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ABA 1 h
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Score
Experiment
Genotype
Treatment / Tissue
Control Experiment
Experimental Category
Correlation
Gene list
1
ABA 1 h
Col-0
10 µM ABA / seedling
Mock 1 h
Basic hormone treatment of seedlings
1.00
1.00
2
ABA 3 h
Col-0
10 µM ABA / seedling
Mock 3 h
Basic hormone treatment of seedlings
0.89
0.77
3
ABA 0.5 h
Col-0
10 µM ABA / seedling
Mock 0.5 h
Basic hormone treatment of seedlings
0.85
0.75
4
Osmotic Stress 24 h (root)
Col-0
osmotic stress (300 mM
mannitol) / roots
Stress mock 24 h (root)
Stress treatments
0.79
0.57
5
Cold Stress 24 h (shoot)
Col-0
cold stress (4˚) /
shoots
Stress mock 24 h (shoot)
Stress treatments
0.75
0.50
6
Salt Stress 24 h (root)
Col-0
salt stress (150 mM
NaCl) / roots
Stress mock 24 h (root)
Stress treatments
0.75
0.23
7
P.syringae vir 4 h (leaf)
Col-0
P.syringae vir 4 h
(leaf) / leaves
Mock 4 h (leaf)
Elicitor treatments
0.75
0.18
8
Norflurazon
Col-0
5 µM Norflurazon /
seedling
Col-0
GEO bulk
-0.74
-0.02
9
Sepals stage15
Col-0
no treatment / flowers
stage 15, sepals
Control for tissue data
Developmental series; organs / tissues at different ages
0.73
0.21
10
Osmotic Stress 24 h (shoot)
Col-0
osmotic stress (300 mM
mannitol) / shoots
Stress mock 24 h (shoot)
Stress treatments
0.72
0.49
11
Selenate (shoot)
WS
Selenate 40 µM /
shoot
Ws (shoot)
GEO bulk
0.71
0.41
12
Prohexadione 12 h
Col-0
10 µM prohexadione /
seedling
Mock 12 h
Effect of GA inhibitors on seedlings
0.70
0.42
13
Salt Stress 24 h (shoot)
Col-0
salt stress (150 mM
NaCl) / shoots
Stress mock 24 h (shoot)
Stress treatments
0.70
0.55
14
Prohexadione 3 h
Col-0
10 µM prohexadione /
seedling
Mock 3 h
Effect of GA inhibitors on seedlings
0.67
0.22
15
Flowers stage15
Col-0
no treatment / flowers
stage 15
Control for tissue data
Developmental series; organs / tissues at different ages
0.67
0.12
16
Dark 44min pls RedLigh 1min
Col-0
1 min. red light pulse
followed by 44 min.
darkness / seedlings
Dark 45 min
Light treatments
0.66
0.07
17
Dark 40 min pls UV-A 5 min
Col-0
5 min. UV-A light pulse
followed by 40 min. of
darkness / seedlings
Dark 45 min
Light treatments
0.65
0.24
18
Mutant siz1-3
siz1-3
mock / not identified
Col-0
GEO bulk
-0.65
0.03
19
Imbibed 24 h ABA 30uM (seed)
Col-0
imbibed seeds (30 µM
ABA) / seeds
Imbibed 24 h (seed)
Effect of ABA during seed imbibition
0.64
0.05
20
Senescing leaf
Col-0
no treatment / senescing
leaves
Control for tissue data
Developmental series; organs / tissues at different ages
0.63
0.19
21
Imbibed 24 h ABA 3uM (seed)
Col-0
imbibed seeds (3 µM
ABA) / seeds
Imbibed 24 h (seed)
Effect of ABA during seed imbibition
0.61
0.19
22
Mutant gh3.5-1D
gh3.5-1D
no treatment / leaves
Col-0
GEO bulk
0.61
0.35
23
Fe starvation 24 h
Col
Fe starvation / whole
roots
Control
GEO bulk
0.60
0.28
24
Red Light 1h
Col-0
Red Light / seedling
Wild type(Dark)
GEO bulk
0.56
0.21
25
Phytoprostane A1 4 h
Col
75 µM phytoprostane
A1 / seedling
Col-0
GEO bulk
0.56
0.40
26
Mutant gh3.5-1D (AvrRpt2)
gh3.5-1D
Pst DC3000(avrRpt2) /
leaves
Col-0 (AvrRpt2)
GEO bulk
0.56
0.41
27
ARR22-ox
ARR22-ox
no treatment / seedling
Col-0
Cytokinin treatment of seedlings
0.54
0.20
28
GA4 9 h (ga1, seed)
ga1-3
5 µM GA4 / seeds
Mock 9 h (ga1, seed)
Effect of gibberellin during seed imbibition
-0.54
-0.23
29
Mutant phyB (Dark)
phyB
Dark / seedling
Wild type(Dark)
GEO bulk
-0.54
-0.25
30
Mutant hy5 (High Light)
hy5
high light: 1000
µmol quanta m-2 s-1
/ seedling
Col-0 (High Light)
GEO bulk
0.54
0.02
31
Cold Stress 24 h (root)
Col-0
cold stress (4˚) /
roots
Stress mock 24 h (root)
Stress treatments
0.53
0.36
32
FarRed Light 4 h
Col-0
continuous far red light
/ seedlings
White Light 4 h
Light treatments
0.53
0.24
33
Dark 40min pls UV-AB 5min
Col-0
5 min. UV-A/B light
pulse followed by 40
min. of darkness /
seedlings
Dark 45 min
Light treatments
0.53
0.11
34
Methyl Jasmonate 1 h
Col-0
10 µM Metyl
Jasmonate / seedling
Mock 1 h
Basic hormone treatment of seedlings
0.52
0.25
35
Mutant ga1-5
ga1-5
no treatment / seedling
Ler-1
Comparison of plant hormone related mutant
0.52
-0.01
36
Shoot apex vegetative &Young leaves
Col-0
no treatment / shoot
apex, vegetative and
young leaves
Control for tissue data
Developmental series; organs / tissues at different ages
-0.52
-0.13
37
Petals stage15
Col-0
no treatment / flowers
stage 15, petals
Control for tissue data
Developmental series; organs / tissues at different ages
0.52
0.17
38
P.syringae AvrRpt2 4 h (leaf)
Col-0
P.syringae avrRpt2 4 h
(leaf) / leaves
Mock 4 h (leaf)
Elicitor treatments
0.52
0.07
39
Petiol (leaf7)
Col-0
no treatment / leaf 7,
petiole
Control for tissue data
Developmental series; organs / tissues at different ages
-0.51
-0.25
40
UV Stress 24 h (root)
Col-0
UV-B stress (15 min 1.8
W/m2 Philips TL40W/12;
thereafter recovery) /
roots
Stress mock 24 h (root)
Stress treatments
0.50
-0.02
41
Shoot apex vegetative
Col-0
no treatment / shoot
apex, vegetative
Control for tissue data
Developmental series; organs / tissues at different ages
-0.50
-0.09
42
Dark 4 h pls UV-A 5 min
Col-0
5 min. UV-A light pulse
followed by 4 h of
darkness / seedlings
Dark 4 h
Light treatments
0.15
-0.50