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DC3000 2 h (leaf)
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 1.00  
1.00  
2 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.91  
0.87  
3 AvrRpm1 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato avrRpm1 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.80  
0.85  
4 DC3000 hrcC 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 hrcC-
harvested after 2h /
leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.78  
0.85  
5 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.78  
0.77  
6 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.77  
0.78  
7 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.75  
0.77  
8 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves		 Mock 4 h (leaf) Elicitor treatments 0.73  
0.85  
9 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.72  
0.71  
10 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals		 Control for tissue data Developmental series; organs / tissues at different ages 0.71  
0.48  
11 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.69  
0.49  
12 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.69  
0.64  
13 Proximalhalf (leaf7) Col-0 no treatment / leaf 7,
proximal half		 Control for tissue data Developmental series; organs / tissues at different ages -0.67  
-0.27  
14 Senescing leaf Col-0 no treatment / senescing
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.66  
0.46  
15 ARR22-ox ARR22-ox no treatment / seedling Col-0 Cytokinin treatment of seedlings 0.65  
0.35  
16 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.64  
0.59  
17 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 0.64  
0.50  
18 Petiol (leaf7) Col-0 no treatment / leaf 7,
petiole		 Control for tissue data Developmental series; organs / tissues at different ages -0.64  
-0.32  
19 Mature pollen Col-0 no treatment / mature
pollen		 Control for tissue data Developmental series; organs / tissues at different ages 0.62  
0.31  
20 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.62  
0.57  
21 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.61  
0.54  
22 Mutant siz1-3 (Drought) siz1-3 Drought / not
identified		 Col-0 (Drought) GEO bulk 0.60  
0.46  
23 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves		 Mock 4 h (leaf) Elicitor treatments 0.59  
0.74  
24 Mutant siz1-3 siz1-3 mock / not identified Col-0 GEO bulk 0.59  
0.51  
25 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.58  
0.62  
26 ARR21C-ox ARR21C-ox no treatment / seedling Col-0 ARR21C overexpression 0.57  
0.42  
27 Blue Light 4 h Col-0 continuous Blue Light /
seedlings		 White Light 4 h Light treatments 0.54  
0.43  
28 Distal half (leaf7) Col-0 no treatment / leaf 7,
distal half		 Control for tissue data Developmental series; organs / tissues at different ages -0.54  
-0.15  
29 Flowers stage15 Col-0 no treatment / flowers
stage 15		 Control for tissue data Developmental series; organs / tissues at different ages 0.53  
0.30  
30 2,3,5-Triiodobenzoic acid3 h Col-0 10 µM TIBA /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.51  
0.65  
31 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling		 Col-0 GEO bulk 0.51  
0.57  
32 B.cinerea 18 h infection CS6673 B. cinerea infection /
leaf		 Mock 18 h Botrytis cinerea infection 0.50  
0.57  
33 PNO8 3 h Col-0 1 µM PNO8 /
seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.49  
0.58  
34 Mutant cry1 (High Light) cry1 high light: 1000
µmol quanta m-2 s-1
/ seedling		 Col-0 (High Light) GEO bulk -0.41  
-0.51  
35 Brz220 12 h Col-0 10 µM BRZ220 /
seedling		 Mock 12 h Effect of brassinosteroid inhibitors on seedlings 0.40  
0.51  
36 Mutant coi1(leaf) coi1 no treatment / leaves Col-0 (leaf) GEO bulk -0.39  
-0.65  
37 2,4,6-trichlorophenoxyacetic acid 3 h Col-0 10 µM 2,4,6T /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.30  
0.50  
38 Dark 4 h pls RedLight 1min Col-0 1 min. red light pulse
followed by 4 h of
darkness / seedlings		 Dark 4 h Light treatments -0.16  
-0.53  
39 Estradiol4 days Col Estradiol 10 µM /
seedling		 Col GEO bulk 0.15  
0.50