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Cycloheximide 3 h
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Cycloheximide 3 h Col-0 10 µM CHX /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 1.00  
1.00  
2 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.73  
0.76  
3 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.73  
0.63  
4 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.71  
0.70  
5 Mutant siz1-3 (Drought) siz1-3 Drought / not
identified		 Col-0 (Drought) GEO bulk 0.71  
0.58  
6 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.67  
0.69  
7 Selenate (root) WS Selenate 40 µM /
root		 Ws (root) GEO bulk 0.65  
0.66  
8 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.64  
0.58  
9 2,3,5-Triiodobenzoic acid3 h Col-0 10 µM TIBA /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.63  
0.74  
10 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.61  
0.76  
11 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.60  
0.46  
12 Cold Stress 24 h (root) Col-0 cold stress (4˚) /
roots		 Stress mock 24 h (root) Stress treatments 0.59  
0.43  
13 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves		 Mock 4 h (leaf) Elicitor treatments 0.58  
0.66  
14 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.57  
0.64  
15 AvrRpm1 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato avrRpm1 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.55  
0.67  
16 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves		 Mock 4 h (leaf) Elicitor treatments 0.52  
0.60  
17 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.52  
0.47  
18 Wounding Stress3 h (root) Col-0 wounding (punctured with
pins at beginning of
treatment) / roots		 Stress mock 3 h (root) Stress treatments -0.51  
-0.45  
19 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.47  
0.55  
20 Mutant siz1-3 siz1-3 mock / not identified Col-0 GEO bulk 0.45  
0.52  
21 IAA 0.5 h Col-0 1 µM IAA / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.44  
0.54  
22 Fe starvation 72 h Col Fe starvation / whole
roots		 Control GEO bulk 0.42  
0.52  
23 IAA 1 h Col-0 1 µM IAA / seedling Mock 1 h Basic hormone treatment of seedlings 0.41  
0.65  
24 IAA 3 h Col-0 1 µM IAA / seedling Mock 3 h Basic hormone treatment of seedlings 0.40  
0.67  
25 Mutant arf2 (etiol) arf2 mock / etiol seedling Col (etiol) GEO bulk 0.39  
0.50  
26 Mutant axr3-1 (IAA) axr3-1 5 µM IAA / seedling Col (IAA) GEO bulk 0.34  
0.54  
27 Red Light 4 h Col-0 continuous Red Light /
seedlings		 White Light 4 h Light treatments 0.33  
0.50  
28 Methyl Jasmonate 0.5 h Col-0 10 µM MJ / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.32  
0.63  
29 DC3000 hrcC 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 hrcC-
harvested after 2h /
leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.31  
0.53  
30 ACC 0.5 h Col-0 10 µM ACC / seedling Mock 0.5 h Basic hormone treatment of seedlings 0.24  
0.50  
31 Blue Light 4 h Col-0 continuous Blue Light /
seedlings		 White Light 4 h Light treatments 0.20  
-0.58  
32 -Sulfate 24 h Col-0 0 µM sulfate / root Mock 24 h (1500uM sulfate) Response to sulfate limitation 0.14  
0.56  
33 Prohexadione 3 h Col-0 10 µM prohexadione /
seedling		 Mock 3 h Effect of GA inhibitors on seedlings 0.06  
0.59