AT5G22720 : -
Query Information
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AGICode AT5G22720
Description F-box/RNI-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G22720 F-box/RNI-like superfamily protein 1 0.31 -0.32
2 AT1G54240 winged-helix DNA-binding transcription factor family
protein		 -0.76 0.29 -0.32
3 AT3G45420 Concanavalin A-like lectin protein kinase family protein 0.74 0.32 -0.33
4 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein 0.74 0.32 -0.33
5 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF 0.73 0.32 -0.31
6 AT5G35170 adenylate kinase family protein 0.71 0.33 -0.32
7 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 0.71 0.33 -0.3
8 AT4G03205 Coproporphyrinogen III oxidase hemf2 0.69 0.3 -0.32
9 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.69 0.33 -0.32
10 AT5G38140 nuclear factor Y, subunit C12 nuclear factor Y, subunit C12 0.68 0.34 -0.31
11 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.67 0.31 -0.32
12 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 0.67 0.34 -0.31
13 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.32 -0.31
14 AT3G46580 methyl-CPG-binding domain protein 5 ATMBD5, METHYL-CPG-BINDING DOMAIN
PROTEIN 05, methyl-CPG-binding
domain protein 5		 0.64 0.3 -0.3
15 AT2G35910 RING/U-box superfamily protein -0.64 0.33 -0.32
16 AT5G46400 Tetratricopeptide repeat (TPR)-like superfamily protein AT PRP39-2, PRP39-2 0.63 0.33 -0.3
17 AT1G03910 EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein,
cactus-binding domain, C-terminal (InterPro:IPR019134),
Cactin, central region (InterPro:IPR018816); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins
in 452 species: Archae - 31; Bacteria - 352; Metazoa -
6006; Fungi - 1138; Plants - 599; Viruses - 33; Other
Eukaryotes - 3552 (source: NCBI BLink).		 0.63 0.31 -0.32
18 AT1G79820 Major facilitator superfamily protein SUPPRESSOR OF G PROTEIN BETA1 0.63 0.33 -0.31
19 AT5G55300 DNA topoisomerase I alpha MGOUN 1, TOPOISOMERASE 1, DNA
topoisomerase I alpha		 0.63 0.31 -0.3
20 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B		 0.62 0.29 -0.31
21 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.62 0.34 -0.33
22 AT3G28200 Peroxidase superfamily protein -0.62 0.34 -0.33
23 AT1G48870 Transducin/WD40 repeat-like superfamily protein 0.62 0.3 -0.33
24 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 0.62 0.31 -0.32
25 AT2G36040 transposable element gene 0.61 0.32 -0.33
26 AT5G60070 ankyrin repeat family protein 0.61 0.33 -0.32
27 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.61 0.31 -0.33
28 AT3G26560 ATP-dependent RNA helicase, putative 0.6 0.3 -0.32
29 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 0.6 0.32 -0.32
30 AT3G58080 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.29 -0.3
31 AT2G21490 dehydrin LEA dehydrin LEA 0.6 0.32 -0.31
32 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 0.6 0.34 -0.32
33 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein 0.6 0.31 -0.33
34 AT1G61500 S-locus lectin protein kinase family protein 0.59 0.3 -0.33
35 AT1G28160 Integrase-type DNA-binding superfamily protein -0.59 0.32 -0.31
36 AT2G20460 transposable element gene 0.59 0.31 -0.32
37 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein 0.59 0.32 -0.3
38 AT4G05370 BCS1 AAA-type ATPase -0.59 0.34 -0.32
39 AT3G47660 Regulator of chromosome condensation (RCC1) family protein -0.59 0.32 -0.3
40 AT3G54060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37960.2); Has 455 Blast hits
to 322 proteins in 98 species: Archae - 0; Bacteria - 178;
Metazoa - 88; Fungi - 75; Plants - 28; Viruses - 2; Other
Eukaryotes - 84 (source: NCBI BLink).		 0.59 0.31 -0.31
41 AT2G23860 pseudogene, similar to VAP27, blastp match of 56% identity
and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365
VAP27 {Nicotiana plumbaginifolia}		 0.59 0.3 -0.3
