 -0.63 0.33 -0.31
9 AT1G23210 glycosyl hydrolase 9B6 glycosyl hydrolase 9B6, glycosyl
hydrolase 9B6		 -0.63 0.3 -0.31
10 AT4G19500 nucleoside-triphosphatases;transmembrane
receptors;nucleotide binding;ATP binding		 0.62 0.33 -0.3
11 AT2G46560 transducin family protein / WD-40 repeat family protein 0.62 0.32 -0.32
12 AT5G62330 BEST Arabidopsis thaliana protein match is: Plant
invertase/pectin methylesterase inhibitor superfamily
protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins
in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.33
13 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 0.61 0.3 -0.32
14 AT4G32120 Galactosyltransferase family protein -0.61 0.31 -0.32
15 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30		 -0.61 0.31 -0.31
16 AT4G15030 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site
protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits
to 5700 proteins in 376 species: Archae - 6; Bacteria -
264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses -
76; Other Eukaryotes - 2900 (source: NCBI BLink).		 0.61 0.33 -0.31
17 AT5G14670 ADP-ribosylation factor A1B ADP-ribosylation factor A1B,
ADP-ribosylation factor A1B		 -0.6 0.3 -0.31
18 AT3G43420 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.31
19 AT4G35710 Arabidopsis protein of unknown function (DUF241) 0.6 0.32 -0.34
20 AT4G37630 cyclin d5;1 cyclin d5;1 -0.6 0.34 -0.31
21 AT5G51580 unknown protein; Has 8 Blast hits to 6 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 -0.59 0.31 -0.32
22 AT2G25650 DNA-binding storekeeper protein-related transcriptional
regulator		 0.59 0.32 -0.31
23 AT5G03510 C2H2-type zinc finger family protein -0.59 0.3 -0.33
24 AT5G37660 plasmodesmata-located protein 7 plasmodesmata-located protein 7 -0.59 0.33 -0.32
25 AT5G55370 MBOAT (membrane bound O-acyl transferase) family protein -0.58 0.33 -0.33
26 AT5G02910 F-box/RNI-like superfamily protein -0.58 0.34 -0.29
27 AT2G47310 flowering time control protein-related / FCA gamma-related 0.58 0.3 -0.32
28 AT2G07760 Zinc knuckle (CCHC-type) family protein -0.58 0.32 -0.31
29 AT2G16810 F-box and associated interaction domains-containing protein -0.58 0.3 -0.33
30 AT5G40250 RING/U-box superfamily protein -0.57 0.32 -0.31
31 AT5G45690 Protein of unknown function (DUF1264) 0.57 0.33 -0.31
32 AT3G44950 glycine-rich protein 0.57 0.34 -0.32
33 AT3G43020 transposable element gene -0.57 0.31 -0.3
34 AT5G64110 Peroxidase superfamily protein 0.57 0.31 -0.33
35 AT3G04410 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.56 0.32 -0.34
36 AT5G49630 amino acid permease 6 amino acid permease 6 -0.56 0.33 -0.31
37 AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 9,
nine-cis-epoxycarotenoid
dioxygenase 9		 -0.56 0.31 -0.32
38 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.31 -0.3
39 AT1G55590 RNI-like superfamily protein 0.55 0.3 -0.3
40 AT3G45940 Glycosyl hydrolases family 31 protein -0.55 0.32 -0.33
41 AT1G78700 BES1/BZR1 homolog 4 BES1/BZR1 homolog 4 -0.55 0.32 -0.3
42 AT5G47810 phosphofructokinase 2 phosphofructokinase 2 0.55 0.32 -0.32
43 AT2G13100 Major facilitator superfamily protein glycerol-3-phosphate permease 5,
glycerol-3-phosphate permease 5		 0.55 0.33 -0.3
44 AT1G20500 AMP-dependent synthetase and ligase family protein -0.54 0.32 -0.33
45 AT2G42180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.54 0.31 -0.31
46 AT3G48710 DEK domain-containing chromatin associated protein 0.54 0.33 -0.32
47 AT5G11820 Plant self-incompatibility protein S1 family 0.54 0.32 -0.31
48 AT1G74400 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.31 -0.32
49 ATMG00470 hypothetical protein ORF122A 0.53 0.31 -0.3
50 AT4G01575 serine protease inhibitor, Kazal-type family protein -0.53 0.33 -0.31
51 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.53 0.3 -0.32
52 AT1G36810 transposable element gene 0.53 0.33 -0.32
53 AT3G29260 NAD(P)-binding Rossmann-fold superfamily protein 0.53 0.33 -0.32
54 AT2G37780 Cysteine/Histidine-rich C1 domain family protein -0.53 0.31 -0.32
55 AT5G59990 CCT motif family protein -0.53 0.32 -0.31
56 AT3G31430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast
hits to 291 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.3 -0.33
57 AT3G06290 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3B, yeast Sac3 homolog B 0.53 0.31 -0.31
58 AT2G34960 cationic amino acid transporter 5 cationic amino acid transporter 5 -0.52 0.36 -0.34
59 AT3G32160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43150.1); Has 28 Blast hits
to 28 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.32
60 AT3G46770 AP2/B3-like transcriptional factor family protein -0.52 0.32 -0.32
61 AT2G02270 pseudogene, F-box protein (SKP1 interacting partner
3-related), contains similarity to SKP1 interacting partner
3 GI:10716951 from (Arabidopsis thaliana); blastp match of
37% identity and 4.7e-33 P-value to
GP|28812128|dbj|BAC64996.1||AP004461 P0443G08.20 {Oryza
sativa (japonica cultivar-group)}		 ATPP2-B3 0.52 0.32 -0.31
62 AT5G35150 transposable element gene -0.52 0.32 -0.3
63 AT5G35260 transposable element gene 0.52 0.33 -0.31
64 AT1G22080 Cysteine proteinases superfamily protein 0.52 0.32 -0.31
65 AT2G18590 Major facilitator superfamily protein 0.52 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
66 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.73 0.46 -0.46 C0099
67 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.68 0.42 -0.46 C0186
68 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.66 0.44 -0.43 C0053
69 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.61 0.33 -0.3 C0005