Score |
Experiment |
Genotype |
Treatment / Tissue |
Control Experiment |
Experimental Category |
Correlation |
Gene list |
1 |
Methyl Jasmonate 1 h |
Col-0 |
10 µM Metyl Jasmonate / seedling |
Mock 1 h |
Basic hormone treatment of seedlings |
1.00 
1.00
|
|
2 |
Methyl Jasmonate 0.5 h |
Col-0 |
10 µM MJ / seedling |
Mock 0.5 h |
Basic hormone treatment of seedlings |
0.91 
0.89
|
|
3 |
Methyl Jasmonate 3 h |
Col-0 |
10 µM Metyl Jasmonate / seedling |
Mock 3 h |
Basic hormone treatment of seedlings |
0.87 
0.81
|
|
4 |
OPDA 4 h |
Col |
75 µM OPDA / seedling |
Col-0 |
GEO bulk |
0.81 
0.68
|
|
5 |
B.cinerea 18 h infection |
CS6673 |
B. cinerea infection / leaf |
Mock 18 h |
Botrytis cinerea infection |
0.74 
0.48
|
|
6 |
AgNO3 3 h |
Col-0 |
10 µM AgNO3 / seedling |
Mock 3 h |
Effect of ethylene inhibitors on seedlings |
0.71 
0.44
|
|
7 |
P. infestans 6 h (leaf) |
Col-0 |
P. infestans 6 h (leaf) / leaves |
Mock 6 h (leaf) |
Elicitor treatments |
0.69 
0.51
|
|
8 |
Mutant coi1(leaf) |
coi1 |
no treatment / leaves |
Col-0 (leaf) |
GEO bulk |
-0.64 
-0.54
|
|
9 |
Selenate (root) |
WS |
Selenate 40 µM / root |
Ws (root) |
GEO bulk |
0.63 
0.43
|
|
10 |
Mutant tga2_5_6 |
tga2 5 6 |
mock / seedling |
Col-0 |
GEO bulk |
0.62 
0.01
|
|
11 |
Mutant gh3.5-1D (AvrRpt2) |
gh3.5-1D |
Pst DC3000(avrRpt2) / leaves |
Col-0 (AvrRpt2) |
GEO bulk |
0.62 
0.47
|
|
12 |
Prohexadione 12 h |
Col-0 |
10 µM prohexadione / seedling |
Mock 12 h |
Effect of GA inhibitors on seedlings |
0.60 
0.40
|
|
13 |
DC3000 hrcC 2 h (leaf) |
Col-0 |
infiltrated with 108 cfu/ml P. syringae pv. tomato DC3000 hrcC- harvested after 2h / leaves |
Mock 2 h (leaf) |
Pseudomonas syringae pv. tomato or pv. phaseolicola infection |
-0.56 
-0.19
|
|
14 |
Mutant iaa17-6 |
iaa17-6 |
mock / seedling |
Col |
GEO bulk |
0.55 
0.73
|
|
15 |
K starvation (shoot) |
ws-2 |
K starvation / shoot |
Ws (shoot) |
GEO bulk |
0.55 
0.17
|
|
16 |
ARR22-ox (t-zeatin 3 h) |
ARR22-ox |
20 µM t-zeatin / seedling |
Col-0 (t-zeatin 3 h) |
Cytokinin treatment of seedlings |
0.53 
0.36
|
|
17 |
Salt Stress 24 h (root) |
Col-0 |
salt stress (150 mM NaCl) / roots |
Stress mock 24 h (root) |
Stress treatments |
0.52 
0.26
|
|
18 |
Mutant cry1 (High Light) |
cry1 |
high light: 1000 µmol quanta m-2 s-1 / seedling |
Col-0 (High Light) |
GEO bulk |
-0.52 
-0.26
|
|
19 |
Shoot apex vegetative &Young leaves |
Col-0 |
no treatment / shoot apex, vegetative and young leaves |
Control for tissue data |
Developmental series; organs / tissues at different ages |
0.51 
0.02
|
|
20 |
Mutant phyA (Dark) |
phyA |
Dark / seedling |
Wild type(Dark) |
GEO bulk |
0.51 
0.13
|
|
21 |
Estradiol4 days |
Col |
Estradiol 10 µM / seedling |
Col |
GEO bulk |
-0.51 
0.24
|
|
22 |
Wounding Stress3 h (shoot) |
Col-0 |
wounding (punctured with pins at beginning of treatment) / shoots |
Stress mock 3 h (shoot) |
Stress treatments |
0.50 
0.41
|
|
23 |
Expanding leaf |
Col-0 |
no treatment / leaves (CAGE, long days) |
Control for tissue data |
Developmental series; organs / tissues at different ages |
-0.50 
-0.25
|
|
24 |
Mutant cry1 |
cry1 |
Continuous white light / seedling |
Col-0 |
GEO bulk |
-0.50 
-0.24
|
|
25 |
Mutant iaa5_6_19 |
iaa5 iaa6 iaa19 |
mock / seedling |
Col |
GEO bulk |
0.48 
0.57
|
|
26 |
Mutant arf2-6 |
arf2-6 |
mock / seedling |
Col |
GEO bulk |
-0.29 
-0.50
|
|
27 |
ACC 1 h |
Col-0 |
10 µM ACC / seedling |
Mock 1 h |
Basic hormone treatment of seedlings |
0.27 
0.50
|
|
28 |
ABA 1 h |
Col-0 |
10 µM ABA / seedling |
Mock 1 h |
Basic hormone treatment of seedlings |
0.25 
0.52
|
|
29 |
P.syringae AvrRpt2 4 h (leaf) |
Col-0 |
P.syringae avrRpt2 4 h (leaf) / leaves |
Mock 4 h (leaf) |
Elicitor treatments |
0.23 
0.52
|
|
30 |
Ibuprofen 3 h |
Col-0 |
10 µM Ibuprofen / seedlings |
Mock 3 h |
Effect of other inhibitors on seedlings |
0.21 
0.57
|
|