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Methyl Jasmonate 0.5 h
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Methyl Jasmonate 0.5 h Col-0 10 µM MJ / seedling Mock 0.5 h Basic hormone treatment of seedlings 1.00  
1.00  
2 Methyl Jasmonate 1 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 1 h Basic hormone treatment of seedlings 0.89  
0.91  
3 Methyl Jasmonate 3 h Col-0 10 µM Metyl
Jasmonate / seedling		 Mock 3 h Basic hormone treatment of seedlings 0.87  
0.73  
4 OPDA 4 h Col 75 µM OPDA /
seedling		 Col-0 GEO bulk 0.81  
0.65  
5 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots		 Stress mock 24 h (root) Stress treatments 0.72  
0.17  
6 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.72  
0.14  
7 Mutant tga2_5_6 tga2 5 6 mock / seedling Col-0 GEO bulk 0.70  
-0.05  
8 Selenate (root) WS Selenate 40 µM /
root		 Ws (root) GEO bulk 0.68  
0.44  
9 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.67  
0.26  
10 Mutant coi1(leaf) coi1 no treatment / leaves Col-0 (leaf) GEO bulk -0.67  
-0.46  
11 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.66  
0.37  
12 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.65  
0.23  
13 Cycloheximide 3 h Col-0 10 µM CHX /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.63  
0.32  
14 DC3000 hrcC 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 hrcC-
harvested after 2h /
leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection -0.63  
-0.29  
15 Mutant ap3-6(flower) ap3-6 no treatment / flower
stage 12; no petals or
stamens		 Flowers stage12 Developmental series; organs / tissues at different ages -0.63  
-0.23  
16 Mutant iaa17-6 iaa17-6 mock / seedling Col GEO bulk 0.62  
0.31  
17 Mutant cry1 (High Light) cry1 high light: 1000
µmol quanta m-2 s-1
/ seedling		 Col-0 (High Light) GEO bulk -0.61  
0.18  
18 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.57  
0.08  
19 Mutant phyA (Dark) phyA Dark / seedling Wild type(Dark) GEO bulk 0.56  
0.20  
20 ACC 0.5 h Col-0 10 µM ACC / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.55  
0.62  
21 Prohexadione 12 h Col-0 10 µM prohexadione /
seedling		 Mock 12 h Effect of GA inhibitors on seedlings 0.55  
0.18  
22 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.55  
0.23  
23 Mutant ufo-1(flower) ufo-1 no treatment / flower
stage 12; filamentous
organs in whorls two and
three 		Flowers stage12 Developmental series; organs / tissues at different ages -0.52  
-0.26  
24 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.50  
0.05  
25 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.50  
0.06  
26 Expanding leaf Col-0 no treatment / leaves
(CAGE, long days)		 Control for tissue data Developmental series; organs / tissues at different ages -0.50  
-0.12  
27 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.50  
0.17  
28 Mutant iaa5_6_19 iaa5 iaa6 iaa19 mock / seedling Col GEO bulk 0.46  
0.65  
29 ABA 0.5 h Col-0 10 µM ABA / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.40  
0.73  
30 PNO8 3 h Col-0 1 µM PNO8 /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.02  
-0.51