42 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 -0.59 0.31 -0.3
43 AT3G20990 transposable element gene -0.58 0.3 -0.31
44 AT1G27960 evolutionarily conserved C-terminal region 9 evolutionarily conserved
C-terminal region 9		 0.58 0.28 -0.32
45 AT3G32060 transposable element gene -0.58 0.32 -0.32
46 AT5G49555 FAD/NAD(P)-binding oxidoreductase family protein 0.58 0.3 -0.31
47 AT1G74620 RING/U-box superfamily protein 0.57 0.31 -0.31
48 AT3G14090 exocyst subunit exo70 family protein D3 exocyst subunit exo70 family
protein D3, exocyst subunit exo70
family protein D3		 -0.57 0.32 -0.3
49 AT1G22860 Vacuolar sorting protein 39 0.57 0.32 -0.3
50 AT2G14380 transposable element gene -0.57 0.3 -0.32
51 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein -0.57 0.32 -0.33
52 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 -0.57 0.32 -0.29
53 AT1G23830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.32 -0.33
54 AT4G18400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.3 -0.3
55 AT1G21430 Flavin-binding monooxygenase family protein YUC11 0.56 0.3 -0.32
56 AT2G18640 geranylgeranyl pyrophosphate synthase 4 geranylgeranyl pyrophosphate
synthase 4		 -0.56 0.32 -0.34
57 AT3G29220 transposable element gene 0.56 0.33 -0.32
58 AT1G49400 Nucleic acid-binding, OB-fold-like protein embryo defective 1129 -0.56 0.31 -0.31
59 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 0.56 0.31 -0.29
60 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 0.56 0.31 -0.33
61 AT2G40790 C-terminal cysteine residue is changed to a serine 2 C-terminal cysteine residue is
changed to a serine 2, C-terminal
cysteine residue is changed to a
serine 2		 -0.55 0.3 -0.32
62 AT3G22700 F-box and associated interaction domains-containing protein -0.55 0.31 -0.32
63 AT3G62190 Chaperone DnaJ-domain superfamily protein 0.55 0.32 -0.31
64 AT3G28030 5'-3' exonuclease family protein ULTRAVIOLET HYPERSENSITIVE 3, UV
REPAIR DEFECTIVE 1		 0.55 0.32 -0.31
65 AT4G33390 Plant protein of unknown function (DUF827) -0.55 0.33 -0.31
66 AT5G62960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G10660.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.55 0.34 -0.33
67 AT3G42730 transposable element gene -0.55 0.32 -0.3
68 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 0.55 0.32 -0.32
69 AT3G06290 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3B, yeast Sac3 homolog B 0.55 0.33 -0.32
70 AT5G44820 Nucleotide-diphospho-sugar transferase family protein -0.54 0.33 -0.31
71 AT5G67430 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.54 0.34 -0.32
72 AT5G25910 receptor like protein 52 receptor like protein 52, receptor
like protein 52		 -0.54 0.33 -0.31
73 AT5G16320 FRIGIDA like 1 FRIGIDA like 1 -0.53 0.3 -0.32
74 AT2G13020 transposable element gene -0.53 0.32 -0.31
75 AT3G03020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 5 Blast hits to 5 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.31 -0.33
76 AT2G23680 Cold acclimation protein WCOR413 family -0.52 0.32 -0.31
77 AT3G27980 Plant invertase/pectin methylesterase inhibitor superfamily -0.52 0.33 -0.31
78 AT5G38400 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.51 0.33 -0.32
79 AT1G06770 DREB2A-interacting protein 1 DREB2A-interacting protein 1 -0.51 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.8 0.45 -0.44 C0234
81 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.73 0.45 -0.46 C0099
82 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.72 0.45 -0.45 C0186
83 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		0.71 0.32 -0.31 C0005
84 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.7 0.41 -0.43
85 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.67 0.43 -0.45 C0032
86 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.64 0.46 -0.45 C0053
87 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III 0.58 0.45 -0.45 C0195