AGICode | AT3G12820 |
Description | myb domain protein 10 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G12820 | myb domain protein 10 | myb domain protein 10, myb domain protein 10 |
1 | 0.31 | -0.3 | ||
2 | AT5G47810 | phosphofructokinase 2 | phosphofructokinase 2 | -0.75 | 0.33 | -0.31 | ||
3 | AT2G25450 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.73 | 0.34 | -0.32 | |||
4 | AT1G57620 | emp24/gp25L/p24 family/GOLD family protein | 0.72 | 0.3 | -0.31 | |||
5 | AT2G29130 | laccase 2 | ATLAC2, laccase 2 | -0.71 | 0.31 | -0.33 | ||
6 | AT3G51310 | VPS35 homolog C | VPS35 homolog C | -0.71 | 0.33 | -0.3 | ||
7 | AT2G25650 | DNA-binding storekeeper protein-related transcriptional regulator |
-0.69 | 0.34 | -0.33 | |||
8 | AT5G35740 | Carbohydrate-binding X8 domain superfamily protein | 0.68 | 0.3 | -0.33 | |||
9 | AT4G19500 | nucleoside-triphosphatases;transmembrane receptors;nucleotide binding;ATP binding |
-0.68 | 0.3 | -0.3 | |||
10 | AT5G16550 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.68 | 0.33 | -0.32 | |||
11 | AT2G35880 | TPX2 (targeting protein for Xklp2) protein family | 0.66 | 0.3 | -0.3 | |||
12 | AT2G40170 | Stress induced protein | ARABIDOPSIS EARLY METHIONINE-LABELLED 6, EARLY METHIONINE-LABELLED 6, LATE EMBRYOGENESIS ABUNDANT 6 |
-0.66 | 0.31 | -0.3 | ||
13 | AT2G45120 | C2H2-like zinc finger protein | 0.65 | 0.31 | -0.33 | |||
14 | AT5G28630 | glycine-rich protein | 0.64 | 0.3 | -0.36 | |||
15 | AT1G23320 | tryptophan aminotransferase related 1 | tryptophan aminotransferase related 1 |
0.64 | 0.32 | -0.33 | ||
16 | AT2G35940 | BEL1-like homeodomain 1 | BEL1-like homeodomain 1, embryo sac development arrest 29 |
-0.64 | 0.34 | -0.29 | ||
17 | AT1G68330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits to 147 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
0.63 | 0.31 | -0.32 | |||
18 | AT4G16900 | Disease resistance protein (TIR-NBS-LRR class) family | -0.63 | 0.32 | -0.31 | |||
19 | AT4G25560 | myb domain protein 18 | myb domain protein 18, LONG AFTER FAR-RED LIGHT 1, myb domain protein 18 |
0.63 | 0.29 | -0.32 | ||
20 | AT3G48370 | transposable element gene | 0.63 | 0.31 | -0.3 | |||
21 | AT5G58380 | SOS3-interacting protein 1 | CBL-INTERACTING PROTEIN KINASE 10, PKS2, SOS3-interacting protein 1, SNF1-RELATED PROTEIN KINASE 3.8 |
-0.63 | 0.33 | -0.32 | ||
22 | AT2G28030 | Eukaryotic aspartyl protease family protein | 0.63 | 0.32 | -0.32 | |||
23 | AT5G44740 | Y-family DNA polymerase H | Y-family DNA polymerase H | 0.62 | 0.32 | -0.3 | ||
24 | AT1G62960 | ACC synthase 10 | ACC synthase 10 | 0.62 | 0.33 | -0.33 | ||
25 | AT3G46810 | Cysteine/Histidine-rich C1 domain family protein | 0.62 | 0.34 | -0.33 | |||
26 | AT1G03750 | switch 2 | CHROMATIN REMODELING 9 | -0.62 | 0.33 | -0.32 | ||
27 | AT4G20480 | Putative endonuclease or glycosyl hydrolase | -0.62 | 0.3 | -0.3 | |||
28 | AT4G16160 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein |
ATOEP16-2, ATOEP16-S | -0.61 | 0.34 | -0.31 | ||
29 | AT2G16820 | transposable element gene | 0.61 | 0.32 | -0.29 | |||
30 | AT5G34790 | transposable element gene | 0.61 | 0.34 | -0.31 | |||
31 | AT2G42700 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vesicle-mediated transport, vesicle docking involved in exocytosis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like protein (InterPro:IPR001619); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.33 | -0.3 | |||
32 | AT1G50650 | Stigma-specific Stig1 family protein | 0.61 | 0.32 | -0.31 | |||
33 | AT1G23330 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.31 | -0.32 | |||
34 | AT1G10880 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
0.61 | 0.33 | -0.32 | |||
35 | AT3G57980 | DNA-binding bromodomain-containing protein | -0.6 | 0.3 | -0.29 | |||
36 | AT2G34840 | Coatomer epsilon subunit | -0.6 | 0.3 | -0.32 | |||
37 | AT5G07920 | diacylglycerol kinase1 | DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 |
-0.6 | 0.31 | -0.32 | ||
38 | AT1G54330 | NAC domain containing protein 20 | NAC domain containing protein 20, NAC domain containing protein 20 |
0.6 | 0.33 | -0.31 | ||
39 | AT2G43280 | Far-red impaired responsive (FAR1) family protein | 0.6 | 0.32 | -0.32 | |||
40 | AT1G33360 | ATP-dependent Clp protease | -0.6 | 0.32 | -0.31 | |||
41 | AT3G43740 | Leucine-rich repeat (LRR) family protein | 0.6 | 0.32 | -0.31 | |||
42 | AT1G08250 | arogenate dehydratase 6 | arogenate dehydratase 6, Arabidopsis thaliana arogenate dehydratase 6 |
-0.6 | 0.32 | -0.29 | ||
43 | AT1G60750 | NAD(P)-linked oxidoreductase superfamily protein | -0.59 | 0.31 | -0.31 | |||
44 | AT5G35660 | Glycine-rich protein family | -0.59 | 0.3 | -0.32 | |||
45 | AT2G12720 | transposable element gene | -0.59 | 0.31 | -0.32 | |||
46 | AT1G63770 | Peptidase M1 family protein | -0.58 | 0.32 | -0.3 | |||
47 | AT1G15330 | Cystathionine beta-synthase (CBS) protein | -0.58 | 0.32 | -0.32 | |||
48 | AT5G04010 | F-box family protein | -0.58 | 0.3 | -0.3 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
49 | C0258 | Tryptophan amide (NH3+) | D,L-Tryptophan amide (NH3+) | - | - | -0.77 | 0.46 | -0.44 | ||
50 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.73 | 0.44 | -0.43 | ||
51 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
-0.7 | 0.41 | -0.47 | ||
52 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.65 | 0.44 | -0.46 | ||
53 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
-0.62 | 0.32 | -0.31 | ||
54 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.6 | 0.43 | -0.45 |