Score |
Experiment |
Genotype |
Treatment / Tissue |
Control Experiment |
Experimental Category |
Correlation |
Gene list |
1 |
Phytoprostane A1 4 h |
Col |
75 µM phytoprostane A1 / seedling |
Col-0 |
GEO bulk |
1.00 
1.00
|
|
2 |
2,3,5-Triiodobenzoic acid3 h |
Col-0 |
10 µM TIBA / seedling |
Mock 3 h |
Effect of auxin inhibitors on seedlings |
0.85 
0.83
|
|
3 |
OPDA 4 h |
Col |
75 µM OPDA / seedling |
Col-0 |
GEO bulk |
0.84 
0.55
|
|
4 |
AgNO3 3 h |
Col-0 |
10 µM AgNO3 / seedling |
Mock 3 h |
Effect of ethylene inhibitors on seedlings |
0.70 
0.73
|
|
5 |
ARR21C-ox |
ARR21C-ox |
no treatment / seedling |
Col-0 |
ARR21C overexpression |
0.69 
0.39
|
|
6 |
Salicylic Acid 3 h |
Col-0 |
10µM salicylic acid / seedlings |
Mock 3 h |
Effect of other inhibitors on seedlings |
0.68 
0.37
|
|
7 |
PNO8 12 h |
Col-0 |
1 µM PNO8 / seedlings |
Mock 12 h |
Effect of other inhibitors on seedlings |
0.66 
0.12
|
|
8 |
2,4,6-trichlorophenoxyacetic acid 3 h |
Col-0 |
10 µM 2,4,6T / seedling |
Mock 3 h |
Effect of auxin inhibitors on seedlings |
0.64 
0.76
|
|
9 |
Salt Stress 24 h (root) |
Col-0 |
salt stress (150 mM NaCl) / roots |
Stress mock 24 h (root) |
Stress treatments |
0.64 
0.46
|
|
10 |
Sepals stage15 |
Col-0 |
no treatment / flowers stage 15, sepals |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.62 
0.45
|
|
11 |
Osmotic Stress 24 h (shoot) |
Col-0 |
osmotic stress (300 mM mannitol) / shoots |
Stress mock 24 h (shoot) |
Stress treatments |
0.60 
0.55
|
|
12 |
Osmotic Stress 24 h (root) |
Col-0 |
osmotic stress (300 mM mannitol) / roots |
Stress mock 24 h (root) |
Stress treatments |
0.60 
0.42
|
|
13 |
K starvation (root) |
ws-2 |
K starvation / root |
Ws (root) |
GEO bulk |
0.60 
0.57
|
|
14 |
Selenate (root) |
WS |
Selenate 40 µM / root |
Ws (root) |
GEO bulk |
0.58 
0.45
|
|
15 |
PNO8 3 h |
Col-0 |
1 µM PNO8 / seedlings |
Mock 3 h |
Effect of other inhibitors on seedlings |
0.57 
0.69
|
|
16 |
DC3000 2 h (leaf) |
Col-0 |
infiltrated with 108 cfu/ml P. syringae pv. tomato DC3000 harvested after 2h / leaves |
Mock 2 h (leaf) |
Pseudomonas syringae pv. tomato or pv. phaseolicola infection |
0.57 
0.51
|
|
17 |
GST 4 h (leaf) |
Col-0 |
infiltrated with 1µM GST / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.57 
0.29
|
|
18 |
HairpinZ 4 h (leaf) |
Col-0 |
infiltrated with 10 µM HrpZ / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.56 
0.44
|
|
19 |
Ibuprofen 3 h |
Col-0 |
10 µM Ibuprofen / seedlings |
Mock 3 h |
Effect of other inhibitors on seedlings |
0.53 
0.81
|
|
20 |
Fe starvation 72 h |
Col |
Fe starvation / whole roots |
Control |
GEO bulk |
0.53 
0.41
|
|
21 |
Norflurazon |
Col-0 |
5 µM Norflurazon / seedling |
Col-0 |
GEO bulk |
0.52 
0.39
|
|
22 |
ARR22-ox |
ARR22-ox |
no treatment / seedling |
Col-0 |
Cytokinin treatment of seedlings |
0.51 
0.24
|
|
23 |
Cold Stress 24 h (root) |
Col-0 |
cold stress (4˚) / roots |
Stress mock 24 h (root) |
Stress treatments |
0.51 
0.41
|
|
24 |
GST NPP1 4 h (leaf) |
Col-0 |
infiltrated with 1 µM GST-NPP1 / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.51 
0.48
|
|
25 |
Mutant axr3-1 |
axr3-1 |
mock / seedling |
Col |
GEO bulk |
0.51 
0.63
|
|
26 |
Mutant arf2 (etiol) |
arf2 |
mock / etiol seedling |
Col (etiol) |
GEO bulk |
0.51 
0.36
|
|
27 |
Brz220 12 h |
Col-0 |
10 µM BRZ220 / seedling |
Mock 12 h |
Effect of brassinosteroid inhibitors on seedlings |
0.46 
0.54
|
|
28 |
Blue Light 4 h |
Col-0 |
continuous Blue Light / seedlings |
White Light 4 h |
Light treatments |
0.45 
0.67
|
|
29 |
Phaseolicola 2 h (leaf) |
Col-0 |
infiltrated with 108 cfu/ml P. syringae pv. phaseolicola harvested after 2h / leaves |
Mock 2 h (leaf) |
Pseudomonas syringae pv. tomato or pv. phaseolicola infection |
0.41 
0.59
|
|
30 |
ABA 1 h |
Col-0 |
10 µM ABA / seedling |
Mock 1 h |
Basic hormone treatment of seedlings |
0.40 
0.56
|
|
31 |
P. infestans 6 h (leaf) |
Col-0 |
P. infestans 6 h (leaf) / leaves |
Mock 6 h (leaf) |
Elicitor treatments |
0.38 
0.59
|
|
32 |
Mutant axr3-1 (IAA) |
axr3-1 |
5 µM IAA / seedling |
Col (IAA) |
GEO bulk |
0.37 
0.71
|
|
33 |
Mutant gh3.5-1D (AvrRpt2) |
gh3.5-1D |
Pst DC3000(avrRpt2) / leaves |
Col-0 (AvrRpt2) |
GEO bulk |
0.36 
0.56
|
|
34 |
FarRed Light 4 h |
Col-0 |
continuous far red light / seedlings |
White Light 4 h |
Light treatments |
0.33 
0.62
|
|
35 |
B.cinerea 18 h infection |
CS6673 |
B. cinerea infection / leaf |
Mock 18 h |
Botrytis cinerea infection |
0.33 
0.54
|
|
36 |
Mutant cry1 (High Light) |
cry1 |
high light: 1000 µmol quanta m-2 s-1 / seedling |
Col-0 (High Light) |
GEO bulk |
-0.31 
-0.51
|
|
37 |
Estradiol4 days |
Col |
Estradiol 10 µM / seedling |
Col |
GEO bulk |
0.29 
0.50
|
|
38 |
Brassinolide 1 h (det2) |
det2-1 |
10 nM brassinolide / seedling |
Mock 1 h (det2) |
Basic hormone treatment of seedlings |
0.05 
-0.51
|
|
39 |
FarRed Light 45min |
Col-0 |
continuous far red light / seedlings |
White Light 45min |
Light treatments |
0.04 
-0.50
|
|