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B.cinerea 18 h infection
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 1.00  
1.00  
2 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.91  
0.81  
3 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.85  
0.41  
4 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.84  
0.61  
5 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.82  
0.44  
6 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.79  
0.49  
7 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.76  
0.40  
8 Mutant coi1(leaf) coi1 no treatment / leaves Col-0 (leaf) GEO bulk -0.75  
-0.56  
9 Mutant iaa17-6 iaa17-6 mock / seedling Col GEO bulk 0.74  
0.41  
10 OPDA 4 h Col 75 µM OPDA /
seedling		 Col-0 GEO bulk 0.69  
0.46  
11 UV Stress 24 h (shoot) Col-0 UV-B stress (15 min 1.8
W/m2 Philips TL40W/12;
thereafter recovery) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.68  
0.35  
12 Mutant ein2(leaf) ein2 no treatment / leaves Col-0 (leaf) GEO bulk -0.68  
-0.43  
13 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.67  
0.25  
14 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.66  
0.21  
15 Mutant iaa5_6_19 iaa5 iaa6 iaa19 mock / seedling Col GEO bulk 0.65  
0.62  
16 Mutant siz1-3 (Drought) siz1-3 Drought / not
identified		 Col-0 (Drought) GEO bulk 0.65  
0.24  
17 ACC 3 h Col-0 10 µM ACC / seedling Mock 3 h Basic hormone treatment of seedlings 0.64  
0.05  
18 Methyl Jasmonate 3 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 3 h Basic hormone treatment of seedlings 0.63  
0.55  
19 Blue Light 4 h Col-0 continuous Blue Light /
seedlings		 White Light 4 h Light treatments 0.61  
0.35  
20 Senescing leaf Col-0 no treatment / senescing
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.60  
0.34  
21 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves		 Mock 4 h (leaf) Elicitor treatments 0.59  
0.20  
22 Mutant siz1-3 siz1-3 mock / not identified Col-0 GEO bulk 0.59  
0.36  
23 Oxidative Stress 3 h (root) Col-0 oxidative stress (10
µM methyl viologen)
/ roots		 Stress mock 3 h (root) Stress treatments -0.57  
-0.30  
24 Salt Stress 24 h (shoot) Col-0 salt stress (150 mM
NaCl) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.57  
0.55  
25 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.57  
0.50  
26 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.57  
0.65  
27 Mutant nph4-1_arf19-1 nph4-1 arf19-1 mock / seedling Col GEO bulk 0.55  
0.39  
28 Wounding Stress3 h (root) Col-0 wounding (punctured with
pins at beginning of
treatment) / roots		 Stress mock 3 h (root) Stress treatments -0.54  
-0.38  
29 At1g54160 ox At1g54160 ox (NFYA5) no treatment / seedling Col-0 GEO bulk 0.54  
0.20  
30 Selenate (root) WS Selenate 40 µM /
root		 Ws (root) GEO bulk 0.54  
0.08  
31 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling		 Col-0 GEO bulk 0.54  
0.33  
32 Salicylic Acid 3 h Col-0 10µM salicylic acid
/ seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.53  
0.40  
33 ARR22-ox ARR22-ox no treatment / seedling Col-0 Cytokinin treatment of seedlings 0.53  
0.40  
34 2,3,5-Triiodobenzoic acid3 h Col-0 10 µM TIBA /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.52  
0.40  
35 Expanding leaf Col-0 no treatment / leaves
(CAGE, long days)		 Control for tissue data Developmental series; organs / tissues at different ages -0.52  
-0.33  
36 Uniconazole 3 h Col-0 10 µM uniconazole /
seedling		 Mock 3 h Effect of GA inhibitors on seedlings 0.51  
-0.05  
37 Mutant arf2 (etiol) arf2 mock / etiol seedling Col (etiol) GEO bulk 0.51  
0.37  
38 Uniconazole 12 h Col-0 10 µM uniconazole /
seedling		 Mock 12 h Effect of GA inhibitors on seedlings 0.50  
-0.06  
39 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 0.50  
0.26  
40 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 1 h Basic hormone treatment of seedlings 0.48  
0.74  
41 PNO8 3 h Col-0 1 µM PNO8 /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.46  
0.64  
42 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.45  
0.51  
43 Mutant bri1 bri1-5 no treatment / seedling Ws-2 Comparison of plant hormone related mutant -0.42  
-0.52  
44 Ibuprofen 3 h Col-0 10 µM Ibuprofen /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.40  
0.76  
45 FarRed Light 45min Col-0 continuous far red light
/ seedlings		 White Light 45min Light treatments -0.31  
-0.63  
46 E.orontii Infection 6 h Col-0 E.orontii Infection 6 h
/ leaves		 Uninfection 6 h Elicitor treatments 0.29  
-0.52  
47 Mutant arf19-1 arf19-1 mock / seedling Col GEO bulk 0.16  
0.66  
48 Mutant lwd1_lwd2 lwd1lwd2 no treatment / shoot Wildtype for phy mutants GEO bulk 0.11  
0.59  
49 Methyl Jasmonate 0.5 h Col-0 10 µM MJ / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.08  
0.57