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ABA 1 h
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 ABA 1 h Col-0 10 µM ABA / seedling Mock 1 h Basic hormone treatment of seedlings 1.00  
1.00  
2 ABA 3 h Col-0 10 µM ABA / seedling Mock 3 h Basic hormone treatment of seedlings 0.89  
0.77  
3 ABA 0.5 h Col-0 10 µM ABA / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.85  
0.75  
4 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots
Stress mock 24 h (root) Stress treatments 0.79  
0.57  
5 Cold Stress 24 h (shoot) Col-0 cold stress (4˚) /
shoots
Stress mock 24 h (shoot) Stress treatments 0.75  
0.50  
6 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots
Stress mock 24 h (root) Stress treatments 0.75  
0.23  
7 P.syringae vir 4 h (leaf) Col-0 P.syringae vir 4 h
(leaf) / leaves
Mock 4 h (leaf) Elicitor treatments 0.75  
0.18  
8 Norflurazon Col-0 5 µM Norflurazon /
seedling
Col-0 GEO bulk -0.74  
-0.02  
9 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals
Control for tissue data Developmental series; organs / tissues at different ages 0.73  
0.21  
10 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots
Stress mock 24 h (shoot) Stress treatments 0.72  
0.49  
11 Selenate (shoot) WS Selenate 40 µM /
shoot
Ws (shoot) GEO bulk 0.71  
0.41  
12 Prohexadione 12 h Col-0 10 µM prohexadione /
seedling
Mock 12 h Effect of GA inhibitors on seedlings 0.70  
0.42  
13 Salt Stress 24 h (shoot) Col-0 salt stress (150 mM
NaCl) / shoots
Stress mock 24 h (shoot) Stress treatments 0.70  
0.55  
14 Prohexadione 3 h Col-0 10 µM prohexadione /
seedling
Mock 3 h Effect of GA inhibitors on seedlings 0.67  
0.22  
15 Flowers stage15 Col-0 no treatment / flowers
stage 15
Control for tissue data Developmental series; organs / tissues at different ages 0.67  
0.12  
16 Dark 44min pls RedLigh 1min Col-0 1 min. red light pulse
followed by 44 min.
darkness / seedlings
Dark 45 min Light treatments 0.66  
0.07  
17 Dark 40 min pls UV-A 5 min Col-0 5 min. UV-A light pulse
followed by 40 min. of
darkness / seedlings
Dark 45 min Light treatments 0.65  
0.24  
18 Mutant siz1-3 siz1-3 mock / not identified Col-0 GEO bulk -0.65  
0.03  
19 Imbibed 24 h ABA 30uM (seed) Col-0 imbibed seeds (30 µM
ABA) / seeds
Imbibed 24 h (seed) Effect of ABA during seed imbibition 0.64  
0.05  
20 Senescing leaf Col-0 no treatment / senescing
leaves
Control for tissue data Developmental series; organs / tissues at different ages 0.63  
0.19  
21 Imbibed 24 h ABA 3uM (seed) Col-0 imbibed seeds (3 µM
ABA) / seeds
Imbibed 24 h (seed) Effect of ABA during seed imbibition 0.61  
0.19  
22 Mutant gh3.5-1D gh3.5-1D no treatment / leaves Col-0 GEO bulk 0.61  
0.35  
23 Fe starvation 24 h Col Fe starvation / whole
roots
Control GEO bulk 0.60  
0.28  
24 Red Light 1h Col-0 Red Light / seedling Wild type(Dark) GEO bulk 0.56  
0.21  
25 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling
Col-0 GEO bulk 0.56  
0.40  
26 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves
Col-0 (AvrRpt2) GEO bulk 0.56  
0.41  
27 ARR22-ox ARR22-ox no treatment / seedling Col-0 Cytokinin treatment of seedlings 0.54  
0.20  
28 GA4 9 h (ga1, seed) ga1-3 5 µM GA4 / seeds Mock 9 h (ga1, seed) Effect of gibberellin during seed imbibition -0.54  
-0.23  
29 Mutant phyB (Dark) phyB Dark / seedling Wild type(Dark) GEO bulk -0.54  
-0.25  
30 Mutant hy5 (High Light) hy5 high light: 1000
µmol quanta m-2 s-1
/ seedling
Col-0 (High Light) GEO bulk 0.54  
0.02  
31 Cold Stress 24 h (root) Col-0 cold stress (4˚) /
roots
Stress mock 24 h (root) Stress treatments 0.53  
0.36  
32 FarRed Light 4 h Col-0 continuous far red light
/ seedlings
White Light 4 h Light treatments 0.53  
0.24  
33 Dark 40min pls UV-AB 5min Col-0 5 min. UV-A/B light
pulse followed by 40
min. of darkness /
seedlings
Dark 45 min Light treatments 0.53  
0.11  
34 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling
Mock 1 h Basic hormone treatment of seedlings 0.52  
0.25  
35 Mutant ga1-5 ga1-5 no treatment / seedling Ler-1 Comparison of plant hormone related mutant 0.52  
-0.01  
36 Shoot apex vegetative &Young leaves Col-0 no treatment / shoot
apex, vegetative and
young leaves
Control for tissue data Developmental series; organs / tissues at different ages -0.52  
-0.13  
37 Petals stage15 Col-0 no treatment / flowers
stage 15, petals
Control for tissue data Developmental series; organs / tissues at different ages 0.52  
0.17  
38 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves
Mock 4 h (leaf) Elicitor treatments 0.52  
0.07  
39 Petiol (leaf7) Col-0 no treatment / leaf 7,
petiole
Control for tissue data Developmental series; organs / tissues at different ages -0.51  
-0.25  
40 UV Stress 24 h (root) Col-0 UV-B stress (15 min 1.8
W/m2 Philips TL40W/12;
thereafter recovery) /
roots
Stress mock 24 h (root) Stress treatments 0.50  
-0.02  
41 Shoot apex vegetative Col-0 no treatment / shoot
apex, vegetative
Control for tissue data Developmental series; organs / tissues at different ages -0.50  
-0.09  
42 Dark 4 h pls UV-A 5 min Col-0 5 min. UV-A light pulse
followed by 4 h of
darkness / seedlings
Dark 4 h Light treatments 0.15  
-0.50