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Wounding Stress3 h (shoot)
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 1.00  
1.00  
2 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.76  
0.50  
3 Mutant ap2-6(flower) ap2-6 no treatment / flower
stage 12; no sepals or
petals 		Flowers stage12 Developmental series; organs / tissues at different ages -0.71  
-0.18  
4 Mutant iaa17-6 (IAA) iaa17-6 5 µM IAA / seedling Col (IAA) GEO bulk 0.70  
0.16  
5 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.67  
0.73  
6 P.syringae vir 4 h (leaf) Col-0 P.syringae vir 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.66  
0.27  
7 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.65  
0.39  
8 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals		 Control for tissue data Developmental series; organs / tissues at different ages 0.64  
0.29  
9 Salt Stress 24 h (shoot) Col-0 salt stress (150 mM
NaCl) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.62  
0.40  
10 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.59  
0.62  
11 Mutant lfy-12(flower) lfy-12 no treatment / flower
stage 12; shoot
characteristics; most
organs leaf-like		 Flowers stage12 Developmental series; organs / tissues at different ages -0.59  
-0.03  
12 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves		 Mock 4 h (leaf) Elicitor treatments 0.57  
0.63  
13 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.56  
0.34  
14 Mutant iaa17-6 iaa17-6 mock / seedling Col GEO bulk 0.56  
0.40  
15 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.52  
0.56  
16 OPDA 4 h Col 75 µM OPDA /
seedling		 Col-0 GEO bulk 0.51  
0.50  
17 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.50  
0.64  
18 Rosette leaf No2 Col-0 no treatment / rosette
leaf #4		 Control for tissue data Developmental series; organs / tissues at different ages 0.50  
0.27  
19 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves		 Mock 4 h (leaf) Elicitor treatments 0.48  
0.66  
20 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.47  
0.52  
21 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 1 h Basic hormone treatment of seedlings 0.41  
0.50  
22 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.40  
0.50  
23 AvrRpm1 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato avrRpm1 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.37  
0.56  
24 Prohexadione 3 h Col-0 10 µM prohexadione /
seedling		 Mock 3 h Effect of GA inhibitors on seedlings 0.36  
0.51  
25 Methyl Jasmonate 3 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 3 h Basic hormone treatment of seedlings 0.33  
0.63  
26 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.26  
0.50  
27 Mutant coi1(leaf) coi1 no treatment / leaves Col-0 (leaf) GEO bulk -0.26  
-0.50  
28 2,4,6-trichlorophenoxyacetic acid 3 h Col-0 10 µM 2,4,6T /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.24  
0.54  
29 UV Stress 24 h (shoot) Col-0 UV-B stress (15 min 1.8
W/m2 Philips TL40W/12;
thereafter recovery) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.08  
0.50  
30 Imbibed 1 h (seed) Col-0 imbibed seeds (water) /
seeds		 Dry seed Time course of early seed germination 0.07  
0.60