AT1G27050 : -
Query Information
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AGICode AT1G27050
Description homeobox protein 54
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G27050 homeobox protein 54 1 0.31 -0.33
2 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.79 0.31 -0.32
3 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.77 0.28 -0.33
4 AT3G25120 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 0.76 0.32 -0.34
5 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.73 0.31 -0.32
6 AT5G18420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2363
(InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.72 0.32 -0.33
7 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.72 0.3 -0.3
8 AT3G21140 Pyridoxamine 5'-phosphate oxidase family protein 0.71 0.33 -0.3
9 AT2G22360 DNAJ heat shock family protein 0.69 0.33 -0.3
10 AT5G05520 Outer membrane OMP85 family protein 0.68 0.32 -0.34
11 AT5G65500 U-box domain-containing protein kinase family protein -0.68 0.31 -0.33
12 AT3G63090 Ubiquitin carboxyl-terminal hydrolase family protein 0.68 0.31 -0.32
13 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2		 0.68 0.3 -0.33
14 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.67 0.33 -0.32
15 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 0.67 0.32 -0.32
16 AT3G06310 Cox19-like CHCH family protein 0.67 0.32 -0.32
17 AT3G20330 PYRIMIDINE B PYRIMIDINE B 0.66 0.31 -0.33
18 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.66 0.32 -0.33
19 AT5G46210 cullin4 ATCUL4, cullin4 0.66 0.32 -0.32
20 AT5G49530 SIN-like family protein 0.66 0.34 -0.33
21 AT3G48570 secE/sec61-gamma protein transport protein 0.66 0.33 -0.31
22 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.66 0.31 -0.31
23 AT4G24840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein transport, Golgi organization; LOCATED IN: vacuole;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: COG complex
component, COG2 (InterPro:IPR009316); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.65 0.31 -0.32
24 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 0.65 0.31 -0.33
25 AT4G20140 Leucine-rich repeat transmembrane protein kinase GASSHO1 -0.65 0.32 -0.32
26 AT5G17420 Cellulose synthase family protein ATCESA7, CELLULOSE SYNTHASE
CATALYTIC SUBUNIT 7, IRREGULAR
XYLEM 3, MURUS 10		 -0.64 0.32 -0.32
27 AT1G17470 developmentally regulated G-protein 1 ATDRG, developmentally regulated
G-protein 1, developmentally
regulated G-protein 1		 0.64 0.3 -0.31
28 AT5G03090 BEST Arabidopsis thaliana protein match is: mto 1
responding down 1 (TAIR:AT1G53480.1); Has 7 Blast hits to 7
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.64 0.32 -0.31
29 AT5G11900 Translation initiation factor SUI1 family protein 0.64 0.32 -0.32
30 AT5G66820 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.64 0.32 -0.32
31 AT2G20770 GCR2-like 2 GCR2-like 2 -0.64 0.33 -0.33
32 AT4G16750 Integrase-type DNA-binding superfamily protein -0.62 0.3 -0.33
33 AT2G12400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in
23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi -
0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 -0.62 0.32 -0.32
34 AT1G79420 Protein of unknown function (DUF620) -0.61 0.31 -0.32
35 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.61 0.31 -0.3
36 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.33
37 AT2G16410 transposable element gene -0.58 0.3 -0.3
38 AT1G58270 TRAF-like family protein ZW9 -0.57 0.34 -0.31
39 AT2G37090 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 -0.56 0.32 -0.3
40 AT1G48050 Ku80 family protein ARABIDOPSIS THALIANA KU80 HOMOLOG,
KU80		 -0.55 0.33 -0.33
41 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 -0.55 0.33 -0.29
42 AT1G77240 AMP-dependent synthetase and ligase family protein -0.54 0.3 -0.31
43 AT3G56590 hydroxyproline-rich glycoprotein family protein -0.54 0.3 -0.33
44 AT1G03920 Protein kinase family protein -0.54 0.31 -0.31
45 AT1G07485 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex,
embryo, leaf whorl, pedicel; EXPRESSED DURING: 4 anthesis,
D bilateral stage; Has 5 Blast hits to 5 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.31 -0.31
46 AT5G47635 Pollen Ole e 1 allergen and extensin family protein -0.54 0.32 -0.31
47 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 -0.53 0.31 -0.33
48 AT1G24030 Protein kinase superfamily protein -0.53 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
49 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.68 0.46 -0.48 C0032
50 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.65 0.45 -0.46 C0267
51 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.64 0.44 -0.43 C0053
52 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		-0.55 0.29 -0.33 C0022
53 C0064 Campesterol 3-O-β-D-glucoside - - - -0.54 0.33 -0.34
54 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		-0.53 0.33 -0.31 C0005