Score |
Experiment |
Genotype |
Treatment / Tissue |
Control Experiment |
Experimental Category |
Correlation |
Gene list |
1 |
Norflurazon |
Col-0 |
5 µM Norflurazon / seedling |
Col-0 |
GEO bulk |
1.00
1.00
|
|
2 |
Mature roots |
Col-0 |
no treatment / roots |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.74
0.42
|
|
3 |
Hypocotyl |
Col-0 |
no treatment / hypocotyls |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.68
0.37
|
|
4 |
Mutant lfy-12(shoot apex) |
lfy-12 |
no treatment / shoot apex, inflorescence (after bolting) |
Shoot apex inflorescence (after bolting) |
Developmental series; organs / tissues at different ages |
-0.68
-0.22
|
|
5 |
ARR21C-ox |
ARR21C-ox |
no treatment / seedling |
Col-0 |
ARR21C overexpression |
0.67
0.30
|
|
6 |
Expanding leaf |
Col-0 |
no treatment / leaves (CAGE, long days) |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.67
-0.41
|
|
7 |
Rosette leaf No12 |
gl1-T |
no treatment / rosette leaf #12 |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.64
-0.23
|
|
8 |
Distal half (leaf7) |
Col-0 |
no treatment / leaf 7, distal half |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.64
-0.12
|
|
9 |
Dark 4 h pls UV-A 5 min |
Col-0 |
5 min. UV-A light pulse followed by 4 h of darkness / seedlings |
Dark 4 h |
Light treatments |
-0.63
-0.39
|
|
10 |
Proximalhalf (leaf7) |
Col-0 |
no treatment / leaf 7, proximal half |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.63
-0.21
|
|
11 |
Seeds stage8 w/o siliques |
Col-0 |
no treatment / seeds stage 8, w/o siliques (long days) |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.63
0.13
|
|
12 |
Flagellin 4 h (leaf) |
Col-0 |
infiltrated with 1 µM Flg22 / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.62
0.28
|
|
13 |
Pedicels stage15 |
Col-0 |
no treatment / flowers stage 15, pedicels |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.62
-0.20
|
|
14 |
Mature pollen |
Col-0 |
no treatment / mature pollen |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.62
0.02
|
|
15 |
UV Stress 24 h (shoot) |
Col-0 |
UV-B stress (15 min 1.8 W/m2 Philips TL40W/12; thereafter recovery) / shoots |
Stress mock 24 h (shoot) |
Stress treatments |
0.61
0.46
|
|
16 |
Dark 4 h pls RedLight 1min |
Col-0 |
1 min. red light pulse followed by 4 h of darkness / seedlings |
Dark 4 h |
Light treatments |
-0.61
-0.57
|
|
17 |
Cotyledons |
Col-0 |
no treatment / cotyledons |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.61
-0.12
|
|
18 |
Shoot apex transition (before bolting) |
Col-0 |
no treatment / shoot apex, transition (before bolting) |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.61
0.08
|
|
19 |
Mutant ag-12(shoot apex) |
ag-12 |
no treatment / shoot apex, inflorescence (after bolting) |
Shoot apex inflorescence (after bolting) |
Developmental series; organs / tissues at different ages |
-0.59
-0.33
|
|
20 |
P. infestans 6 h (leaf) |
Col-0 |
P. infestans 6 h (leaf) / leaves |
Mock 6 h (leaf) |
Elicitor treatments |
0.58
0.36
|
|
21 |
Shoot apex vegetative |
Col-0 |
no treatment / shoot apex, vegetative |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.58
0.16
|
|
22 |
Shoot apex inflorescence (after bolting) |
Col-0 |
no treatment / shoot apex, inflorescenze (after bolting) |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.58
0.07
|
|
23 |
Mutant coi1(leaf) |
coi1 |
no treatment / leaves |
Col-0 (leaf) |
GEO bulk |
-0.58
-0.19
|
|
24 |
Prohexadione 3 h |
Col-0 |
10 µM prohexadione / seedling |
Mock 3 h |
Effect of GA inhibitors on seedlings |
-0.57
-0.46
|
|
25 |
GST NPP1 4 h (leaf) |
Col-0 |
infiltrated with 1 µM GST-NPP1 / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.57
0.28
|
|
26 |
Rosette leaf No2 |
Col-0 |
no treatment / rosette leaf #4 |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.56
-0.07
|
|
27 |
Osmotic Stress 24 h (root) |
Col-0 |
osmotic stress (300 mM mannitol) / roots |
Stress mock 24 h (root) |
Stress treatments |
-0.55
-0.29
|
|
28 |
HairpinZ 4 h (leaf) |
Col-0 |
infiltrated with 10 µM HrpZ / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.55
0.27
|
|
29 |
GST 4 h (leaf) |
Col-0 |
infiltrated with 1µM GST / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.54
0.40
|
|
30 |
Imbibed 3 h (seed) |
Col-0 |
imbibed seeds (water) / seeds |
Dry seed |
Time course of early seed germination |
0.53
0.38
|
|
31 |
Lipopolysaccaride4 h (leaf) |
Col-0 |
infiltrated with 100 µg/ml LPS / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.51
0.25
|
|
32 |
Mutant cry1 (High Light) |
cry1 |
high light: 1000 µmol quanta m-2 s-1 / seedling |
Col-0 (High Light) |
GEO bulk |
-0.51
-0.38
|
|
33 |
Mutant iaa5_6_19 |
iaa5 iaa6 iaa19 |
mock / seedling |
Col |
GEO bulk |
0.41
0.53
|
|
34 |
Mutant arf2-6 |
arf2-6 |
mock / seedling |
Col |
GEO bulk |
-0.41
-0.50
|
|
35 |
Phytoprostane A1 4 h |
Col |
75 µM phytoprostane A1 / seedling |
Col-0 |
GEO bulk |
0.39
0.52
|
|
36 |
ABA 3 h |
Col-0 |
10 µM ABA / seedling |
Mock 3 h |
Basic hormone treatment of seedlings |
-0.38
-0.50
|
|
37 |
FarRed Light 45min |
Col-0 |
continuous far red light / seedlings |
White Light 45min |
Light treatments |
-0.18
-0.54
|
|
38 |
Genotoxic Stress 3 h (shoot) |
Col-0 |
genotoxic stress (1.5 µg/ml bleomycin + 22 µg/ml mitomycin) / shoots |
Stress mock 3 h (shoot) |
Stress treatments |
-0.10
0.53
|
|
39 |
2,3,5-Triiodobenzoic acid3 h |
Col-0 |
10 µM TIBA / seedling |
Mock 3 h |
Effect of auxin inhibitors on seedlings |
-0.07
0.52
|
|
40 |
ABA 1 h |
Col-0 |
10 µM ABA / seedling |
Mock 1 h |
Basic hormone treatment of seedlings |
-0.02
-0.74
|
|
41 |
-Sulfate 24 h |
Col-0 |
0 µM sulfate / root |
Mock 24 h (1500uM sulfate) |
Response to sulfate limitation |
-0.01
-0.51
|
|