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Sepals stage15
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Score Experiment Genotype Treatment / Tissue Control Experiment Experimental Category Correlation Gene list
1 Sepals stage15 Col-0 no treatment / flowers
stage 15, sepals		 Control for tissue data Developmental series; organs / tissues at different ages 1.00  
1.00  
2 Senescing leaf Col-0 no treatment / senescing
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.80  
0.82  
3 Flowers stage15 Col-0 no treatment / flowers
stage 15		 Control for tissue data Developmental series; organs / tissues at different ages 0.78  
0.74  
4 Osmotic Stress 24 h (shoot) Col-0 osmotic stress (300 mM
mannitol) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.70  
0.75  
5 Petals stage15 Col-0 no treatment / flowers
stage 15, petals		 Control for tissue data Developmental series; organs / tissues at different ages 0.70  
0.76  
6 Stamen stage15 Col-0 no treatment / flowers
stage 15 stamen		 Control for tissue data Developmental series; organs / tissues at different ages 0.70  
0.75  
7 Cauline leaves Col-0 no treatment / cauline
leaves		 Control for tissue data Developmental series; organs / tissues at different ages 0.63  
0.74  
8 Shoot apex vegetative &Young leaves Col-0 no treatment / shoot
apex, vegetative and
young leaves		 Control for tissue data Developmental series; organs / tissues at different ages -0.62  
-0.68  
9 K starvation (shoot) ws-2 K starvation / shoot Ws (shoot) GEO bulk 0.62  
0.76  
10 Salt Stress 24 h (root) Col-0 salt stress (150 mM
NaCl) / roots		 Stress mock 24 h (root) Stress treatments 0.59  
0.57  
11 ARR22-ox (t-zeatin 3 h) ARR22-ox 20 µM t-zeatin /
seedling		 Col-0 (t-zeatin 3 h) Cytokinin treatment of seedlings 0.58  
0.59  
12 Mutant ap2-6(flower) ap2-6 no treatment / flower
stage 12; no sepals or
petals 		Flowers stage12 Developmental series; organs / tissues at different ages -0.58  
-0.61  
13 Osmotic Stress 24 h (root) Col-0 osmotic stress (300 mM
mannitol) / roots		 Stress mock 24 h (root) Stress treatments 0.57  
0.55  
14 GST NPP1 4 h (leaf) Col-0 infiltrated with 1
µM GST-NPP1 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.57  
0.72  
15 Shoot apex vegetative Col-0 no treatment / shoot
apex, vegetative		 Control for tissue data Developmental series; organs / tissues at different ages -0.57  
-0.62  
16 P. infestans 6 h (leaf) Col-0 P. infestans 6 h (leaf)
/ leaves		 Mock 6 h (leaf) Elicitor treatments 0.56  
0.68  
17 HairpinZ 4 h (leaf) Col-0 infiltrated with 10
µM HrpZ / leaves		 Mock 4 h (leaf) Elicitor treatments 0.55  
0.70  
18 Flagellin 4 h (leaf) Col-0 infiltrated with 1
µM Flg22 / leaves		 Mock 4 h (leaf) Elicitor treatments 0.55  
0.68  
19 Shoot apex transition (before bolting) Col-0 no treatment / shoot
apex, transition (before
bolting)		 Control for tissue data Developmental series; organs / tissues at different ages -0.53  
-0.55  
20 Mutant gh3.5-1D (AvrRpt2) gh3.5-1D Pst DC3000(avrRpt2) /
leaves		 Col-0 (AvrRpt2) GEO bulk 0.53  
0.72  
21 Mature pollen Col-0 no treatment / mature
pollen		 Control for tissue data Developmental series; organs / tissues at different ages 0.52  
0.52  
22 Mutant siz1-3 (Drought) siz1-3 Drought / not
identified		 Col-0 (Drought) GEO bulk 0.52  
0.62  
23 Phaseolicola 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
phaseolicola harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.51  
0.67  
24 DC3000 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato DC3000 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.48  
0.71  
25 P.syringae AvrRpt2 4 h (leaf) Col-0 P.syringae avrRpt2 4 h
(leaf) / leaves		 Mock 4 h (leaf) Elicitor treatments 0.47  
0.62  
26 Phytoprostane A1 4 h Col 75 µM phytoprostane
A1 / seedling		 Col-0 GEO bulk 0.45  
0.62  
27 Mutant lfy-12(flower) lfy-12 no treatment / flower
stage 12; shoot
characteristics; most
organs leaf-like		 Flowers stage12 Developmental series; organs / tissues at different ages -0.43  
-0.50  
28 UV Stress 24 h (shoot) Col-0 UV-B stress (15 min 1.8
W/m2 Philips TL40W/12;
thereafter recovery) /
shoots		 Stress mock 24 h (shoot) Stress treatments 0.43  
0.63  
29 Selenate (shoot) WS Selenate 40 µM /
shoot		 Ws (shoot) GEO bulk 0.43  
0.60  
30 Lipopolysaccaride4 h (leaf) Col-0 infiltrated with 100
µg/ml LPS / leaves		 Mock 4 h (leaf) Elicitor treatments 0.42  
0.70  
31 Salt Stress 24 h (shoot) Col-0 salt stress (150 mM
NaCl) / shoots		 Stress mock 24 h (shoot) Stress treatments 0.41  
0.57  
32 GST 4 h (leaf) Col-0 infiltrated with 1µM
GST / leaves		 Mock 4 h (leaf) Elicitor treatments 0.41  
0.67  
33 Mutant iaa17-6 iaa17-6 mock / seedling Col GEO bulk 0.41  
0.57  
34 ABA 3 h Col-0 10 µM ABA / seedling Mock 3 h Basic hormone treatment of seedlings 0.39  
0.64  
35 AgNO3 3 h Col-0 10 µM AgNO3 /
seedling		 Mock 3 h Effect of ethylene inhibitors on seedlings 0.38  
0.53  
36 Mutant siz1-3 siz1-3 mock / not identified Col-0 GEO bulk 0.37  
0.64  
37 2,3,5-Triiodobenzoic acid3 h Col-0 10 µM TIBA /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.30  
0.59  
38 Wounding Stress3 h (shoot) Col-0 wounding (punctured with
pins at beginning of
treatment) / shoots		 Stress mock 3 h (shoot) Stress treatments 0.29  
0.64  
39 AvrRpm1 2 h (leaf) Col-0 infiltrated with 108
cfu/ml P. syringae pv.
tomato avrRpm1 harvested
after 2h / leaves		 Mock 2 h (leaf) Pseudomonas syringae pv. tomato or pv. phaseolicola infection 0.26  
0.64  
40 Salicylic Acid 3 h Col-0 10µM salicylic acid
/ seedlings		 Mock 3 h Effect of other inhibitors on seedlings 0.25  
0.60  
41 Brz220 12 h Col-0 10 µM BRZ220 /
seedling		 Mock 12 h Effect of brassinosteroid inhibitors on seedlings 0.23  
0.55  
42 ABA 1 h Col-0 10 µM ABA / seedling Mock 1 h Basic hormone treatment of seedlings 0.21  
0.73  
43 2,4,6-trichlorophenoxyacetic acid 3 h Col-0 10 µM 2,4,6T /
seedling		 Mock 3 h Effect of auxin inhibitors on seedlings 0.17  
0.60  
44 t-zeatin 3 h Col-0 1 µM t-zeatin /
seedling		 Mock 3 h Basic hormone treatment of seedlings -0.06  
-0.59  
45 Mutant sav3-2 (SH) sav3-2 Low R:FR light /
seedling		 Col-0 (SH) GEO bulk 0.04  
0.56