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Methyl Jasmonate 3 h
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Methyl Jasmonate 3 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 3 h Basic hormone treatment of seedlings 1.00  
1.00  
2 OPDA 4 h Col 75 µM OPDA /
seedling		 Col-0 GEO bulk 0.87  
0.76  
3 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 1 h Basic hormone treatment of seedlings 0.81  
0.87  
4 Methyl Jasmonate 0.5 h Col-0 10 µM MJ / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.73  
0.87  
5 Mutant nph4-1_arf19-1 (IAA) nph4-1 arf19-1 5 µM IAA / seedling Col (IAA) GEO bulk 0.71  
0.39  
6 Mutant tga2_5_6 tga2 5 6 mock / seedling Col-0 GEO bulk 0.65  
-0.31  
7 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 0.63  
0.33  
8 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots		 Stress mock 24 h (root) Stress treatments 0.62  
0.21  
9 Mutant nph4-1 (IAA) nph4-1 5 µM IAA / seedling Col (IAA) GEO bulk 0.61  
0.25  
10 Prohexadione 12 h Col-0 10 µM prohexadione /
seedling		 Mock 12 h Effect of GA inhibitors on seedlings 0.57  
0.18  
11 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.55  
0.19  
12 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.55  
0.63  
13 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.55  
0.34  
14 Mutant nph4-1 nph4-1 mock / seedling Col GEO bulk 0.53  
0.37  
15 Mutant nph4-1_arf19-1 nph4-1 arf19-1 mock / seedling Col GEO bulk 0.53  
0.45  
16 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.52  
0.25  
17 Stem 2ndinternode Col-0 no treatment / stem, 2nd
internode		 Control for tissue data Developmental series; organs / tissues at different ages -0.52  
-0.10  
18 Drought Stress 24 h (shoot) Col-0 drought (15 min. dry air
then further incubation
in closed vessel) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.51  
0.15  
19 Mutant ap3-6(flower) ap3-6 no treatment / flower
stage 12; no petals or
stamens		 Flowers stage12 Developmental series; organs / tissues at different ages -0.51  
-0.07  
20 Prohexadione 3 h Col-0 10 µM prohexadione /
seedling		 Mock 3 h Effect of GA inhibitors on seedlings 0.50  
-0.02  
21 Mutant hy5 (High Light) hy5 high light: 1000
µmol quanta m-2 s-1
/ seedling		 Col-0 (High Light) GEO bulk -0.50  
-0.16  
22 Mutant hy5 hy5 Continuous white light /
seedling		 Col-0 GEO bulk -0.50  
-0.18  
23 Mutant coi1(leaf) coi1 no treatment / leaves Col-0 (leaf) GEO bulk -0.45  
-0.72  
24 Mutant iaa5_6_19 iaa5 iaa6 iaa19 mock / seedling Col GEO bulk 0.23  
0.61  
25 Ibuprofen 3 h Col-0 10 µM Ibuprofen /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.16  
0.51