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Cotyledons
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Cotyledons Col-0 no treatment /
cotyledons		 Control for tissue data Developmental series; organs / tissues at different ages 1.00  
1.00  
2 Rosette leaf No2 Col-0 no treatment / rosette
leaf #4		 Control for tissue data Developmental series; organs / tissues at different ages 0.82  
0.83  
3 Distal half (leaf7) Col-0 no treatment / leaf 7,
distal half		 Control for tissue data Developmental series; organs / tissues at different ages 0.82  
0.84  
4 Proximalhalf (leaf7) Col-0 no treatment / leaf 7,
proximal half		 Control for tissue data Developmental series; organs / tissues at different ages 0.77  
0.81  
5 Flower (stage12) Col-0 no treatment / flower
(CAGE, long days)		 Control for tissue data Developmental series; organs / tissues at different ages -0.72  
-0.57  
6 Carpels stage15 Col-0 no treatment / flowers
stage 15, carpels		 Control for tissue data Developmental series; organs / tissues at different ages -0.69  
-0.58  
7 Shoot apex transition (before bolting) Col-0 no treatment / shoot
apex, transition (before
bolting)		 Control for tissue data Developmental series; organs / tissues at different ages -0.68  
-0.69  
8 Shoot apex inflorescence (after bolting) Col-0 no treatment / shoot
apex, inflorescenze
(after bolting)		 Control for tissue data Developmental series; organs / tissues at different ages -0.68  
-0.68  
9 Cauline leaves Col-0 no treatment / cauline
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.65  
0.70  
10 Seeds stage3 with siliques Col-0 no treatment / siliques,
w/ seeds stage 3 (long
days)		 Control for tissue data Developmental series; organs / tissues at different ages -0.61  
-0.51  
11 Senescing leaf Col-0 no treatment / senescing
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.52  
0.44  
12 Shoot apex vegetative Col-0 no treatment / shoot
apex, vegetative		 Control for tissue data Developmental series; organs / tissues at different ages -0.47  
-0.55  
13 UV Stress 24 h (shoot) Col-0 UV-B stress (15 min 1.8
W/m2 Philips TL40W/12;
thereafter recovery) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.38  
0.52  
14 Mutant ga1-5 ga1-5 no treatment / seedling Ler-1 Comparison of plant hormone related mutant -0.35  
-0.64  
15 Mutant ufo-1(flower) ufo-1 no treatment / flower
stage 12; filamentous
organs in whorls two and
three 		Flowers stage12 Developmental series; organs / tissues at different ages 0.15  
0.50  
16 Mutant sav3-2 (WL) sav3-2 Continuous white light /
seedling		 Col-0 (WL) GEO bulk 0.15  
0.54  
17 Norflurazon Col-0 5 µM Norflurazon /
seedling		 Col-0 GEO bulk -0.12  
-0.61  
18 Dark 4 h pls RedLight 1min Col-0 1 min. red light pulse
followed by 4 h of
darkness / seedlings		 Dark 4 h Light treatments 0.10  
0.59  
19 Brassinolide 1 h (det2) det2-1 10 nM brassinolide /
seedling		 Mock 1 h (det2) Basic hormone treatment of seedlings -0.02  
0.65  
20 Red Light 4 h Col-0 continuous Red Light /
seedlings		 White Light 4 h Light treatments -0.02  
-0.50